Electrophorus electricus (electric eel): 113586884
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Entry
113586884 CDS
T05787
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee04510
Focal adhesion
eee04512
ECM-receptor interaction
eee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113586884 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113586884 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113586884 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
eee00535
]
113586884 (col9a3)
Proteoglycans [BR:
eee00535
]
Extracellular matrix (ECM) proteoglycans
Others
113586884 (col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113586884
NCBI-ProteinID:
XP_026881079
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MALFSALGLLLLCQLLTSSAAQRPGPRGSLGLPGPPGPPGKDGTDGKLGPAGLPGKPGPK
GKAGAPGSAGAAGLPGLPGVDGLPGPDGPAGKDGRPGPLGDPGPTGPAGPPGRGRSGAPG
LSGANGLPGGAGPQGPPGPEGLPGLPGLPGPDGPPGLPGALPEGNGDLLCPAICPPGPPG
PPGMPGFKGHTGHKGDKGEPGKDGEKGDPGPPGPPGIPGTVGLQGPRGLRGLTGPAGGVG
DRGLPGFRGKPGPSGVIGKTGDAGEKGPHGFTGPKGEIGKTGPKGLPGAVGPKGEPGIPG
RDGKDGTQGLDGEKGDAGRPGVPGEKGPDGLPGLQGKAGAKGAKGGVGDPGEMGEAGPSG
EPGIPGEIGIPGERGEAGPRGITGAIGLVGNPGPQGVKGFQGLKGALGDPGLPGPTGLRG
LFGERGPVGATGPKGDMGMAGSDGLPGENGETGPFGPTGQKGEAGKRGELGPKGVSGPQG
ETGARGPPGKSGLMGFQGEQGLPGVPGKTGVPGKLASEQHIRELCGSMIDDQIAQLAANL
RRPLAPGAVGRPGPAGPPGKPGESGSIGHPGVRGPPGYRGLPGDLGDPGTRGDVGEPGDK
GDIGRAVDGPVGDQGEPGLQGVAGIVKDGRDGAPGDPGAPGEPGRPGRPGHQGPPGICDT
SACQGTMAHGKSTNPKN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctctgttctcggctcttgggctgctcttgctttgccagcttttgacgtcctccgct
gcgcagagacctggtcctcgtgggtcactgggacttcccggacctcctggacccccaggg
aaggatggcaccgatggaaagctaggtcctgctggacttcctggaaagcctggacccaaa
ggcaaggctggagccccgggttcagcaggggccgccggactacccggcctgcccggagtg
gatggtttgccgggtcctgacggaccggccggtaaggacggacgtccagggcctctgggt
gatcctggacccaccggacctgctggacctcctggcagagggagatcaggagctcctggg
ctgtccggagccaatggattgccaggtggagcaggtccccagggccccccaggaccagag
ggtcttccagggcttccgggtcttccaggtccagatggaccacctggacttcctggagca
ctgcctgagggaaacggggacctgttgtgccctgccatctgtccgccagggcctccgggg
ccacctgggatgccaggattcaaggggcacacaggacacaagggagataagggtgaacct
gggaaggacggtgaaaagggagatccagggcctcctggtccccctggaatcccaggaaca
gtgggtctacagggccctcgtggtttgagaggactgacaggaccagcaggaggtgttgga
gacagaggcttgccagggttcagaggcaaacctgggccttctggcgtcatagggaaaaca
ggcgacgctggagagaaaggacctcacggattcacaggacctaaaggagagataggcaaa
actggccctaaaggcttgccaggagctgtgggccccaaaggcgaacctgggatcccgggt
agagatggcaaagatggcactcaaggactagatggtgaaaagggcgacgctggtcggccg
ggggtccctggagagaaaggacccgacggtttaccgggtttgcaaggaaaagctggtgca
aagggagctaaaggaggagttggggatccaggagagatgggggaggcaggaccatctgga
gagccaggtattcctggtgagattgggattccgggggagagaggtgaagctggacccagg
ggcatcactggagccatcggactggttggaaatcccggacctcagggtgtcaaaggattc
caggggcttaaaggagcgctcggggaccccggacttcctggcccaactggactccgggga
ctgttcggagagaggggtcctgtaggagctacaggacctaaaggagacatgggtatggct
ggaagtgatggcttgccaggagagaatggagaaacgggcccgtttggtcctactggacaa
aaaggagaggcagggaagcgtggtgagctgggacccaaaggagtctcaggaccacagggt
gagactggtgctagaggaccacctgggaaatcagggctgatgggattccaaggagaacag
ggtctaccaggcgttcctggaaagactggcgttcctggaaaactggcaagtgaacagcat
ataagagaactgtgtggatcaatgattgatgaccagattgcacagttggctgctaacctc
aggaggcccctggcacctggtgcagtgggcagaccaggaccggctggtcctcctggaaag
ccgggagagtctgggtccatcggacatcctggagttcgtggtccgccgggatacagaggg
cttcctggagatctgggtgatccaggcaccagaggtgatgtcggtgaaccaggtgataaa
ggagacatcgggagggccgttgatggtccagtgggagaccaaggggaaccaggtctccaa
ggagtagcggggatcgttaaagatgggcgtgatggcgctcctggggatccaggagcgccc
ggagaaccaggcaggccaggcaggccagggcaccaaggaccccctggaatctgcgacaca
tcagcctgccagggcacaatggctcacgggaagtcaaccaaccccaagaattaa
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