Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_3690
Help
Entry
EcE24377A_3690 CDS
T00590
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ecw
Escherichia coli O139:H28 E24377A (ETEC)
Pathway
ecw02020
Two-component system
ecw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EcE24377A_3690 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EcE24377A_3690 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecw03021
]
EcE24377A_3690 (rpoN)
Transcription machinery [BR:
ecw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EcE24377A_3690 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ABV20611
UniProt:
A7ZSA1
LinkDB
All DBs
Position
3681874..3683307
Genome browser
AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRE
TQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDILESMGDEEIDIDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN
QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgccacagctccaa
caggcaattcgtctgttgcagttgtcgacgctggaacttcagcaggagctacagcaggcg
ctggagagtaatccgctgcttgagcaaatcgacactcatgaagaaatcgacacccgcgaa
acgcaagacagtgaaacgctggacaccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgctcgatgccagttgggacaccatttacaccgctggtacaccatccggcacc
agcggtgactacattgacgatgagctgccggtctatcagggcgaaacgacgcagaccttg
caggattacctgatgtggcaggtcgagctgacaccgttttccgacactgaccgcgctatt
gctacctctatcgtcgatgccgttgatgacaccggttatctgactgtcccgctggaagat
attctcgaaagtatgggcgatgaagagatcgacatcgacgaggttgaagccgtccttaag
cggatccaacggtttgatccggtcggtgtagcggcaaaagatctgcgtgactgcctgcta
atccaactctcccaattcgataaaaccacgccgtggctggaagaggccagattgatcatt
agcgatcatctcgatctgttagccaatcacgacttccgcactttaatgcgcgtcacgcgt
ctgaaagaagatgtgctgaaagaagccgtcaatctgatccagtcgctcgatccgcgcccc
gggcagtcgatccagactggcgaacctgagtatgtcattccagatgtgctggtgcgtaag
cataacggtcactggacagtagaactcaacagtgacagcattccgcgtctgcaaatcaac
cagcactacgcctcgatgtgcaataacgctcgcaatgatggtgacagccagtttatccgc
agcaatctgcaggatgccaaatggttgatcaagagtctggaaagccgtaacgatacgcta
ctgcgcgtgagtcgctgtatcgttgaacagcagcaagccttctttgagcaaggcgaagaa
tatatgaaaccgatggtactggccgatatcgcccaggctgtcgaaatgcatgaatcgacg
atatctcgcgtgaccacgcaaaaatacctgcatagtccacgaggcatttttgaactgaag
tatttcttttccagtcacgtcaataccgagggcggcggcgaagcttcctccacggcgatt
cgtgcgctggtgaagaaattaatcgcggcggaaaacccagcgaaaccgttgagcgacagc
aagttaacctctttgctgtcggaacaaggtatcatggtggcacgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccagcgtaaacagctcgtttga
DBGET
integrated database retrieval system
