KEGG   Electrophorus electricus (electric eel): 113582520
Entry
113582520         CDS       T05787                                 
Symbol
col9a1
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
eee  Electrophorus electricus (electric eel)
Pathway
eee04510  Focal adhesion
eee04512  ECM-receptor interaction
eee04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:eee00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113582520 (col9a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113582520 (col9a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113582520 (col9a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:eee00535]
    113582520 (col9a1)
Proteoglycans [BR:eee00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   113582520 (col9a1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 113582520
NCBI-ProteinID: XP_026874115
LinkDB
Position
Unknown
AA seq 687 aa
MVYAGIFRPSLLVILVQTVLICSAQRGPVGPRGPSGPPGLPGFPGIDGIDGERGPGPGPD
GHAGPDGDDGKDGVLGRPGQPGADGLTGPRGEPGPDGPTGPKGEPGKAGPGGRPGVGEDG
EAGADGKDGLPGELGKVGAPGSRGPRGPVGLPGLAGPRGPPGVWKGEELCPNACTLGLSG
YSGLPGMKGHKGVKGEFGEPGRQGHKGEEGEQGGHGDPGVPGLPGPQGLRGITGIMGPKG
DRGSRGADGDSGTQGIAGAPGDRGQRGKVGETGPKGNQGLGGLTGIVGLRGPKGESGLPG
VDGREGIPGMPGVKGIPGKVGSPGDAGLQGLPGVPGISGAKGHSGPKGNSGDPGVAGPIG
NNGKTGERGEQGEVGPAGPRGGPGERGAKGPDGPLGLPGQRGPKGNLGLPGLPGPPGFPG
QQGDRGTVGLTGPKGAQGAPGEEGTPGEKGDHGDEGESGEKGSTGKPGDAGNRGPEGRRG
QQGTEGPAGQTGPRGMQGDRGVPGLPGPQGPSGRTPTDQHIKQVCMRVMQEQLAQLAASL
KRPEAGSAGLPGPPGPPGPPGPSGENGFPGHPGSRGLPGLKGPPGLLGSKGPKGDQGDRG
DKGPTAQGPKGIPGPPGLPGEPGHPAYGSDGHDGMQGPQGLPGMPGVPGPPGPPGLNGYC
EPSQCVLQALAAPQSAKEYNIKGPDGL
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggtgtacgcaggaattttccggccgtcgctattggtgattttagtgcaaacagtcctt
atctgctccgctcagaggggcccagttggtccgagggggccatctggccctccaggactt
cctggatttcctggcattgatggaattgatggggagaggggacccggccctggaccagac
ggccatgcaggcccagatggagatgatggaaaagacggagtgcttggaagaccaggacag
ccaggagcagatggtttgactgggcctcgtggagaacctggtccagatggacctactgga
ccgaaaggtgagcctggcaaggctggacctggggggagacctggggtcggagaggacggt
gaagctggtgccgatggaaaagacggactaccaggagaactgggcaaggttggagccccg
ggaagccgaggccccagaggaccagtgggccttccgggacttgctgggccgagaggtcct
cctggagtttggaagggtgaggaattgtgtccaaatgcgtgcacactcggactgtctggc
tatagtgggctaccaggtatgaagggacacaaaggtgtgaaaggtgaatttggtgaaccg
ggaagacaaggccataagggtgaagagggtgaacaaggaggccatggggaccctggagtg
ccaggactaccaggtccacagggtcttagagggatcactgggataatgggtcctaaaggt
gataggggctcacgtggagcagatggtgacagtggtactcagggaattgcaggtgcccct
ggtgatcgagggcaaagaggaaaagttggtgagactggaccaaaaggaaatcaagggctt
ggaggtctaacaggcatcgtaggtttacgtggacctaagggagaatcaggattgccagga
gtggatggccgtgaaggtatcccaggaatgccaggggttaagggtatccctggaaaagtg
gggtctcctggtgatgctggccttcaaggcctgcctggtgtgccaggcatctcaggggca
aagggtcatagtgggccaaagggtaactctggtgatccaggggtggcaggaccaattggg
aacaatggaaaaacaggtgaacgtggagagcagggggaggtgggaccagcaggacccaga
ggtgggccaggtgagagaggagcgaaaggtccagatggaccactaggattgccaggtcag
agggggcctaaggggaatctgggcctacctggtcttccaggtccacctggtttccctggt
cagcaaggtgacaggggcacagttggtcttactggtccaaaaggtgcacaaggagcaccc
ggtgaggagggtaccccaggagaaaaaggagatcatggtgatgagggagagtctggagag
aagggatcaacaggaaagccaggtgacgcagggaaccgagggccagagggtaggcgtggc
cagcagggcactgaaggcccggcaggacagacaggaccgcggggcatgcagggagaccgc
ggggtacccgggctacccgggccacaggggccatcgggccgcactccaacagatcaacac
atcaagcaggtctgcatgagggttatgcaagagcagctagctcaacttgcagccagcctg
aagaggccagaggctggcagtgccgggttgccaggtcctcctggtcctcccggtccccct
ggaccctcaggagagaatggcttcccagggcatcctggatccagagggttgccaggtctt
aaaggaccccctggactgctggggagtaaaggacctaaaggtgaccaaggagacagagga
gacaaaggacctacagcacaagggccgaaaggcatacctggacctcctggacttccaggt
gagcctgggcacccggcatatggtagcgacgggcatgacggaatgcaagggcctcagggg
ttgccaggaatgcccggcgttccaggacctcctgggcctcctggccttaacggatactgc
gagccatcgcaatgtgttctccaggctctggcggcaccacagtctgccaaagagtacaac
atcaagggaccggatggcctttga

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