Etheostoma cragini (Arkansas darter): 117958912
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Entry
117958912 CDS
T07493
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117958912 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117958912 (trim32)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117958912 (trim32)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117958912 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Vgb_lyase
zf-C3HC4_4
zf-RING_4
zf-B_box
zf-RING_11
Prok-RING_4
Haem_bd
DUF3117
Motif
Other DBs
NCBI-GeneID:
117958912
NCBI-ProteinID:
XP_034751558
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All DBs
Position
16:15665326..15669493
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AA seq
684 aa
AA seq
DB search
MEATSSQLDPDLIREVLECPICLETYNQDQMRPKLLQCGHTVCRQCLEKLLANTINGVRC
PFCSKVSRMSSISQLADNLTVLKILDCTTCCSAATAALMCKSCCNRLPRQYCHDCATVLC
ELCKGEGHLHQGHSVQPIRVAAEQRRKELGGKLTSLRDVMGNIQKKKTAIENISKSLRLK
YQAVQQDYTSAELRLQEELSRSRRTFTASMAEVDKLNGQVLEEQTYLLNIAEVKVVSRCD
YLRMLVRQSDIALLKDDGEGNDDEELDLRSSLPIMFQLQEPELVRTEHSKPIEVGQVTTN
TYTVNTEDEESGLEISLEGYVESEAVTIGATGGGRGAMDHYRDIDMLAAVEDAACGSPGS
FKSKSMDAGGGSPGGAGASAAPPVCQFVKKMGCKGTLPGMFNLPVGICVAQQGEVLVADR
GNYRIQIFNRKGFQREIRRNASSIDNFVLSFLGADLPNLIPLSIAVTPQGLIGVTDNYDN
SVKVYTMDGHCVACHKNQLIKPWGIAAMPSGQFVVSDVEGGKLWCITVDRNLGVVSYNRL
CSAVRPKFVTCDAAGTVYFTQGLALNFEKRHNEPHLEGGFSIGSVDTDGQLGKQLSHFFS
ETEDFRCITGMCVDVNGDLLVTDSGRKEILQFPKEGGFKILIHEGLTCPVGVATTHKGQL
LVLDCWDHCVKVYTYIQRRHSSTS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaacatcttcccagctggacccggatctaataagggaggttcttgaatgccct
atctgcctggagacctacaaccaggatcaaatgaggcccaaactcctgcagtgtggtcac
acagtgtgccggcagtgtctagagaagctgttggctaatactataaacggtgtgcgctgc
cccttctgtagcaaggtgtcccgtatgagcagtatctcccaattggccgataatctcact
gtgctcaagatcctagattgtactacatgctgcagtgctgctactgctgccctgatgtgc
aagtcctgctgcaaccgcctgccacgacagtactgccatgattgtgctacagtcctctgt
gagctctgtaaaggtgagggccacctgcatcaaggccattcagtccagccaattagggtg
gctgctgaacagcgtcgtaaagaacttggtggaaagctgacttctctgcgtgatgttatg
ggcaatattcagaagaaaaagacagctattgaaaacatctccaagtccttgagactaaag
taccaggcagtgcagcaggactatacttcagctgagctacgtcttcaagaggaactcagc
aggtctcgaaggacattcacagcttccatggcagaagtggacaagcttaatggacaagtc
ctggaggagcagacgtatctcctcaacattgcagaggtaaaagtggtgtcacgctgtgat
tatctgagaatgcttgtgaggcagagcgatattgctttgctaaaggatgatggcgaaggc
aatgatgatgaagagctggatttaaggagcagcttgcccatcatgtttcagctgcaagag
ccagagctggtcagaacagaacactctaaacctatagaagtgggccaagtgaccacaaat
acttatactgtcaatacagaggatgaggagagcggtttggagatatcacttgagggttat
gtagagagtgaagctgttacaataggggctactggtggtggaaggggggcaatggatcat
taccgagatattgacatgctagcagctgtagaggatgcagcatgtggttcaccaggcagc
tttaagtcaaaatctatggatgcaggcgggggatcacctggaggagctggggcaagtgca
gcgccgccagtctgccagtttgtgaagaagatgggctgcaagggaacactacctggcatg
ttcaatttaccagtcggcatttgtgtagcacaacaaggtgaggtcttggtggctgaccgt
ggcaactaccgcatccagatatttaatcgtaaaggtttccagcgtgaaatccgccgtaat
gccagtagcattgacaactttgtcttgagcttccttggggctgatctgcctaacctcatc
cccttatccattgctgtcactcctcaaggcctgatcggggtcactgacaactatgataac
tcagttaaagtctacactatggatggacactgtgtggcttgccataagaaccagctgatt
aaaccctggggcattgctgcaatgccatcaggtcagtttgtggtgtcagatgtggaaggt
ggcaagctctggtgtatcacagtggaccgcaatctaggtgtggtcagctacaatcgattg
tgctctgctgtgcggccaaagtttgtgacgtgtgatgcggctggaacagtctatttcacc
cagggactagccctgaattttgaaaaacgtcacaatgagccccatctggaaggtggcttt
tctattggctcagtggatacagacggccagctaggcaagcagctcagccatttcttctca
gagacggaggacttccgctgtatcaccggcatgtgtgtggatgtcaatggggatttgcta
gtaacggacagtggcaggaaagaaatcctccagtttcccaaagaaggtggattcaaaatt
cttatccatgaagggctgacctgccctgtgggagtggccaccacccacaaaggacaactg
cttgtgctggattgttgggaccactgtgtcaaggtctacacatacattcagaggaggcac
tcctctacttcatag
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