Enterococcus faecalis OG1RF: OG1RF_12493
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Entry
OG1RF_12493 CDS
T01882
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
efi
Enterococcus faecalis OG1RF
Pathway
efi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
efi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OG1RF_12493 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efi03021
]
OG1RF_12493 (rpoB)
03400 DNA repair and recombination proteins [BR:
efi03400
]
OG1RF_12493 (rpoB)
Enzymes [BR:
efi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OG1RF_12493 (rpoB)
Transcription machinery [BR:
efi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OG1RF_12493 (rpoB)
DNA repair and recombination proteins [BR:
efi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OG1RF_12493 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AEA95180
LinkDB
All DBs
Position
complement(2631367..2634990)
Genome browser
AA seq
1207 aa
AA seq
DB search
MKSLAGHVVKYGKHRERRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIDD
FQGNLSLEFVDYELKEPKYTVEEARAHDANYSAPLHVTLRLTNRETGEIKSQEVFFGDFP
LMTEMGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAK
DISYVRIDRTRKIPLTVLVRALGFGSDDTIFEIFGDSESLRNTIEKDLHKNASDSRTEEG
LKDIYERLRPGEPKTADSSRSLLTARFFDPKRYDLANVGRYKVNKKLDLKTRLLNLTLAE
TLVDPETGEIIVEKGTVLTHQIMETLGEYIDNGLNSVTYYPSEDAVVTEPMTIQVIQVLS
PKDPERIVNVIGNGYPDDSVKTVRPADIVASMSYFFNLMEDIGNVDDIDHLGNRRIRSVG
ELLQNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQ
TNPLGELTRKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSS
YAKVNKFGFIETPYRRVDRATGRVTDQVDYLTADIEDHYIVAQANSLLNEDGTFANDVVM
ARLQSENLEVAVDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIQP
RSPWVGTGMEYKSAHDSGAALLCKHDGVVEFVDAKEIRVRRDNGALDKYMVTKFRRSNSG
TSYNQRPIVHLGEKVEKGDTLADGPSMEEGEMALGQNVLVAFMTWEGYNYEDAIIMSRRL
VKDDVYTSVHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVQDGDL
LVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDEL
SPGVNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMAARQLGIHVATPVFDGATDEDVWETVREAGMASDAKTVLYDGR
TGEPFDNRISVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLD
MRVLDIEEAEIELRDMDDDDDDLITVDALTKFAEQQSAKQLEKEAESVVKEEAQDVVQEI
ETAEDRD
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagcttggctggacacgtagtaaaatacggaaagcatcgcgaacgtagaagtttc
gcacgtatcagtgaagtattggaattaccaaatttaattgaaatccaaacagactcttat
caatggtttttagatgagggacttcgtgaaatgtttgaagacattttaccaattgatgat
ttccaaggaaacttatccttagaatttgttgactatgaattaaaagaaccaaagtacaca
gtagaagaagcccgcgcacatgatgccaactattctgcgccattacatgtaacattacgt
ttaaccaaccgtgaaacaggtgaaattaaatcccaagaagtcttcttcggcgatttccca
ttaatgacagaaatgggtaccttcatcatcaacggggcagaacgtgttatcgtttcccaa
ttagttcgttctccaggtgtttacttccatggaaaagtggacaaaaacggcaaagaaggt
tttggctcaacagtcattcctaaccgtggtgcatggttagaaatggaaacagatgcgaaa
gacatttcttatgttcggattgaccgcacacgtaaaattcctttaactgtgttagttcgt
gctttaggtttcggttcagatgataccatcttcgaaattttcggcgacagcgaaagctta
cgcaacacaattgaaaaagatttacacaaaaacgcaagtgattctcgtacagaagaaggc
ttgaaagacatttatgaacgtcttcgcccaggcgaaccaaaaacagcagatagctcacgt
