Epinephelus fuscoguttatus (brown-marbled grouper): 125881100
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Entry
125881100 CDS
T08419
Symbol
trim8b
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8b
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125881100 (trim8b)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125881100 (trim8b)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125881100 (trim8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_10
RING_XB3-XBAT31
RT_RNaseH_2
DUF3287
TRIM_CC
U-box
DUF3584
DUF16
Motif
Other DBs
NCBI-GeneID:
125881100
NCBI-ProteinID:
XP_049420049
LinkDB
All DBs
Position
LG20:complement(28121147..28133825)
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AA seq
595 aa
AA seq
DB search
MPTRTMMASDMAETWRNCFEEELICPICLHVFSDPIQLPCKHNFCRGCISEAWAKDSSLA
RCPECNHAYTQKPSLEKNHKLSNIVEKYNALSVEKATTPALQCILCRRGPPLPAVKVCLR
CNAPCCQSHVQTHLQQPCSALGHLLVEAEAVKAWTCLQHDEYRLYHCEAEQTAVCQYCCF
ARCHPSHGHAVTDVELRRNDIRQSLLRQQERVEERVQEIEEQLCKLDSDKCVVEDRVCEL
KEEVRLQYQRMHQLLEEDLGRTLEALDRAQARFCQENAAQVLALGEQRHEAQKLLSSIHT
AFSKAEELSFMKNTKPVKILTDRSQACVGSSLPPYKVGNLNSKLFLSEISKREKSLKRTL
EAPLTPPSTFLQSVPAYPSGQSSGSGAEKRKHSTAFPEGNGNVGKNAAPGFKDSSSSSSS
SSSSSLAKQPYLGSSSASGEGQSTNQQPLGPCGPPHISESGGTGSGSGSLTNHHSGSVFG
SSHFPPGGSSSSHSSQQAVLPQYGGRKILVCTMDNCYCSGVPSVSGHRSHPPYPRSGSFP
WVSAQDYPPPPGLASGGPSMQGLAVRDWIDASQTHRHADFYGLYGQPSTKHYVTS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcctacccgcaccatgatggcctctgacatggctgagacatggaggaactgttttgag
gaggagctcatctgccccatctgcctgcacgtgttctcagatcccatccagctgccctgc
aagcacaacttctgccggggctgcatcagcgaggcctgggccaaagactcctcactggcc
cgctgccctgagtgcaatcatgcttacacgcagaagcccagcctggagaagaaccacaaa
ctgtccaacatagtcgagaagtacaacgccctgagcgtggagaaggccaccacgccggcg
ctgcagtgcatcctgtgccgccgaggcccgccactccctgcagtgaaggtctgtctccgc
tgcaacgccccttgctgccagtcccacgtccagacacacctgcagcagccctgctcagcc
ctcgggcacctgttggtggaggcggaggcggtgaaggcctggacctgcctgcagcacgac
gagtacaggctgtaccactgcgaggccgagcagacagcggtatgtcagtactgctgcttc
gcccgctgccaccccagccacggccacgccgtcactgacgtggagctgcgacgcaacgac
atcagacaaagcctgttacgacagcaggagcgcgtggaggagcgagtgcaggagatcgaa
gaacagctctgcaaactcgactctgacaagtgtgtggtggaggacagggtgtgtgagctg
aaagaggaggtgcgtctgcagtaccagcgcatgcaccagctcctggaggaggatctcggt
cggacactggaggctctggaccgggctcaggctcggttctgccaggagaacgctgcccag
gttctagctctgggcgagcagcgccacgaggcccagaagctgctgagctccatccacacg
gccttcagtaaggcggaggagctgagcttcatgaaaaacaccaagccggttaaaatcctc
acagacaggtctcaggcatgtgtgggcagcagtctccctccttacaaagtggggaattta
aactctaaactgttcctctcagaaatctcaaaaagagagaagagcttgaagagaacgctg
gaagctcccctcacccctccatcgaccttcctgcagtctgtccctgcgtatcccagcggt
cagagctccggctctggagcagagaaacggaaacattccactgccttcccagagggaaac
gggaacgtcggaaaaaatgccgctcctggtttcaaggactcctcctcctcctcttcctcg
tcttcttcctcatcgctagccaagcagccctacctgggctccagctctgcctccggagaa
ggtcagtccaccaatcagcagcctctcggcccctgcggcccgcctcacatcagcgaaagc
ggtgggacgggaagcggaagcggctctctgaccaaccaccattcaggctccgtgttcggc
tcctcacactttcctcctggaggcagcagctcctcgcactcctcccagcaggccgtgctg
cctcaatacggtggccgtaagatcctggtgtgcacaatggataactgctactgctccgga
gtgccctcggtgtcgggccaccgcagccatcccccgtacccgcgctctggctctttcccc
tgggtcagcgcccaagactaccccccgcctcccggcctggcctctggaggtccgtccatg
cagggcttggcagtgagggactggatagacgcctcgcagacacacagacatgcagatttt
tacgggctgtacgggcagccttctacaaagcactacgtcaccagttaa
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