Epinephelus fuscoguttatus (brown-marbled grouper): 125887922
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Entry
125887922 CDS
T08419
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125887922 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125887922 (cnot1)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125887922 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125887922 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
125887922
NCBI-ProteinID:
XP_049431013
LinkDB
All DBs
Position
LG4:8464226..8491318
Genome browser
AA seq
2388 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFIATLCYAIDNPLHYQKSLKPSAHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LQLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCASLDECRNIIIQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTYE
LDHPGFIIRDSKGLHIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFS
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISPSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDSLSGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGTGIGSGIGSSLGMSTVNTDPFGTRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKE
IDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFP
QYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAALDRFKN
RLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALAQV
QAQSQQPGVPKAPQPGQPSTLVTTTTTTTTVAKTPTITRPTPSSFKKDVPPSINTTNIDT
LLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMK
RVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGH
WLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRPQNP
WTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGSLLKDKEKLKSLEEQLS
APKKEAKPPEEMLPVSTTGDFVPFAAPPSTPAATTTTCTTTGPPTPQFSYHDINVYALAG
LAPHININVNIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIRKDFA
LDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQREMME
EAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQ
AERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWATDDV
AQIYDKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVALARNSRDGIAALGLLQKAVEG
LLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAV
ELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADLFHTI
ETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGL
REKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVE
ISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLG
IVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRP
TKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPM
QILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTP
NLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGN
RYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLN
AIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIE
LIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaactaccgagccagccagcaagaaatacagcatattgtaaatcgtcacggt
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaggactttcaccagacacagtttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaactttatcgctactctgtgctacgccattgacaatcccctgcac
taccagaagagtttgaagccatcggcccacctgttcactcaactgagtaaagttctcaag
ctcagcaaggtccaagaggtgatatttggacttgctttgctcaactccagcaacgcagac
cttcgtggttttgctgcacagttcatcaagcagaaacttccggaccttctgcggtcatac
gttgacgcggatctcggaggaaaccaggaaggtggcttccaagacattgccatagaggtc
ttgcaactactgctctcccatctactgtttggccagaagggagccagtggggtagggcaa
gagcagattgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcatggacaggatccta
ccagactcgggggagttagctaagaccatgatggagagttctctcgcagaattcatgcaa
gaagttggctatggcttctgtgctagtctggatgagtgcagaaacataatcattcagtat
ggggtgagagaggtgactgccagccaggtagccagggtccttggcatgatggctcgtacc
cactctggccttactgatggcatcccacttcagtccatctcagctccaggaagtggtatc
tggagcgatggtaaggataagaacgatggctcgcaggcacacacttggaacgttgaagtt
ctcatcgatgtcgtgaaagaagtgaatcccaacctgaacttcaaagaggtgacatatgaa
ctggaccacccaggatttataatccgggacagtaaaggcctgcacatagtggtgtatggc
attcagagggggttgggcatggaggtcttccctgttgatctcatctatcggccatggaaa
catgcagagggacagctgtcattcattcagcactccctgatgagcccagaagtgttttcc
tttgctgactacccttgccacaccgtggctattgacatccttaaagccccaccagaggat
gacaacagggagattgccacctggaaaagtctggacctggtggagagtctgctcagactg
tctgaggtgggccagtatgagcaggtgaagcagctatttagctttccaatcaagcactgc
ccagacatgttggtcctggcattgctgcagatctccccctcctggcacacactgcgccat
gagctcatctctaccctcatgcccatcttcctgggcaaccacccgaactctgccattatc
ctgcactacgcctggcatggacagggacagtctccctccatccgtcaactaattatgcat
tcaatggctgagtggtacatgagaggggagcagtatgaccaagctaagctgtctcgcatc
ctggatgtggcacaggacttgaagtctctatcgatgttgctgaatggtactccctttgcc
tttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgataaatgg
ctaactgacaaaatcagagagcatggggaaccttttatccaggcctgtgtgacattcctg
aagagacgctgcccatccattatggggggtctggccccagacaaggaccagcccaaaagt
gcccagctacccccggagaccttagccaccatgctggcctgcctgcagtcctgtgcaggg
agcgtgtcgcaggagctgtcagagactatcctgaccatggttgccaactgcagcaatgtg
atgaataaagcccggcaaccaccaccaggggtaatgcctaagggacgtgcccccagcacc
agcagcctggatgccatctctcctgtacagatggactctctgtctggtatgggttccttg
aacctggggggcacagccacctcccatactcaaagcatgcagggtttcccaacctcactg
agttcagctttcagtaatccccagtccccagcaaaggccttcccaccactgtccaacccc
aaccccagcacaccatttggtggcataggcagcctgtcctcgcagcttcccggtatggac
tctggtcctctgggcacgggcattggctccggtattggctctagtctgggtatgtcaacc
gtgaacaccgacccttttggcaccaggaagatgagcacaccaggcctgaacccaccaacc
tttcagcagactgacctttctcaggtgtggcccgaggcaaaccagcactttagtaaggag
atcgatgatgaagcaaacagttatttccagcgcatctacaaccacccacctcacccaact
atgtctgtggatgaagtactggaaatgctgcagagattcaaggattcaaccatcaagcgg
gaacgagaggtgttcaattgcatgctacggaacttgtttgaggaataccgattcttcccc
cagtacccagacaaggagctgcacatcactgcctgcctttttggtggcattattgagaag
ggtcttgtcacctacatggccctgggcttggccctccgatatgttcttgaagccttaaga
aaaccctatggatccaaaatgtattattttggaattgccgccctagataggtttaaaaac
agactaaaggactatcctcaatattgtcaacacctggcttcaattgcacacttcttgcaa
ttcccccaccatttacaagagtgcgtgcagtatatcgagtatggccaacagtcacgggac
cctccggtgaagatgcaaggctccatcaccacacctggcagtctggcacttgcacaagtc
caagcccagtcgcagcaacctggcgtccctaaagccccacagccaggtcagcccagcact
ctagtcaccaccaccacgactacaaccacagtagccaagacccctaccatcacaagacca
acacccagcagcttcaagaaggatgtgcctccctctataaacacaaccaacattgacacc
ctgctggtggccactgaccaaacagaaaggattgtagagcctccagagaatgttcaggag
aagattgcttttatcttcaacaacctttctcaatccaacatgacccaaaaggttgaggag
ttgaaagagacggtgaaagaagagttcatgccctgggtgtcacagtacctggtgatgaaa
cgtgtcagcattgagcccaacttccacagtctctattccaactttctggacactctcaag
aaccctgagtttgtgaagatggtcctcaatgagacttacaggaatatcaaggttctgttg
acctctgacaaggcagctgccaatttctctgatcgctccctgctgaagaacttgggccac
tggttgggcatgattacactggccaaaaacaagcctatcctttacacggatctggaagtc
aagtctctgctactggaagcctatgtgaagggccagcaggagctactgtatgtggttccc
tttgtggcaaaggttttagagtccagtctacgaagcatggtcttcaggccgcagaacccc
tggaccatggccatcatgaatgttctcgctgagctgcatcaagaacatgacctcaagctg
aacttaaagtttgaaattgaagttctgtgtaagaacttgtctttggacatcaatgacctc
aagccaggaagcttgctgaaggacaaagagaagctaaagagcctggaggagcagctgtct