agcttgttaactgcacgtttctttgatccaaaacgttatgatttggcaaacgttggtcgc
tacaaagttaacaaaaaattagacttaaaaacacgtctcttaaacttaaccttagctgaa
acgctagttgatccagaaactggtgaaatcattgtcgaaaaaggcacggttttaacacac
caaatcatggaaacattaggcgaatacattgacaacggcttaaacagcgtaacttactat
ccaagtgaagatgcggtagtaactgaaccaatgacaatccaagtgattcaagttctttca
ccaaaagatcctgaacgtatcgtaaatgtgattggtaacggctatccagacgacagcgta
aaaacagttcgtccagcagatatcgttgcttcaatgagctacttcttcaacttaatggaa
gatatcggcaatgtcgatgacatcgaccacttaggtaatcgtcgtatccgttcagtaggc
gaattattacaaaaccaattccgtattggtttagcccgtatggaacgtgtggttcgtgaa
agaatgtctattcaagacacagaaacattgacaccacaacaattaatcaacatccgtcca
gtggtagcaagtatcaaagaattctttggttcttcacagttatcacagttcatggaccaa
acaaacccattaggtgagttaacccgtaaacgtcgtctatcagccttagggcctggtggt
ttgactcgtgaccgtgccggttatgaagttcgtgacgttcactactctcactatggtcgt
atgtgtccaattgaaacgcctgagggaccaaatatcgggttgatcaatagtttatctagt
tatgcgaaagtgaataaatttggtttcatcgaaacgccttatcgccgtgttgatcgtgcg
acaggccgtgttactgatcaagtagattacttaacagcagacatcgaagaccattatatc
gtagcgcaagcgaactcacttttaaatgaagatggcacatttgccaatgatgttgttatg
gcgcgtctacaaagtgaaaacttagaagttgccgtagacaaagttgactacatggacgtt
tcaccaaaacaagtagtcgcagtcgcaacagcatgtattcctttcttagaaaacgatgac
tccaaccgtgccttgatgggtgccaacatgcagcgtcaagcggtgccgttaattcaacca
cgctctccgtgggtaggtacaggtatggaatataaatcagcccatgactcaggtgctgct
ttactatgtaaacatgacggtgtcgtagaattcgtcgatgcaaaagaaattcgcgttcgt
cgcgacaatggcgcattagacaaatatatggttacaaaattccgtcgttctaactcagga
acaagctacaaccaacgcccaattgttcacttaggtgaaaaagttgaaaaaggcgatact
ttagcggatggaccttctatggaagaaggcgaaatggctttagggcaaaacgtcttggtt
gccttcatgacatgggaaggttacaactacgaggatgccattatcatgagccgtcgttta
gttaaagacgatgtctacacttctgtgcatattgaagaatatgaatcagaagcacgtgat
acaaaattaggacctgaagaaattacccgtgaaattccaaacgttggggaagacgcattg
aaagacttagacgaaatggggattatccgcattggtgctgaagttcaagatggcgactta
ctagttgggaaagtcacacctaaaggggttacagaattatctgcagaagaacgtttatta
cacgcaatcttcggggagaaagcccgcgaagttcgtgatacgtctctccgtgtacctcac
ggtggtggcggtatcgttcatgatgtgaaaatctttactcgtgaagctggcgatgaatta
tcaccaggtgtcaacatgttagttcgtgtctatatcgttcaaaaacgtaaaattcacgaa
ggagataaaatggcgggacgtcacggaaataaaggggttgtttcccgtattatgccggaa
gaagatatgccattcttacctgacggaacacctgttgatatcatgttgaacccattaggg
gtaccttctcgtatgaatatcggacaagtacttgaattacacttaggtatggctgctcgc
caattaggtattcacgtcgcaacacctgttttcgatggggcaaccgatgaagacgtttgg
gaaactgttcgtgaagctggtatggctagcgatgctaaaacagttctttacgatggacgt
acaggtgaaccatttgataaccgtatttccgttggtgtcatgtatatgattaaattagcc
cacatggttgatgacaaattgcatgctcgttcaatcggaccttactctcttgttacgcaa
caaccgttgggtggtaaagctcaattcggtggacaacgtttcggggaaatggaagtttgg
gcactggaagcttacggtgctgcttacacattacaagaaatcttaacttacaaatctgat
gacgttgtcggacgtgtgaaaacatacgaagccatcgttaaaggtgaaccaattccaaaa
ccaggtgtgcctgaatcattccgagtattagtgaaagaattacaatcacttggtttagac
atgcgtgtcttggacattgaggaagctgagattgagttacgcgatatggacgatgacgat
gatgatttaatcaccgttgacgcactaaccaaatttgcggaacaacaatcagcgaaacag
ctggaaaaagaagcagaatcagtcgtgaaagaagaagcacaagacgttgttcaagaaatt
gaaacagccgaagacagagactaa
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