Etheostoma cragini (Arkansas darter): 117961339
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Entry
117961339 CDS
T07493
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117961339
04082 Neuroactive ligand signaling
117961339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117961339
Ion channels [BR:
ecra04040
]
Ligand-gated channels
GABA-A
117961339
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117961339
NCBI-ProteinID:
XP_034755812
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Position
18:complement(21837850..21854504)
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AA seq
472 aa
AA seq
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MPCYARFLVLLLCLILLGECRKHKSRKKRWSAPAENHKPGTPLSKKVADGTKSRKTKTSH
LLRIDEHDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPS
STNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTAA
CNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTS
RLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLG
ITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVRDGKDR
KLREKAREQSQTPCTCGMSHARTMMLDGTYSEADANSLAGYTRASMAAEDASEKQERMVV
HLSLDTEPPGTKKKGIRGFRIIQNTHAIDTYSRMIFPGAYILFNLIYWCVYC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgttacgccaggtttctggtcttgcttctgtgtctgatcctgctcggggagtgc
aggaaacacaaaagtaggaaaaagcgctggtccgcgccggcggagaaccacaagccgggc
actcctctgtcgaagaaggttgcagatggaaccaaatcccggaagacgaagaccagccac
cttctgcgcatagacgagcatgacttcaccatgaggcccgccttcgcaggtcccgctgtc
cctgttggagtggatgtgcaggtggagagcttggacagcatatcagaggtggacatggac
ttcaccatgaccctgtatctaaggcactactggaaggacgagaggcttgccttcccaagc
tccaccaacaagagcatgacatttgacgggcgcctggtgaagaaaatctgggtgcctgat
gtgttcttcgtccactccaagaggtctttcatccatgacaccaccactgaaaacatcatg
ctgcgggtgtttcccgacggtcatgtcttgtacagcctcagggttacagtaactgctgca
tgcaacatggacttcagtcgctttcctttggactcgcagacatgcacgcttgagctggag
agctatgcttacacagacgaagacctgatgctgtattggaaaagcggtgatgagtccctg
agcacggatgacaggatttctctgtctcagttcctcatccagaagtttcacactacttca
agactagctttctacagcagcacaggctggtacaaccgtctgtacatcaacttcacgctg
cggcgtcacatcttttttttcctgctgcagacctacttcccggccactctgatggtcatg
ctgtcctgggtgtccttctggatcgaccgcagggccgtccccgccagagtctcattaggt
ataaccacggtgctcaccatgtccaccatcatcactggagtcaacgcctccatgcccagg
gtctcctacatcaaagctgtggatatttacctctgggtcagttttgtctttgtcttcctg
tctgtgcttgaatacgctgccgtcaactacctgacgacggtgagggacggtaaggaccgc
aagctccgagaaaaagccagagaacagtcccagacaccctgcacctgtggcatgtcccac
gccaggaccatgatgctcgacgggacatacagcgaggcggatgccaacagcctggcaggg
tacacgagggcctccatggcagctgaggatgcgtcggaaaaacaggagcgaatggtagtg
catctctccctggacaccgagcccccggggaccaagaagaagggcatccgcggcttccgg
attatccagaacactcacgccattgacacctattctcgcatgatattccctggcgcctac
atcctgtttaacctgatctactggtgtgtgtactgctga
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