gcaccaaagaaagaggcgaagcctccagaggagatgctgccagtttctaccacaggagac
tttgttccatttgcagcccctccctcaaccccagctgccaccaccaccacttgcacaacc
accgggccccccaccccacagttcagttaccacgatatcaatgtgtatgccttggcaggc
ctggctccacacatcaatatcaatgttaatatcccattgctacaggcccatcctcagttg
aagcagtgtgtacgtcagtcagtagagcgagctgttcaggagctggtgcaccctgtggtt
gaccgctctatcaaaatagccatgacgacctgtgagcagatcatcaggaaggactttgcc
ctggattcagaggagtcccgcatgcgtgtggctgcccaccatatgatgagaaacctaact
gctggcatggccatgatcacctgccgcgagcccctgctcatgagcatcgccaccaacctt
aagaacagctttgctgctgcactaagggcaccaaccccccaacagagggaaatgatggaa
gaggctgctgcaaggattgcacaagacaactgtgaactggcttgctgtttcattcagaaa
acggctgtggaaaaggctggccctgaaatggacaagagactagccacggagtttgagctg
aggaagcatgcacgccaagagggtcgtcggtactgtgatcctgttgttctgacttaccag
gctgaacgaatgccagagcagatcagactcaaggtgggaggagtggacccaaagcaactg
gctgtatatgaggagtttgccaggaacgttccaggtttcttacccagtaatgatctctcc
cagcccactggctttttggctcagcccatgaagcaacaggcatgggccacagatgatgtg
gctcagatctacgataagtgcatggcagacttggagcaacatcttcatgccatccctcca
gcccttgccatgaaccccttgacccaggctctacgcagcctgctggaagctgtggccttg
gctaggaattccagggacggcatcgccgcacttggccttctgcagaaggctgtggaaggt
cttctggatgctactagtggagctgatgctgacttgctgctacgctacagggagtgccac
ctgctggtgcttaaagccctacaggatggacgtgcctatggaccacagtggtgcaataaa
cagatcaccaggtgtctgattgaatgccgtgacgagtacaaatacaacgtagaagcagtg
gagcttctgatcaggaaccatcttgtgaatatgcagcagtatgacctgcacctggcacag
tcaatggaaaacggactgcactatatggcagttgcattcgccatgcagttggtgaagctc
ctgctagtggatgaacgcagtgtcagccatgtcacagaggctgacctcttccacacaatt
gagactttgatgaggacctgtgcacactccagagccaacgcacctgaaggccttccccag
ctgatggatgttgttcgctccaactatgaggccatgattgacagggcccacggaggaccc
aacttcatgatgcactctgggatttcacaggcttcagaatatgatgatcctccaggcctg
agggagaaggcagagtacctcctgagggaatgggtcaacctgtaccactcagctgcagct
ggcagggatagcaccaaagctttctctgcttttgttggccagatgcaccagcagggcatc
ctgaagacagatgacctgatcacaaggttcttccggctgtgcacagaaatgtgtgtggag
ataagctatcgggcgcaggctgagcagcagcacaacccagcagccagtgcagccatcatc
agagccaagtgttaccacaacctggatgcctttgtgaggctcatagccctgctggttaaa
cactctggagaggccaccaacacggtgacaaaaatcaacctcctaaacaaggtgctcggt
attgtagttggggtgctaatccaggaccacgatgtccgtcagacagaattccagcagcta
ccataccaccgcattttcatcatgctgctgttggagctcaacgctcccgaacatgtcctg
gagaccatcaacttccagacactcactgctttctgcaataccttccacatcctgagacct
accaaagcaccaggttttgtgtacgcctggctggaactcatctcccatcgcatcttcatt
gccaggatgttagcacacacaccccagcaaaagggttggcccatgtatgcacagctgctg
attgatctattcaagtacctggccccattcctgaggaatgtagagctcaacaaacctatg
caaatcctctacaagggcacactgcgagtgctcctggtcctgctgcatgacttcccagag
ttcctgtgtgactaccattatggcttctgcgatgttatcccacccaactgcatccagctc
cgcaacctcatcctcagtgcctttccacgcaacatgaggctccctgaccctttcacaccc
aatctcaaggtggacatgctgagcgagatcaacatcgcgccccgtattctaaccaacttc
acaggcgtaatgccttcccagttcaagaaggatctggactcatatctgaagactcgttca
ccagtcaccttcttgtctgagcttcgcagcaacctgcaggtgtccaacgagccaggaaac
cgctacaacatccagctgatcaatgctctagtgttgtatgtaggcacacaggcaatcgct
cacatccacaacaagggcagcaccccctctatgagcactatcacccactctgcacatatg
gacatcttccagaacctggctgtggacctggacactgaggggcgatacctgttcttgaac
gcgatcgccaatcaactgcgctaccccaacagccacactcactacttcagctgcaccatg
ctgtatctgtttgctgaggccaacacagaggccatccaggagcagatcaccagggttctg
ttggagaggctgattgtgaacaggccccacccatggggtctgctcatcaccttcattgag
ctgatcaagaatcctgccttcaagttctggagccacgactttgtgcactgtgcccctgag
attgaaaagctgttccagtcagtagcccagtgctgcatggggcagaagcaggcccagcag
gtgatggagggcaccggtgccagctag
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integrated database retrieval system
