Epinephelus fuscoguttatus (brown-marbled grouper): 125904961
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Entry
125904961 CDS
T08419
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125904961 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125904961 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125904961 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
efo00535
]
125904961 (col9a2)
Proteoglycans [BR:
efo00535
]
Extracellular matrix (ECM) proteoglycans
Others
125904961 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
125904961
NCBI-ProteinID:
XP_049458635
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Position
LG17:complement(30800546..30820856)
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AA seq
691 aa
AA seq
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MAALSALLKTWVILQTLCLALAQVRGPPGPQGQPGPAGPSGTPGSDGIDGDKGPPGPPGP
PGQKGEPGEPGPDGAPGENGIDGLIGAKGDRGPIGSPGPKGQPGPSGEPGAPGPGLPGLS
GAPGPIGLPGEIGPSGPKGVIGSPGAPGLPGPPGKPGPPGKFIGGEEGSADFQCPLNCPA
GPKGPQGLQGVKGHKGRAGVLGEPGSIGKPGPKGEVGISGEQGIPGPSGPMGLRGYPGMM
GPKGEAGPRGYKGINGPVGIPGPPGEEGPQGPPGDAGDKGDKGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGSPGQAGMPGPPGPQGAAGLPGSPGSKGGPGAKGEPGPRGHS
GMPGAPGPLGEPGLPGEAGMEGVPGPKGDRGQRGEVGPQGVVGKPGGKGERGPIGIPGAQ
GLTGTKGDKGFQGKVGSKGDDGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDTGHNGPT
GDPGKPGDQGPPGLPGPRGLNGERGVPGMPGIQGASGRDASDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGSPGPQGPHGLTGARGIPGMIGAPGQIGNTGLKGKR
GPKGERGDPGKPHPGPPGPPGIQGPPGVDGVARDGRHGERGPQGSAGEAGRPGKAGPSGL
PGYCEAAMCLAASAYTSPRLQEAGTIKGPNV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctcagccttgctgaagacctgggtaatactgcagaccttgtgcctggct
ctggctcaagtgaggggtccacctggaccacagggccagcccggcccagcaggcccctcc
ggcacccctggatcagacggcattgatggagacaaaggacctcctgggccccctggacca
ccaggacaaaagggagagcccggagagccaggtcccgacggagcaccaggagagaatggt
attgatggtttgattggagcaaagggtgatcgaggtcctatcgggagcccgggccccaag
ggtcaacctggacctagtggcgaacctggagctccgggaccgggccttccaggactgtct
ggagctccagggccaattggacttccaggtgaaatcggaccatctggaccaaagggtgtc
attggatcacctggagctccaggactccctggacctcctggcaagccaggtcctcctggg
aagttcattggtggagaagagggcagtgctgacttccagtgtcctcttaactgtccagca
ggacctaaaggcccccagggactgcagggagtcaagggacacaaaggacgtgccggtgtt
ctcggagagcctggcagcataggaaaaccgggccccaagggagaagtgggcatctctgga
gaacagggcatcccaggaccttcgggtccgatgggtctgagaggttacccagggatgatg
ggtcctaaaggggaagcaggacctcgtggttacaagggcatcaacggacctgtaggaatt
cctgggcctcctggtgaggagggacctcagggaccacccggagatgcaggagacaaggga
gacaaaggcagccgaggtatccagggcccacagggcgcggttggcaaaaagggagagaat
ggtctgccgggtattgatggaaaagatggcacacctggtattcctggaatcaagggcagc
cctggccaggctgggatgcctggacctcctggtcctcagggagcagcgggattgcctggc
agcccagggtcaaaaggtggacctggggctaagggcgagcctggacccaggggtcactct
ggcatgcctggtgcccctggacctctgggtgagcctggtcttcctggtgaggctggtatg
gaaggagttcctggacccaagggtgacagaggccagcggggagaagttgggccacaggga
gttgtcggcaagcctggaggcaaaggagagagaggacccattggtattccaggtgctcag
ggtctaactggaaccaaaggagacaagggcttccaaggaaaagtcgggtcaaagggagat
gatggtgaccccggtgttgaaggattggctggcgagaaaggtgaaaagggtttgtctggt
gaacccgggcccaaaggacagcaaggaattaggggtgacaccggacacaatggacccact
ggagaccctggaaaacctggagaccagggaccgccaggactgcccggtcctaggggactt
aatggagagcgaggagtacctggcatgccaggcattcagggagcatcaggacgcgatgca
tctgaccagcatattattgaagtggtgttgaagatgttgcaggagaggctagctgcagtg
gcggtgagcgccaagagggctgtgcttggtggagcaggagttatgggacctcccggacct
cctggacctccagggtcacctggccctcaggggccacatggcttaactggtgcccgtggc
attcctggcatgattggagcacctggtcagattggaaacacaggacttaaaggaaagaga
gggccaaaaggagaaagaggagaccctggtaaaccccacccaggaccacctggaccccca
ggaatacaaggtcctcctggtgttgatggcgttgctcgagacggtcggcacggcgagaga
ggaccccagggatcagccggagaggctggtcgccccggtaaggcgggaccatcaggtctc
ccaggttactgcgaggcggcaatgtgtttggctgcgtcagcctacacctcaccgagacta
caggaggcgggaacaatcaaaggaccaaatgtttag
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