Eikenella exigua: EZJ17_09175
Help
Entry
EZJ17_09175 CDS
T06211
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
eex
Eikenella exigua
Pathway
eex02020
Two-component system
eex02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EZJ17_09175 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EZJ17_09175 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eex03021
]
EZJ17_09175 (rpoN)
Transcription machinery [BR:
eex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EZJ17_09175 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_Crp_2
HTH_17
HTH_IclR
HTH_24
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QED92754
LinkDB
All DBs
Position
complement(1808342..1809712)
Genome browser
AA seq
456 aa
AA seq
DB search
MTQQSVKLKLRQTQQLNQKQQQSLRILHMSSLELAEEVESWLADNPLLERPEHDPAYSGE
PEPHYSAAIPVTRKTNSMEESDVWETVADEADFSRMLHEQVCEHPLDENQAARVHLLIDY
LDDQGYLNDSLTDIVENSPLEWMLDEDDMAEALRHLQQFDPAGVGARDLGESLLLQLARQ
QPDDTVFCAVQLVKHFLPDIVKSSLPPQVRKKFPQYSAATIEAAQALVASLNPFPAYGLS
GSGHTEYVDPDVWIRPDPETGKWTVGMYRQAWPQVQLNQEYSDLLAEYGSEAPELKQKLN
EAKVLLSSLEQRKSTVLRLAETILERQADFFSFGAIGLVPLTIKETAANLGLAESTVSRA
VNQKYLACPQGVFPLRYFFSQAAAYSSEEDSDGISANAVKALIESLIAAEDKRKPLSDQA
MSERLALQGIILARRTVAKYREELNFPPAHQRKQKA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaatccgtcaaactcaaactgcgccaaacccagcagctcaatcagaagcag
cagcaatcattgcgcattttgcatatgtcgtcgctggaattagccgaagaagtggaaagc
tggctggccgacaaccccctgctcgaacgaccagaacacgacccggcctacagcggcgag
cccgaaccccattattccgccgccataccggttacccgcaaaaccaacagcatggaagag
agcgacgtgtgggaaaccgtggccgacgaagccgatttctcccgcatgctgcacgagcag
gtgtgcgaacacccgctagacgaaaaccaagcggcccgcgtgcatttgctgatcgattat
ctcgatgaccaaggctacctgaatgacagcctcaccgacatcgtggaaaactctccgctg
gaatggatgctcgatgaggacgacatggccgaagccctgcgccatctgcagcagttcgat
cccgccggcgtgggtgcgcgcgatttgggcgaatcattattgctccagctggcgcggcag
cagccggacgacactgtattctgcgccgtgcagctggtgaaacacttcctgcccgacatc
gtcaaaagcagcctgccgccgcaagtgcgcaaaaaattcccccaatacagcgccgccacc
atcgaagccgcccaagccctcgtcgcctccctcaaccccttccccgcctacggcctttcc
ggttccggccacaccgaatacgtcgatcccgacgtatggatccgccccgatcccgaaacc
ggcaaatggacggtgggcatgtaccgccaggcctggccgcaggtgcagctcaatcaggaa
tattccgacctgctcgccgaatatggcagtgaagcgccggagttgaaacaaaagctcaat
gaggctaaagtattgctaagctcgctggagcagcgcaaaagcactgtgttgcggctggcc
gaaaccattttggagcgtcaggccgacttcttctctttcggcgccatcggtctcgtgcca
ctcaccattaaagaaaccgccgccaacctcggcctggccgaaagcactgtgtcccgcgcc
gtaaaccaaaaatatttggcttgcccgcaaggcgtatttccgctacgctattttttcagc
caggcagccgcctacagcagcgaagaagacagcgacggcatcagcgccaacgcagtaaaa
gcccttatcgaaagcctgattgccgccgaagacaaacgcaagccgctctccgaccaagcc
atgtccgagaggctcgctctgcaaggtatcatactcgccaggcgcactgtggccaaatat
cgcgaagaactcaatttcccgcctgcgcaccaacgcaagcagaaagcctag
DBGET
integrated database retrieval system
