Escherichia coli O157 H7 Sakai (EHEC): ECs_5148
Help
Entry
ECs_5148 CDS
T00048
Symbol
hfq
Name
(RefSeq) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs02024
Quorum sensing
ecs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECs_5148 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECs_5148 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecs03019
]
ECs_5148 (hfq)
03036 Chromosome and associated proteins [BR:
ecs03036
]
ECs_5148 (hfq)
Messenger RNA biogenesis [BR:
ecs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ECs_5148 (hfq)
Chromosome and associated proteins [BR:
ecs03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ECs_5148 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-GeneID:
914061
NCBI-ProteinID:
NP_313175
UniProt:
P0A6X5
LinkDB
All DBs
Position
5254140..5254448
Genome browser
AA seq
102 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcctgaacgcactgcgtcgggaacgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaagggcaaatcgagtcttttgat
cagttcgtgatcctgttgaaaaacacggtcagccagatggtttacaagcacgcgatttct
actgttgtcccgtctcgcccggtttctcatcacagtaacaacgccggtggcggtaccagc
agtaactaccatcatggtagcagcgcgcagaatacttccgcgcaacaggacagcgaagaa
accgaataa
DBGET
integrated database retrieval system
