Enterococcus faecium Aus0004: EFAU004_01087
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Entry
EFAU004_01087 CDS
T01772
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
efc
Enterococcus faecium Aus0004
Pathway
efc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFAU004_01087 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efc03019
]
EFAU004_01087 (recQ)
03400 DNA repair and recombination proteins [BR:
efc03400
]
EFAU004_01087 (recQ)
Enzymes [BR:
efc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFAU004_01087 (recQ)
Messenger RNA biogenesis [BR:
efc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFAU004_01087 (recQ)
DNA repair and recombination proteins [BR:
efc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EFAU004_01087 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF4718
HBS1_N
Motif
Other DBs
NCBI-ProteinID:
AFC63172
LinkDB
All DBs
Position
complement(1108460..1110232)
Genome browser
AA seq
590 aa
AA seq
DB search
MNDLLKQYFGYDEFRPGQKEIIQKVIDQENVLGIMPTGSGKSICYQLPALLLDGLTVVVS
PLISLMKDQVDAANQLGIPATFINSSLDGYETARRFQEIDRQQYRLLYIAPERFIMPDFI
QAMKRWNVRMIAIDEAHCISQWGHDFRPSYLQMANQLDQLPNRPVIVALTATATVQVAAD
IKRLLKIPENNHIQTGFERENLRFQVIKDQKKEQYLIEYLKINKNQSGIIYAATRKEVDR
LYHLLKKFDFSVGRYHGGLNENERTEMQEAFLYDRLQLIVATNAFGMGINKSNVRFVIHY
QIPGSLEAYYQEAGRAGRDGLSSEAILLFSPQDIQVQKFFIQQSQREEGQKQKEYEKLKA
MTEYVYIESCLQQYILNYFGETSSPCNRCGNCLDDREIVEVTTEAQMVLSCLKRMGENYG
KQMLMKVLAGSKEQKLQALGFGHLSTYGLMKNQSQKETMQLIEYLISNGYLLTINGEYPV
LKVTERGIQVLKGQESVYRKEPKKVQQLSDEETDTLFEVLRELRTDLASEAGVPPYVVFS
DSTLKEMSRIRPSSRLEMLQIKGVGQSKLDKYGEAFLSRIKNADSNVLDK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacttattaaaacaatactttggctatgatgagtttagacctggtcaaaaagaa
attatccagaaagtcattgatcaggaaaatgtattaggaatcatgcctaccggaagtggg
aaatcaatctgttaccagcttccagctttactattagatgggcttactgtggttgtgtcc
cctttaatctctttgatgaaggatcaggtggacgcggcgaatcaattaggtatacccgcc
acttttatcaatagctcgttagatggttacgaaacagctagacgcttccaagaaatcgat
agacagcagtaccgtttactttatatcgctcctgaacgttttatcatgccggattttatc
caagcaatgaagcgatggaacgtccgtatgatcgctattgacgaggcacattgtatctct
cagtgggggcatgatttccgcccaagttatttacagatggcgaaccagctagatcaactg
ccaaatcgtcctgtaattgttgctttgacagctacagcgactgtgcaagtagctgctgac
ataaaaagacttttaaaaattccagaaaacaaccatattcagactggttttgaacgagaa
aatctacgatttcaagtaattaaagatcaaaaaaaagaacaatatctaatcgaatattta
aagatcaacaaaaatcaatctggtatcatttatgcagcaacgagaaaagaagtagaccgt
ctctatcatttgcttaaaaaattcgatttttccgtgggtagatatcatggtggtctaaat
gagaatgagcgaacagaaatgcaagaagcctttttatacgatcgcttgcagctgattgta
gcgacaaatgcatttggtatgggtataaataaaagcaatgtccgttttgttatccattat
caaattcctggctctctagaagcatactatcaggaagctggtcgggcgggaagagatggt
ctttccagtgaagccatcctgcttttctctcctcaagatatccaagtccaaaagtttttt
atccagcagtcccaaagagaagaagggcaaaagcaaaaagaatatgaaaaattaaaagcg
atgacagaatacgtgtatattgagtcctgtcttcagcaatacatcctaaactattttggc
gagacaagcagtccgtgcaaccgttgtggtaactgtttagatgacagagaaatagtagaa
gtaacgacagaagcacagatggttctttcttgcttaaaacgtatgggtgagaactatggt
aaacaaatgctgatgaaagtcttagcaggatcgaaagaacaaaagctgcaagctttaggt
tttggacatttatctacctatggactgatgaaaaaccaatcgcaaaaagaaacgatgcag
ttaattgaatatttgatatcgaatggctatcttctgaccatcaatggtgagtatcctgtt
ttgaaagtaacagaaagagggatacaagtattgaaaggacaagaatctgtttatcgaaag
gaacccaagaaagtccagcagctatcggatgaagaaaccgatacactatttgaagtgctg
cgggaactgcgaacggatctagcatcagaagcaggcgttcccccgtatgtcgtattttca
gattccacattgaaagaaatgagccgaatacgtccatcaagcagattggagatgcttcag
ataaaaggagttggccaaagcaagcttgataaatatggcgaagcctttttatctcggata
aaaaatgcggactctaacgttctggataagtag
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