Entry |
|
Symbol |
holA
|
Name |
(GenBank) DNA polymerase III subunit delta
|
KO |
|
Organism |
ecv Escherichia coli APEC O1 (APEC)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ecv00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APECO1_1415 (holA)
03430 Mismatch repair
APECO1_1415 (holA)
03440 Homologous recombination
APECO1_1415 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:ecv03032]
APECO1_1415 (holA)
03400 DNA repair and recombination proteins [BR:ecv03400]
APECO1_1415 (holA)
Enzymes [BR:ecv01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APECO1_1415 (holA)
DNA replication proteins [BR:ecv03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APECO1_1415 (holA)
DNA repair and recombination proteins [BR:ecv03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APECO1_1415 (holA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(654025..655056)
|
AA seq |
343 aa
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD
WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMSEALNRLSQSQLRQ
AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG |
NT seq |
1032 nt +upstreamnt +downstreamnt
atgattcggttgtacccggaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgatcctctgttattgcaggaaagccaggacgctgttcgtcag
gtcgctgcggcgcaagggttcgaagaacaccacactttttccattgatcccaacaccgac
tggaatgcgattttttcgttatgccaggccatgagcctgtttgccagtcgacaaacgcta
ttgctgttgttacccgaaaacggaccgaatgcggcgatcaatgaacaacttctcacactc
accggacttctgcatgacgacctgctgttgatcgtccgcggtaataaattaagcaaagcg
caagaaaatgccgcctggtttactgctcttgcgaatcgcagcgtgcaggtgacctgtcag
acaccggagcaggctcagctgccccgctgggttgctgcgcgcgcaaaacagctcaactta
gaactggatgacgctgcaaatcaggtgctctgctactgttatgaaggtaacctgctggcg
ctggcccaggcactggagcgtttatcgctactctggccggacggcaaactgacattaccg
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggaaaaagtaagcgcgcgttgcatattcttcagcaactgcgtctggaaggc
agcgaaccggttattttgttgcgcacattacaacgtgaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataagcatcgggtatggcag
aaccgcaggggcatgatgagcgaggcgttaaatcgcttaagccagtcgcagttacgtcag
gccgtgcaactcctgacacgaacggaactcaccctcaaacaagattacggtcagtcagtg
tgggcagagcttgaagggttatctcttctgttgtgccataaacccctggcggacgtattt
atcgacggttga |