Enterococcus faecium Aus0085: EFAU085_02890
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Entry
EFAU085_02890 CDS
T02788
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
efau
Enterococcus faecium Aus0085
Pathway
efau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
efau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EFAU085_02890 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efau03021
]
EFAU085_02890 (rpoB)
03400 DNA repair and recombination proteins [BR:
efau03400
]
EFAU085_02890 (rpoB)
Enzymes [BR:
efau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EFAU085_02890 (rpoB)
Transcription machinery [BR:
efau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EFAU085_02890 (rpoB)
DNA repair and recombination proteins [BR:
efau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EFAU085_02890 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AGS76842
LinkDB
All DBs
Position
complement(2943537..2947154)
Genome browser
AA seq
1205 aa
AA seq
DB search
MAGHVVKYGKHRERRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIDDFNG
NLSLEFVDYELKEPKYTVAEARAHDANYSAPLHVTLRLTNRETGEIKAQEVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAKDIS
YVRIDRTRKIPLTVLVRALGFGSDDTIFEIFGDSETLRNTVEKDLHKNASDSRTEEGLKD
VYERLRPGEPKTADSSRNLLNARFFDPKRYDLANVGRYKVNKKLDLKTRLLNLTLAETLV
DPETGEIIVEKGTVLTHQVMETLAPFIDNGLNSVTYYPSEDGVVTDPMTVQVIKVFSPRD
PEREVNVIGNGYPEAAVKTVRPADIIASMSYFLNLMEGIGNVDDIDHLGNRRIRSVGELL
QNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQTNP
LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAK
VNKFGFIETPYRRVDRETGRVTDQIDYLTADIEDHYIVAQANSPLNEDGTFAQDVVMARA
QSENLEVSIDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINPQAP
WVGTGMEYKSAHDSGAALLCKHDGVVEYVDASEIRVRRDNGALDKYDVTKFRRSNSGTSY
NQRPIVHLGEKVEKGDTLADGPSMEQGEMALGQNVLVGFMTWEGYNYEDAIIMSRRLVKD
DVYTSIHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVQDGDLLVG
KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDELSPG
VNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPIDIMLNPLGVPS
RMNIGQVLELHLGMAARQLGIHVATPVFDGASDEDVWETVREAGMASDAKTVLYDGRTGE
PFDGRVSVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDMRV
LDIEETEIELRDMDDEDDDLITVDALTKFAEQQTAKELEKKAAEQVEDEKDDVIQNFETA
EDNLD
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttggctggacacgtagtaaaatacggaaaacatcgcgaacgtagaagtttcgcaagaatc
agtgaagtgttggaattaccaaatttgatcgaaattcaaacagactcttaccaatggttc
ttagatgagggacttagagaaatgtttgaagacattttgccaatcgatgacttcaatggc
aatctatctttggaatttgtagattatgaattgaaagaaccaaagtatacagtagcagaa
gctcgtgcgcatgatgcaaactactctgcaccattacatgtaacattgcgtttgacaaac
cgcgagactggcgaaatcaaagcacaagaagtattcttcggtgatttcccattaatgaca
gaacaaggaacattcatcatcaacggggcagagcgagtaatcgtttctcagttagtccgt
tcaccaggtgtctatttccatggaaaagtcgacaaaaacggaaaagaaggattcggttct
actgttatccctaaccgtggagcttggctagaaatggaaactgatgcaaaagacatctct
tatgtacgtatcgaccgtacacgtaagattcctttaaccgtattagttcgtgcgttagga
tttggttccgatgatacgatctttgaaatcttcggcgacagcgaaacattacgcaataca
gtcgaaaaagacttgcataaaaacgcaagcgactcaagaacagaagaaggtttgaaagac
