Edwardsiella sp. EA181011: QY76_00835
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Entry
QY76_00835 CDS
T03991
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
edw
Edwardsiella sp. EA181011
Pathway
edw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QY76_00835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edw03019
]
QY76_00835
03009 Ribosome biogenesis [BR:
edw03009
]
QY76_00835
Messenger RNA biogenesis [BR:
edw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QY76_00835
Ribosome biogenesis [BR:
edw03009
]
Prokaryotic type
rRNA helicases
QY76_00835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
AAA_22
UTP25
Motif
Other DBs
NCBI-ProteinID:
AKM46064
LinkDB
All DBs
Position
complement(177375..179267)
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AA seq
630 aa
AA seq
DB search
MAEFETTFADLGLAAPIIEALNDLGYEKPSPIQAACIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLNNIDPSLKAPQVLVLAPTRELAVQVAEAMADFSKHMHGINVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLSLTSLRGLVLDEADEMLRMGFIEDVETIMAQIPAE
HQTALFSATMPEAIRRITRRFMNEPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYSSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVDNRERRLLRNI
ERTMKLTIPEVELPNAELLSTRRLAKFAARVQQQLESSDLDQYRALLAKLQPEDEQDMET
LAAALLKMAQGERPLILPPDPVVERRPRREFRERDERGGDRFARRERDERGGERPRRERR
EVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIRLFGSHSTIELPKGMPGDL
LTHFTRTRILNKPMNMQLIGDAPAREPRRERGGERRSFGGRDGGRDGDRRSFGGQRRFSD
DRRGDRGFNRDSRSTRSDDNGHSRRRFNDA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcgaaactacttttgctgacctggggttagccgcacctattattgaagcc
ctgaatgatttgggctatgagaagccgtcaccgattcaggcggcctgtattccccacctg
ctgaacgggcgcgacgtgctgggcatggcgcagaccggcagcggtaaaacggcggcgttt
tccctgccgctgctgaacaatatcgatccgtccctgaaagcaccgcaggtactggtgctg
gcgccgacccgcgagctggcggtacaggtggctgaagccatggcggatttctctaagcat
atgcacggtatcaacgtggttgccctgtacggcggccagcgttatgacgttcagctgcgc
gccctgcgtcaggggccgcagatcgtggtcggtacgccgggccgtctgctggatcatctg
aagcgcggtacgctgagcctgaccagcctgcgcggactggtgctggacgaagccgacgaa
atgctgcgtatgggctttattgaagacgttgagaccatcatggcgcagatcccggcggag
catcagactgcactgttttctgccaccatgccggaggcgatccgacgtatcacccgtcgc
tttatgaatgagccgcaggaagtgcgcatccagtctagcgtgacgacccgcccggacatc
agccagagctactggacggtgtatgggatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagactttgatgcggcgatcatcttcgtgcgcaccaagaacgccaccctggaa
gtggccgaagcgctggagcgtaacggctacagcagcgcggcgctgaacggcgacatgaac
caggcgctgcgtgagcagaccctggagcgcctgaaagacggtcgtctggatatcctgatc
gcgaccgatgtggccgcccgtgggctggacgtcgatcgcatcagcctggtcgtcaactac
gacatcccgatggatgccgagtcctatgtgcaccgtatcggccgtaccggccgcgccggt
cgcgccggccgtgcgctgctgttcgttgataaccgtgaacgccgtctgctgcgcaacatt
gagcgcaccatgaagctgaccattccagaagtggaactgccgaacgccgagctgcttagc
actcgccgtctggccaagtttgctgcccgtgttcagcagcagctggagagcagcgatctg
gatcagtaccgtgcgctgctggccaagctgcagccggaagatgagcaggatatggagacg
ctggccgccgcgctgctgaagatggcgcagggcgaacgtccgctgatcctgccgccggac
ccggtggttgaacgtcgtccgcgtcgtgaattccgcgagcgtgatgagcgcggtggcgat
cgcttcgcccgtcgcgagcgcgatgagcgcggcggtgagcgcccgcgtcgtgagcgccgc
gaagtcggtgatatggagctgtatcgcatcgaagtgggtcgtgacgatggcgtcgaagtt
cgtcatatcgtgggtgcaatcgctaacgaaggcgatatcagcagccgctatatcggcaac
attcgtctgttcggttcgcactccaccatcgagctgccgaaaggcatgccgggcgatctg
ctgacgcactttacccgtacccgtatcctgaacaagccgatgaatatgcagctgatcggt
gatgcgccggcgcgtgagccgcgtcgtgagcgcggtggtgagcgtcgcagcttcggcggt
cgcgacggtggtcgtgatggcgatcgccgcagctttggcggtcagcgtcgtttctctgac
gatcgccgcggcgatcgcgggttcaatcgcgatagtcgcagcacccgctcagacgacaat
ggccacagccgtcgtcgcttcaacgatgcgtaa
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