Electrophorus electricus (electric eel): 113583343
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Entry
113583343 CDS
T05787
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113583343 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113583343 (cnot1)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113583343 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113583343 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Med13_C
Motif
Other DBs
NCBI-GeneID:
113583343
NCBI-ProteinID:
XP_026875431
LinkDB
All DBs
Position
Unknown
AA seq
2381 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLITKPNFISTLCYAIDNPLHYQKSLKPSQHLFPQLSKVLK
LSKVQEVIFGLALLNSSNTDLRGFAAQFVKQKLPDLLRSYVDADLGGSQEGGFQDIAIEA
LHLLLSHLLFGQKGSSGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCASVDECRNIILQYGVREVTACQVARVLGMMART
HSGLSDGIPLQSISTPGSGIWSDGKDKSDSSQPHSWNVEVLIDVVKELNPNLNFKEVTYE
LDHPGFMIRDSKGLHVVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQQSLMSPDVFC
FADFPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPTIMGGLAPEKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVDPLTAMGSLNL
GSSATTHTQNMQGFPTPLGSAFSNPQSPAKAFPPLTNPNPSTAFSGISGLSSQLPGASEY
CALGSGSLSGIGSSLGMPAVTSDPFGPRKMSTPGLNPPTFQHCRLKPSDLSQVWPEANQH
FSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEY
RFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAALD
RFKNRLKDYPQYCQHLASIGHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLA
LAQAQAQSQPTKAPQPGQASTLVTTTTTTTTVAKTTTISRPTAVGFKKDVPPSINTTNID
TLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMSQKVEELKETVKEEFMPWVSQYLVM
KRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLG
HWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSVVFRPQN
PWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKEKLKNLEEQL
SAPKKETKQPEENPIVPTAAAPSAPAATATTATTGPPTPQFSYHDINVYSLAGLATHINI
NNNLALLQTHPQLKPCVRQAIDRAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESH
MRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTSQQRDMMEEAAARIA
QDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPMVLTYQAERMPEQ
IRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGILAQPMKHQAWPTDDMAHIYDKC
ISDLEQHLHAIPPALAMNPQAQALRSLLEAVAMARNSRDGITALGLLQKAVEGLLDATSG
ADADLLLSYRECHLLVLKALQDSRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRNH
LVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHITEADLFHTIETLMRTC
AHSRANAPEGLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREKAEYL
LREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQA
EQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLI
QDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFV
YAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILYKGT
LRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDML
SEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNIQLI
NALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLR
YPNSHTHYFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAF
KFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctacctggtggacaattta
actaagaaaaactacagagccagccagcaagaaatacagcacattgtgaatcgtcacggc
cctgaggcagacaggcatctattacgctgtctcttttcgcatgtcgatttcagtggcgat
ggtaaaagcagtggtaaagatttccaccagacacagtttctgatccaggagtgtgtatct
cttatcacgaagccaaattttatttcaacactctgctacgccattgacaatcctctgcat
taccagaagagtttgaagccatcgcaacatttgttccctcaactgagtaaagttcttaaa
ctaagcaaggttcaagaggtgatttttggccttgctcttctgaactccagtaatacagac
cttcgagggtttgctgctcagtttgtaaaacagaaactcccagatctcctgcgctcatac
