Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_0194
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Entry
ECS88_0194 CDS
T00830
Symbol
rnhB
Name
(GenBank) ribonuclease HII, degrades RNA of DNA-RNA hybrids
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Pathway
ecz03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECS88_0194 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecz03032
]
ECS88_0194 (rnhB)
Enzymes [BR:
ecz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
ECS88_0194 (rnhB)
DNA replication proteins [BR:
ecz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
ECS88_0194 (rnhB)
Elongation factors (archaeal)
ECS88_0194 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
CAR01558
UniProt:
B7MBG4
LinkDB
All DBs
Position
209293..209889
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AA seq
198 aa
AA seq
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MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLVLCEE
IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPSM
AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT
EHHRRSFGPVKRALGLAS
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgtctatccgcacacgcagctggttgcgggtgtggatgaagtcggacgc
gggccgttagttggcgcggtcgtcaccgctgcggtgatccttgacccggcgcgcccaatt
gccgggctgaatgattccaaaaagctgagcgaaaaacgccgtctggtgctctgtgaagag
atcaaagagaaagcgttgagctggagtctgggccgcgcggaacctcacgaaatcgacgaa
ctgaatattttacatgcgaccatgctggcgatgcagcgtgccgtcgctggactgcatatt
gcgccggaatatgtgttgattgatggtaaccgctgcccgaaattaccgatgccttcgatg
gctgtggtgaaaggcgatagccgcgtaccggaaatcagtgccgcgtctatcctggcgaaa
gtgacgcgtgacgccgaaatggcagcgctggatattgttttcccgcaatatggttttgcc
caacacaaagggtatccaaccgcttttcatctggaaaaactggctgaacacggcgcgacc
gaacaccatcggcgcagctttgggcctgtcaaacgcgcactgggacttgcgtcctga
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