Escherichia fergusonii: EFER_3825
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Entry
EFER_3825 CDS
T00811
Symbol
glyAB
Name
(GenBank) Serine hydroxymethyltransferase 2 (Serine methylase 2) (SHMT 2)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
efe
Escherichia fergusonii
Pathway
efe00260
Glycine, serine and threonine metabolism
efe00460
Cyanoamino acid metabolism
efe00630
Glyoxylate and dicarboxylate metabolism
efe00670
One carbon pool by folate
efe00680
Methane metabolism
efe01100
Metabolic pathways
efe01110
Biosynthesis of secondary metabolites
efe01120
Microbial metabolism in diverse environments
efe01200
Carbon metabolism
efe01230
Biosynthesis of amino acids
efe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EFER_3825 (glyAB)
09102 Energy metabolism
00680 Methane metabolism
EFER_3825 (glyAB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EFER_3825 (glyAB)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EFER_3825 (glyAB)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EFER_3825 (glyAB)
Enzymes [BR:
efe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EFER_3825 (glyAB)
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CAQ91260
UniProt:
B7LUQ7
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Position
complement(3921598..3922899)
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AA seq
433 aa
AA seq
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MAGCGRGFPCENHRMMNLRGKRMINNDPLFALINQEQQRQRQSLELIASENFVSPAVLAA
QGSVLTNKYAEGYYQHRYYGGCKFIDEVEMLAITRAQQLFGARYVNVQPHSGSQANQAVY
LALLKPGDKILGMSLQCGGHLTHGSPVNQSGKWFNAFHYGVDAHSGLIDMDQVEMIALRE
RPRLIIAGGSAYPRHYDFARFRRIADAVDAILLVDMAHFAGLVAGGCFPSPLAYADVVTT
TTHKTLRGPRGGMILTNDARLAKKIDSAIFPGLQGGPLMHVIAAKAVALGEALQPEFKRY
AGQVIDNAQAMCQQLALRGLTLLTGGTDCHLGIIDLRPQGLTGAQVEYFLELAGITVNKN
TLPGDPQPPSITSGVRIGSAACTTRGMKADDFALIADWISEIIFAINSADIADICADIQQ
KVIQLTNRYPLPY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtggcagggtgcggacgaggttttccctgcgaaaatcatcgcatgatgaatttgcggggg
aagcgcatgataaataacgatccactttttgcattgattaaccaggagcaacagcgccag
cggcagtcgctggaactgattgcctcggagaatttcgtaagccccgccgttctcgcggcg
caggggtcggtgttaaccaataaatacgccgaaggttattaccagcatcgctattacggt
ggctgtaagtttattgatgaggttgagatgctggcgataacccgcgcgcagcagctcttt
ggcgcgcgttacgtcaatgtgcagcctcactccggcagccaggcgaatcaggcggtctat
ctggcgttgctgaaacccggcgacaaaattcttggcatgagcctgcaatgcggcgggcat
ctcacgcacggttcgccggtcaatcaatccggcaaatggtttaacgcttttcactatggc
gtcgatgcgcacagtggtttgattgatatggatcaggtcgagatgatcgcgctgcgtgag
cgcccgcggttgattattgccggaggatcggcttatccacgccattatgattttgcccgt
tttcgccgcattgccgatgccgttgatgccattttgctggtggatatggcgcactttgcc
gggctggtggcgggcggctgttttccctcgccgctggcatatgctgatgtcgtcaccacc
accacgcataaaacgttacgcgggccgcgcggcggcatgatcctcaccaacgacgccagg
cttgcgaaaaaaatcgacagtgccatttttcccggtttgcagggcgggccgttgatgcac
gttatcgcagcgaaagcggtggcgcttggcgaggcattacaaccggaatttaaacgttat
gctgggcaggttatcgacaatgcgcaggcgatgtgccagcaactggcgctgcgcggcctg
acgctgttaacgggcggcaccgactgccatctggggattatcgacctgcgcccgcagggg
ttaaccggcgcacaggtggagtactttctcgaactggcggggatcacggtcaataaaaac
accctgccgggcgatccgcagccgccgtcgattacctccggcgttcgtattggcagcgcg
gcctgcaccacgcgtgggatgaaggcggatgactttgcgcttattgccgactggataagt
gaaatcattttcgccattaactcggcagatattgcagacatttgcgccgatattcagcaa
aaagtaatacaactaaccaaccgctacccgttgccttattaa
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