Escherichia coli O152 H28 SE11 (commensal): ECSE_0443
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Entry
ECSE_0443 CDS
T00784
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ecy
Escherichia coli O152:H28 SE11 (commensal)
Pathway
ecy00900
Terpenoid backbone biosynthesis
ecy01100
Metabolic pathways
ecy01110
Biosynthesis of secondary metabolites
Module
ecy_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
ecy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ECSE_0443
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ecy01006
]
ECSE_0443
Enzymes [BR:
ecy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ECSE_0443
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ECSE_0443
Prenyltransferases [BR:
ecy01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ECSE_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Arm-DNA-bind_3
UbiA
Motif
Other DBs
NCBI-ProteinID:
BAG75967
UniProt:
A0A979GCY5
LinkDB
All DBs
Position
complement(481762..482661)
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AA seq
299 aa
AA seq
DB search
MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG
VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH
KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttccgcagcaactcgaagcctgcgttaagcaggccaaccaggcgctgagccgt
tttatcgccccactgccctttcagaacactcccgtggtcgaaaccatgcagtatggcgca
ttattaggtggtaagcgcctgcgaccttttctggtttatgccaccggtcatatgttcggc
gttagcacaaacacgctggacgcacccgctgccgccgtagagtgtatccacgcttactca
ttaattcatgatgatttaccggcgatggatgatgacgatctgcgtcgcggtttgccgacc
tgccatgtgaagtttggcgaagcaaacgcgattctcgctggcgacgctttacaaacgctg
gcgttctcgattctaagcgatgctgatatgccggaagtgtcggatcgcgacagaatttcg
atgatttctgaactggcgagcgccagcggtattgccggaatgtgcggtggtcaggcatta
gatttagacgcggaaggcaaacacgtacctctggacgcgcttgagcgtattcatcgtcat
aaaaccggcgcattgattcgcgccgccgttcgccttggtgcattaagcgccggagataaa
gggcgtcgtgctctgccagtactcgacaagtacgcagagagcatcggccttgccttccag
gttcaggatgacatcctggatgtggtaggagatactgcaacgttgggaaaacgccagggt
gccgaccagcaacttggtaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aagaaagcccgggatctgatcgacgatgcccgccagtcgctgaaacaactggctgaacaa
tcactcgatacctcggcactggaagcgctagcggactacatcatccagcgtaataaataa
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