KEGG   Edaphobacter sp. 12200R-103: GWR55_17795
Entry
GWR55_17795       CDS       T06408                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
eda  Edaphobacter sp. 12200R-103
Pathway
eda00230  Purine metabolism
eda00240  Pyrimidine metabolism
eda01100  Metabolic pathways
eda01232  Nucleotide metabolism
Module
eda_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:eda00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    GWR55_17795
   00240 Pyrimidine metabolism
    GWR55_17795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eda03400]
    GWR55_17795
Enzymes [BR:eda01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     GWR55_17795
DNA repair and recombination proteins [BR:eda03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    GWR55_17795
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD T4SS Ribonuc_red_lgN Lebercilin
Other DBs
NCBI-ProteinID: QHS53356
LinkDB
Position
4290684..4293998
AA seq 1104 aa
MATASKKTTTAPASEQVAAQTAAASAKRAPGLTFSRHFTKQGVSPFDEVTWELRDAVIQD
FKGRTIFEQKDVEVPTDWSMTATNIVASKYLHGQLGTPERETGVRALITRVAESIRDWGM
ESGYFASTDDAEVFFAELSHLLINQKVAFNSPVWFNVGCDRLEPNSDAQNWHWNPHTCAV
EFSVTGYRKPQCSACFINSVQDSLDSILTLAKTEGMLFKWGSGTGSNLSNIRGSMETLSG
GGTASGPLSFMRGFDAFAGVIKSGGKTRRAAKMVILNVDHPDIIDFIECKQKEEAKAHSL
VAAGYDGSGPDSEAYSSIFFQNANNSVRVNDEFMAAVEADSTFATRTVKARTPVKEYRAR
DIMNKIAEATWLCGDPGMQYDTTINRWHTSKNTGRINASNPCSEYMFLDDSACNLASFNL
LKFLTPGGQFDVAAYRHAIAIVTTAMEIIVDAAGYPTENIAKNSHDYRPLGLGYANLGAL
LMAFGLPYDSDAGRDFAATVTSILCGDAYWQSSRIAEACPPLGAATPLTQQADRNTDANF
DGSNGACPGFYINREPFLDVIRMHRAEVNNIGKSKSSAEPFVAPQLDELIAASKDSWTGA
LAHGEKHGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDLALVKYKKLVGGGMIKIVNNTVP
SALFKLGYNNAEVDAIVSYIDATGTIEGAPHVKPEHLAVFDCSFKASKGTRSIHYMGHIK
MMAATQPFLSGAISKTVNLPQDATVEDIAEAYIESWRQGLKAVAIYRDNSKGSQPLNVSA
SDGKAQKEKDAVSDKTVAATAETTAVLAAAEARLQAQQQQITALEQQIKAITEAASKNAD
SIDAQAPPRAVRHRLPAERASVTHKFGLSGHEGYITVGLYPNGQPGEIFIRMAKEGSTVS
GLMDSFATAISLALQHGVPLRVLCEKFAHTRFEPSGWTGNEQIGYAKSIMDYLFRWMQIR
FLSGQQLSLFAGLAPQASNPNAVPVEGTVQGPGSYVIPSLNASTSDAVILSGAKNPRISS
EAPGLLEDTYTTTPPKQGIAPDPTYTAESGNLTMEDRGIYHAADAMKSMYDMGDAPSCAT
CGAIMTRNGSCYRCMECGSTSGCS
NT seq 3315 nt   +upstreamnt  +downstreamnt
atggcaaccgcatccaaaaagaccaccacggctcccgcctctgaacaggtcgcagcacag
accgcagctgcctccgccaaacgcgcccccggcctcaccttctcgcgccacttcacgaag
cagggcgtctcgcccttcgacgaggtcacctgggagctgcgtgatgccgtcattcaggac
ttcaagggccgcactatcttcgagcagaaagacgtcgaggttcccaccgactggtcgatg
accgcgaccaacatcgtcgcgtccaagtatctccacggccagctcggaacccccgagcgc
gagaccggtgtccgcgccctgatcacccgcgtcgccgaatccatccgcgactggggcatg
gagagtggctatttcgcctccactgacgacgccgaggtcttcttcgccgagctgagccat
ctgctcatcaaccagaaggtcgccttcaactcgcccgtctggttcaacgtcggctgcgac
cggctcgagcccaactccgacgcgcagaactggcactggaacccgcacacctgcgccgtc
gagttctccgtcaccggctatcgcaagccccagtgctccgcctgcttcatcaactccgta