gtggacgctgacctcggggggagccaggaaggtggcttccaggacattgccatagaggct
ctgcacctgctgctctctcacctgctgtttgggcagaagggctccagcggagtcggccaa
gagcagattgacgccttcctcaaaacactgtgcagagatttcccgcaggagcgctgtcct
gtggtgctcgcaccacttctgtaccctgagaaacgggacattctcatggacaggatcctg
ccagactctggagagttagcgaagaccatgatggagagttcccttgcggagtttatgcaa
gaagttggctatggtttttgtgcaagtgttgatgagtgtaggaacataatcctgcagtat
ggggtgcgtgaggtgactgcctgccaggtggccagagtgctgggcatgatggcccgcact
cactctggcctttctgatggaatcccactacagtccatctccaccccgggcagtggtatc
tggagtgacgggaaggacaaaagtgacagctctcaaccccacagctggaacgtggaagtt
cttattgacgttgttaaggagctcaatcccaatctgaatttcaaagaggtgacgtatgag
cttgaccacccaggcttcatgatacgggacagcaaggggctgcatgtagtggtgtatggg
attcagaggggactgggtatggaggtcttccctgtggacctcatctacaggccatggaag
cacgctgaagggcagctctccttcatccagcagtccttgatgagccctgacgtgttctgc
tttgccgatttcccttgtcacacagtcgccatcgacatcctcaaagctccacctgaggat
gacaacagggagatagccacatggaaaagcctggacctggtggagagcctgctgcgcctg
tccgaggtgggccagtacgagcaggtgaaacagctcttcagcttccccatcaagcactgc
ccagacatgctggtgctggcgctgctgcagatcagcacgtcgtggcacacgctgcgacac
gagctcatctccaccctcatgcccatcttcctgggcaaccaccccaactcggccatcatc
ctgcattatgcctggcatgggcagggccagtctccctccattcgccagctcatcatgcac
tcgatggcggagtggtacatgaggggggagcagtatgaccaggccaagctctcgcgcatc
ctggatgtggctcaggacttgaagtctctatcgatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgccgcgaatacctcaaactagacaaatgg
ctgactgataaaatcagagagcatggggagcccttcatccaggcgtgtgtgaccttcctg
aagagacgctgccctaccatcatgggtggactggccccagagaaagaccagcccaaaagt
gcccagctgcctcctgaaaccctggctactatgctggcctgcctgcagtcctgcgcaggg
agtgtgtctcaagaactgtcagagactatcttgaccatggtggccaactgtagcaacgtg
atgaacaaggctcgccagcctccaccaggcgtcatgcccaagggccgggctcccagcacc
agcagcctggatgccatctccccggtggatcccctcactgcaatgggctctctgaatctg
ggcagctcagctaccacccacacacagaacatgcaaggcttcccgacaccgctgggatcc
gctttcagcaacccccagtcccctgctaaggccttcccccctctcaccaaccctaacccc
agcacagccttcagcggaatcagtggcctctcctcccagctcccaggtgcttctgaatac
tgtgcgttgggttcaggcagcttgagtggcattggttcaagtctgggcatgccagcagtg
accagcgacccgtttggcccgaggaagatgagcacaccagggttgaacccacccaccttc
cagcattgtaggttgaagccctctgacctctctcaggtatggccagaggccaaccagcac
tttagtaaggagatcgacgacgaggccaacagctactttcagaggatctacaaccatcca
cctcaccccaccatgtctgtggatgaggtgctggagatgctgcagaggtttaaggactcc
aacatcaagcgggagcgagaggtgtttaactgcatgctgcgcaacctgtttgaggagtac
cgcttcttcccccagtacccagacaaggagctgcacatcaccgcctgtctgtttggcggg
atcatcgagaagggcctggtcacctacatggctcttggcctcgctctgcgatatgttctg
gaggccttgcgcaagccctatggatccaaaatgtattattttggaattgctgcactagat
cggtttaaaaaccgactgaaggactatccacagtattgtcagcatttggcatccataggc
cattttctgcagttccctcaccatttgcaagagtgtgtacagtatatcgagtatgggcag
cagtcccgtgaccctccggtgaagatgcagggctccatcaccacgccgggcagtttggct
ctggcccaagcccaggcccagtctcaacctaccaaagcacctcagcccggccaggccagc
accctggtgactaccaccactaccaccaccaccgtagccaaaactaccaccatctccagg
cccactgcagtaggttttaagaaggatgtgccaccttcaatcaacaccacaaacatcgac
acactgctggtagcgacagaccaaactgaaaggattgtggagcccccagagaatgtgcag
gagaagatagctttcattttcaacaacctttcgcagtcgaacatgtctcaaaaggttgaa
gagctaaaggagactgtgaaggaggagtttatgccatgggtgtcgcagtacttggtgatg
aaacgtgttagcattgagccgaacttccacagtctctactccaacttcctcgacacactg
aaaaacccagagtttgtcaaaatggttttgaacgagacatacaggaacattaaggtcctc
ctgacctctgacaaagcagctgctaatttctctgatcgatccctgctgaagaacttgggc
cactggcttggcatgatcactctagctaagaacaagcccatcctctatactgatttggag
gtgaagtctctgcttctagaggcttatgtgaaagggcagcaggagctgctctatgtggtc
cccttcgtggccaaagtgttggagtcgagcctgcgtagcgtggtgttcaggccacagaac
ccctggaccatggccatcatgaatgtactggctgagctacaccaggagcatgatctaaag
