KEGG   Escherichia coli APEC O1 (APEC): APECO1_1415
Entry
APECO1_1415       CDS       T00425                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
ecv  Escherichia coli APEC O1 (APEC)
Pathway
ecv03030  DNA replication
ecv03430  Mismatch repair
ecv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ecv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    APECO1_1415 (holA)
   03430 Mismatch repair
    APECO1_1415 (holA)
   03440 Homologous recombination
    APECO1_1415 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecv03032]
    APECO1_1415 (holA)
   03400 DNA repair and recombination proteins [BR:ecv03400]
    APECO1_1415 (holA)
Enzymes [BR:ecv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     APECO1_1415 (holA)
DNA replication proteins [BR:ecv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     APECO1_1415 (holA)
DNA repair and recombination proteins [BR:ecv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     APECO1_1415 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C DNA_pol3_gamma3 BET
Other DBs
NCBI-ProteinID: ABJ00055
UniProt: A0A0H2YXJ9
LinkDB
Position
complement(654025..655056)
AA seq 343 aa
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD
WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMSEALNRLSQSQLRQ
AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgattcggttgtacccggaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgatcctctgttattgcaggaaagccaggacgctgttcgtcag
gtcgctgcggcgcaagggttcgaagaacaccacactttttccattgatcccaacaccgac
tggaatgcgattttttcgttatgccaggccatgagcctgtttgccagtcgacaaacgcta
ttgctgttgttacccgaaaacggaccgaatgcggcgatcaatgaacaacttctcacactc
accggacttctgcatgacgacctgctgttgatcgtccgcggtaataaattaagcaaagcg
caagaaaatgccgcctggtttactgctcttgcgaatcgcagcgtgcaggtgacctgtcag
acaccggagcaggctcagctgccccgctgggttgctgcgcgcgcaaaacagctcaactta
gaactggatgacgctgcaaatcaggtgctctgctactgttatgaaggtaacctgctggcg
ctggcccaggcactggagcgtttatcgctactctggccggacggcaaactgacattaccg
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggaaaaagtaagcgcgcgttgcatattcttcagcaactgcgtctggaaggc
agcgaaccggttattttgttgcgcacattacaacgtgaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataagcatcgggtatggcag
aaccgcaggggcatgatgagcgaggcgttaaatcgcttaagccagtcgcagttacgtcag
gccgtgcaactcctgacacgaacggaactcaccctcaaacaagattacggtcagtcagtg
tgggcagagcttgaagggttatctcttctgttgtgccataaacccctggcggacgtattt
atcgacggttga

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