caggactcgctcgactccatcctcacccttgccaagaccgagggcatgctcttcaagtgg
ggatcgggaaccggctccaacctctcgaacatccgcgggtccatggagaccctctcgggt
ggcggcaccgccagcggcccgctctccttcatgcgcggcttcgacgccttcgccggcgtc
atcaagtccggcggcaagacccgccgcgcggccaagatggtcatcctcaacgtcgaccat
cccgacatcatcgacttcatcgagtgcaagcagaaggaagaggccaaggcccactcgctc
gtcgccgctggctacgatggctccggccccgactccgaggcctacagctccatcttcttc
cagaacgccaacaactccgtccgcgtcaacgacgagttcatggccgcggtcgaagctgac
tccaccttcgccacccgtaccgtcaaggcccgcaccccggtcaaggagtaccgcgcccgc
gacatcatgaacaagatcgccgaggccacctggctctgcggcgaccccggcatgcagtac
gacaccaccatcaatcgctggcacaccagcaagaacaccggccgcatcaacgcgtccaat
ccctgctccgagtacatgttcctcgacgactcggcctgcaaccttgcctccttcaatctc
ctgaagttcctcactccgggaggccagttcgacgtcgccgcctatcgccatgccatcgcc
atcgtcaccaccgcgatggagatcatcgtcgatgctgccggttaccccaccgagaacatc
gcgaagaactcgcacgactaccgccccctcggcctcggctacgccaacctcggcgctctc
ctgatggccttcggcctgccctacgactccgacgccggacgcgacttcgccgccaccgtc
accagcatcctctgcggcgacgcctactggcagtcctcccgcatcgcagaagcctgccct
ccgctcggagccgccaccccgctcacccagcaggctgaccgcaacaccgacgccaacttc
gacggctccaacggagcctgccccggcttctacatcaaccgcgagcccttcctcgacgtc
atccgcatgcaccgcgccgaggtcaacaacatcggcaagtcgaagtcctccgccgaaccc
ttcgtggccccgcagctcgacgagttgatcgccgccagcaaggactcctggaccggagcc
ctcgcccacggcgaaaagcacggctatcgcaactcgcaggtcaccgtcctcgcccccaca
gggaccatcggcttcatgatggactgcgacaccaccggcatcgagcccgacctcgccctc
gtcaagtacaagaagctcgtcggcggcggcatgatcaagatcgtcaacaacacggtcccc
tccgcgctcttcaagctcggctacaacaacgctgaggtcgacgccatcgtcagctacatc
gacgccaccggaaccatcgagggcgcgcctcacgtcaagcccgagcacctcgccgtcttc
gactgctccttcaaggcatccaagggaacccgctccatccactacatgggccacatcaag
atgatggccgccacccagcccttcctctcgggagccatctcgaagaccgtcaacctcccg
caggacgccaccgtcgaagacatcgccgaggcctacatcgaaagctggcgtcagggcctc
aaggccgtcgccatctaccgcgacaactccaagggctcccagccgctcaacgtctccgcc
tccgacggcaaagcccagaaggagaaggacgccgtctccgacaaaactgtcgccgccacg
gcagagaccactgcggttctggccgccgccgaagcccggctccaggcccagcagcagcag
atcaccgccctcgagcagcagatcaaggccatcaccgaggccgccagcaagaacgccgac
tccatcgacgcccaggcacccccccgcgccgtccgtcaccgcctgcccgccgagcgcgcc
agcgtaacccacaagttcggcctctccggacacgagggctacatcaccgtcgggctctac
cccaacggccagcccggcgagattttcatccgcatggccaaggaaggctccaccgtctcc
ggactcatggactccttcgccaccgccatctcgctcgccctccagcacggcgttcccctg
cgcgtcctctgcgagaagttcgcccacacccgcttcgagccctccggctggaccggcaac
gagcagatcggctacgccaagtccatcatggactacctcttccgctggatgcagatccgc
ttcctctccggccagcagctctccctcttcgccggactcgccccgcaggcgtccaacccg
aacgccgtccccgtcgaaggcaccgtccagggccccggcagctacgtcatcccctcactc
aacgcttcaacctctgacgccgtcattctgagcggagcgaagaatccccgtatctcgtcc
gaagcgcccgggctgctcgaggacacctacaccaccaccccacccaaacagggaatcgcc
cccgacccgacctacaccgccgagtccggaaacctcaccatggaagaccgcggaatctac
cacgccgccgacgccatgaagagcatgtacgacatgggcgacgccccaagctgcgccacc
tgcggagccatcatgacccgcaacggctcctgctaccgctgcatggaatgcggaagcacc
agcggctgcagctaa

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