ctcaacttgaagttcgagattgaggtgctgtgtaagaacctgtctctggacatcaatgac
ctgaagccaggaaacctgttgaaggacaaggagaaactcaagaatctagaggagcagctg
tctgcaccaaagaaagagaccaagcaaccggaggagaatcctatagtccctacagcagct
gccccatctgctcctgctgccacggcaaccactgcaacaacaggccctcccaccccacag
ttcagctaccacgacatcaacgtgtattcgctggcaggcttggccacgcacatcaacatc
aacaacaatttggccctgcttcagacccacccccagctgaagccgtgtgtgcgacaggcc
atcgaccgtgcagtgcaggagctcgtccaccccgtggttgaccgctccatcaagatagcc
atgacgacatgtgagcagattgtccggaaggactttgccctggactcagaggagtcgcac
atgcgtgtcgctgcccaccacatgatgcgcaacctgacagccggcatggccatgatcacc
tgcagagagccgctgctgatgagcatcgccaccaacctgaagaacagctttgcagctgcg
ctcagggctcccacgtcccagcagagggacatgatggaggaggcagccgcccgcatcgct
caggataactgtgaactagcttgctgcttcattcagaagacagccgtggagaaagctgga
cctgagatggacaagagactggccactgagtttgagctgaggaagcatgctcgtcaggag
ggccggcgctactgcgaccctatggtgctcacctaccaggctgagcgcatgccagagcag
atccgcctcaaggtgggtggtgtggaccctaagcagctggctgtttatgaggaatttgcc
cgaaatgttccggggttcctgcccagcaatgatctgtctcaacccactggcatcctggct
cagcctatgaagcatcaggcgtggcccactgacgacatggcccacatctacgataagtgc
atctctgacctggagcagcacctgcatgccatcccgccggcgctggccatgaacccacag
gcccaggccctgcgcagcctgctcgaggcggtggccatggcccgcaactcccgagacggc
atcactgccctgggcctactgcagaaggctgttgagggtctgttggatgccacaagtgga
gcagatgctgatttgctgctgagctacagagagtgccacctgctggtgctgaaggcactg
caggacagtcgtgcctacggaccgcagtggtgcaacaaacagatcacaaggtgcctgatc
gaatgtcgagatgagtacaagtacaatgtggaggcagtggagctcctgatcagaaaccac
ctggtcaacatgcagcagtatgacctgcacctagcccagtccatggagaatgggctccac
tacatggccgtggccttcgccatgcagctggtgaagctcctgctggttgatgagcgcagc
gtcagtcacatcactgaggccgacctcttccacaccatcgagaccctcatgagaacctgc
gcacactccagagccaatgcacctgaagggctaccccagctcatggacgtggtccgctcc
aactatgaggccatgatcgaccggcaccatggcgggcccaacttcatgatgcactctggg
atctcgcaggcgtccgagtacgacgacccgccaggcctgcgcgagaaagcggagtatctg
ctgagagagtgggtcaacctgtaccactctgctgctgctggcagagacagcaccaaagct
ttctctgcatttgtgggtcagatgcaccagcagggcatcctgaagacagatgacctcatc
acgcgtttcttccgcttgtgcacggagatgtgcgtggagatcagctaccgagctcaggcc
gaacagcagcataacccggccgccagcgctgccatcatacgcgccaagtgctaccacaac
ctggacgcctttgtgcgcctcattgccctgctcgtcaagcactctggggaggccaccaac
acggtcaccaagatcaacctgctcaacaaggtgttgggcatcgtggtgggcgtgctgatc
caggaccatgacgtgcggcagacagagttccagcagttgccctatcaccgcatcttcatc
atgctcctcctggagctcaatgcccctgagcatgtgctggagaccatcaacttccagacc
ctcactgccttctgcaacaccttccacatcctgaggccgaccaaagccccaggcttcgtc
tatgcttggctagagctcatctcccatcgaatcttcatagccaggatgttggcgcacacc
ccgcagcagaagggttggcccatgtacgcccagctgctcatcgatctgttcaagtaccta
gcgcccttcctgaggaacgtcgagcttaacaaacctatgcaaattctctataagggcacc
ctgcgcgtcctccttgtcctgctgcatgatttcccagagtttctgtgtgactatcactat
ggcttctgcgacgtgatcccacccaactgcatccagctgaggaacctcatcctgagtgcc
ttcccccgcaacatgaggcttccagatccttttactccaaatctcaaggtggacatgctg
agtgagatcaacatcgcaccccgcatccttaccaacttcactggcgtgatgccctcacag
ttcaagaaggatcttgactcatatctaaagacccgttctcctgtcaccttcctttctgag
ctccgcagcaacttgcaggtgtccaatgaaccaggcaaccgctacaacatccagctgatc
aatgccctggtgctgtatgtgggaacacaggccattgcccacatccacaacaagggtagc
acaccttccatgagcaccatcactcactcagcacacatggacatcttccagaaccttgct
gtggacctggacactgaagggcgctatctgttcctgaatgcaatagctaatcagctgcgt
tacccgaacagccacacccactacttcagctgcaccatgctctacctgtttgctgaagcc
aatgccgaggccattcaagagcagatcaccagggtgctgctggagaggctgattgtcaac
aggccacacccctgggggctcctcatcaccttcattgagctgatcaagaatccggccttc
aagttttggagccacgactttgtgcactgtgccccagagatagagaagctgttccagtca
gtggctcagtgctgtatggggcagaagcaggctcagcaggtgatggagggcacaggtgcc
agctag
DBGET
integrated database retrieval system
