Electrophorus electricus (electric eel): 113582520
Help
Entry
113582520 CDS
T05787
Symbol
col9a1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee04510
Focal adhesion
eee04512
ECM-receptor interaction
eee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113582520 (col9a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113582520 (col9a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113582520 (col9a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
eee00535
]
113582520 (col9a1)
Proteoglycans [BR:
eee00535
]
Extracellular matrix (ECM) proteoglycans
Others
113582520 (col9a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113582520
NCBI-ProteinID:
XP_026874115
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MVYAGIFRPSLLVILVQTVLICSAQRGPVGPRGPSGPPGLPGFPGIDGIDGERGPGPGPD
GHAGPDGDDGKDGVLGRPGQPGADGLTGPRGEPGPDGPTGPKGEPGKAGPGGRPGVGEDG
EAGADGKDGLPGELGKVGAPGSRGPRGPVGLPGLAGPRGPPGVWKGEELCPNACTLGLSG
YSGLPGMKGHKGVKGEFGEPGRQGHKGEEGEQGGHGDPGVPGLPGPQGLRGITGIMGPKG
DRGSRGADGDSGTQGIAGAPGDRGQRGKVGETGPKGNQGLGGLTGIVGLRGPKGESGLPG
VDGREGIPGMPGVKGIPGKVGSPGDAGLQGLPGVPGISGAKGHSGPKGNSGDPGVAGPIG
NNGKTGERGEQGEVGPAGPRGGPGERGAKGPDGPLGLPGQRGPKGNLGLPGLPGPPGFPG
QQGDRGTVGLTGPKGAQGAPGEEGTPGEKGDHGDEGESGEKGSTGKPGDAGNRGPEGRRG
QQGTEGPAGQTGPRGMQGDRGVPGLPGPQGPSGRTPTDQHIKQVCMRVMQEQLAQLAASL
KRPEAGSAGLPGPPGPPGPPGPSGENGFPGHPGSRGLPGLKGPPGLLGSKGPKGDQGDRG
DKGPTAQGPKGIPGPPGLPGEPGHPAYGSDGHDGMQGPQGLPGMPGVPGPPGPPGLNGYC
EPSQCVLQALAAPQSAKEYNIKGPDGL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggtgtacgcaggaattttccggccgtcgctattggtgattttagtgcaaacagtcctt
atctgctccgctcagaggggcccagttggtccgagggggccatctggccctccaggactt
cctggatttcctggcattgatggaattgatggggagaggggacccggccctggaccagac
ggccatgcaggcccagatggagatgatggaaaagacggagtgcttggaagaccaggacag
ccaggagcagatggtttgactgggcctcgtggagaacctggtccagatggacctactgga
ccgaaaggtgagcctggcaaggctggacctggggggagacctggggtcggagaggacggt
gaagctggtgccgatggaaaagacggactaccaggagaactgggcaaggttggagccccg
ggaagccgaggccccagaggaccagtgggccttccgggacttgctgggccgagaggtcct
cctggagtttggaagggtgaggaattgtgtccaaatgcgtgcacactcggactgtctggc
tatagtgggctaccaggtatgaagggacacaaaggtgtgaaaggtgaatttggtgaaccg
ggaagacaaggccataagggtgaagagggtgaacaaggaggccatggggaccctggagtg
ccaggactaccaggtccacagggtcttagagggatcactgggataatgggtcctaaaggt
gataggggctcacgtggagcagatggtgacagtggtactcagggaattgcaggtgcccct
ggtgatcgagggcaaagaggaaaagttggtgagactggaccaaaaggaaatcaagggctt
ggaggtctaacaggcatcgtaggtttacgtggacctaagggagaatcaggattgccagga
gtggatggccgtgaaggtatcccaggaatgccaggggttaagggtatccctggaaaagtg
gggtctcctggtgatgctggccttcaaggcctgcctggtgtgccaggcatctcaggggca
aagggtcatagtgggccaaagggtaactctggtgatccaggggtggcaggaccaattggg
aacaatggaaaaacaggtgaacgtggagagcagggggaggtgggaccagcaggacccaga
ggtgggccaggtgagagaggagcgaaaggtccagatggaccactaggattgccaggtcag
agggggcctaaggggaatctgggcctacctggtcttccaggtccacctggtttccctggt
cagcaaggtgacaggggcacagttggtcttactggtccaaaaggtgcacaaggagcaccc
ggtgaggagggtaccccaggagaaaaaggagatcatggtgatgagggagagtctggagag
aagggatcaacaggaaagccaggtgacgcagggaaccgagggccagagggtaggcgtggc
cagcagggcactgaaggcccggcaggacagacaggaccgcggggcatgcagggagaccgc
ggggtacccgggctacccgggccacaggggccatcgggccgcactccaacagatcaacac
atcaagcaggtctgcatgagggttatgcaagagcagctagctcaacttgcagccagcctg
aagaggccagaggctggcagtgccgggttgccaggtcctcctggtcctcccggtccccct
ggaccctcaggagagaatggcttcccagggcatcctggatccagagggttgccaggtctt
aaaggaccccctggactgctggggagtaaaggacctaaaggtgaccaaggagacagagga
gacaaaggacctacagcacaagggccgaaaggcatacctggacctcctggacttccaggt
gagcctgggcacccggcatatggtagcgacgggcatgacggaatgcaagggcctcagggg
ttgccaggaatgcccggcgttccaggacctcctgggcctcctggccttaacggatactgc
gagccatcgcaatgtgttctccaggctctggcggcaccacagtctgccaaagagtacaac
atcaagggaccggatggcctttga
DBGET
integrated database retrieval system