gtttacgaacgtttgcgtccaggcgaaccaaaaacagcagacagctcacgtaacttgctg
aatgctcgtttcttcgatccaaaacgttacgacttagcaaacgttggtcgttacaaagta
aacaaaaaattagatttgaaaacacgtctattgaatctgacattagctgaaacattagtt
gatccagaaacaggcgagatcatcgttgaaaaaggaacagttctgactcaccaagtcatg
gaaacactagctcctttcattgataatggcctaaattcagtgacttactatccatcagaa
gacggtgtggtcacagatccaatgactgtccaagtcatcaaagtattttcaccaagagac
cctgaacgtgaagtaaacgtgatcggaaacggctatccagaagcagctgtaaaaacggtt
cgtccagccgacatcattgcttcaatgagctatttcttgaacttgatggaaggtatcggc
aatgtcgatgatatcgaccacttaggaaatcgtcgtatccgttcagtcggtgaactttta
caaaaccaattccgtatcgggctagcacgtatggaacgtgtggttcgtgaaagaatgtcg
atccaagatactgaaacattgacacctcaacaattgatcaatatccgtccagttgtggca
agtatcaaagaattctttggttcttctcagttgtcacagttcatggatcaaacaaaccct
cttggcgaattgacacacaaacgtcgtctttcagccttaggacctggcggattgactcgt
gaccgcgccggttatgaagttcgtgacgttcactactcccactatggccgtatgtgtccg
atcgaaactcctgaaggcccaaacatcgggttgatcaatagtttgtccagttatgcgaaa
gtaaataaattcggatttatcgaaacaccttatcgtcgtgtagaccgtgaaacaggtcgt
gttactgaccaaatcgactacttgacagctgatatcgaagaccattacatcgtagcccaa
gcaaacagcccattgaatgaagatggaacatttgctcaagacgttgttatggctcgtgct
caaagtgaaaacttagaagtatctattgataaagtagactacatggacgtatcacctaaa
caagtagttgccgttgcgacagcatgtattcctttcttggaaaacgatgactccaaccgt
gccttgatgggtgccaacatgcagcgtcaagcagtgccgttgatcaatcctcaagcacca
tgggttggtactggtatggaatacaaatcagcgcatgactcaggagctgctttgttatgt
aaacatgacggtgtcgttgaatacgttgatgcttctgaaatccgcgtacgccgcgacaac
ggtgcattagataaatacgatgtaacaaaattccgtcgttcaaactccggaacaagctac
aaccaacgtccaatcgttcatttgggtgagaaagtcgaaaaaggggatactctggcagac
ggaccatctatggaacaaggcgaaatggctctaggccaaaacgttttagttggtttcatg
acttgggaagggtacaactatgaagatgcgatcatcatgagccgtcgtttggtaaaagat
gacgtatacacttctatccatattgaagaatatgaatcagaagcccgcgatacaaaatta
ggacctgaagaaatcacacgcgaaatccctaatgtcggggaagacgcattaaaagattta
gacgaaatgggtatcatccgtattggtgcagaagtccaagatggcgatttgcttgtaggg
aaagtcacgccaaaaggggtaacagaattatctgcagaagaacgtctattgcatgcgatc
tttggcgaaaaagctcgtgaagtccgcgatacatcattacgtgtaccacatggcggcggc
ggtatcgttcacgatgtgaaaatctttactcgtgaagctggagatgaattgtcaccaggc
gtaaacatgttagttcgtgtttatatcgttcaaaaacgtaaaatccatgaaggggataaa
atggccggtcgtcacggaaataaaggggttgtatcccgtattatgccggaagaagatatg
ccattcctacctgatggaacaccaatcgatatcatgctgaatcctttaggggtgccttca
cgtatgaacatcgggcaagtattggaattacacttgggtatggctgcacgtcagttaggt
atccacgtagcaacgccagtatttgatggtgcaagtgatgaagacgtatgggaaacagtt
cgtgaagccggtatggccagcgatgcgaaaactgttctgtacgacggacgtacaggtgaa
ccatttgatggacgtgtgtctgtcggtgtgatgtacatgatcaaacttgctcacatggtc
gatgacaaattgcatgcacgttcaatcggaccttactcattggttacacaacaaccattg
ggaggtaaagctcaatttggtggacaacgttttggtgaaatggaagtatgggcactggaa
gcttacggtgcggcttatactttacaagaaatcttgacatacaaatcagatgacgtagtc
ggacgtgtgaaaacatacgaagcaatcgtcaagggtgaaccaattccaaaaccaggtgta
ccggaatcattccgcgtattggtgaaagaattgcaatcactaggtctggacatgcgtgtc
ttggatatcgaagaaacagagatcgaacttcgcgacatggacgatgaagacgacgatttg
atcactgttgatgctttgacaaaatttgccgaacagcaaactgccaaagaattagaaaag
aaagctgctgaacaagtggaagatgaaaaagacgatgtcatccaaaactttgaaaccgca
gaagataatttagactaa
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