Epinephelus fuscoguttatus (brown-marbled grouper): 125905225
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Entry
125905225 CDS
T08419
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04145
Phagosome
efo04814
Motor proteins
efo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125905225
09142 Cell motility
04814 Motor proteins
125905225
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125905225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efo03036
]
125905225
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125905225
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
125905225
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125905225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
125905225
NCBI-ProteinID:
XP_049459070
LinkDB
All DBs
Position
LG17:complement(28372447..28448770)
Genome browser
AA seq
650 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIRQEKKIKEEERKKKEVRKKSESQQKRESTPEDSDLDRKR
RETEALLQSIGISPEPPLVPTPVSPSKSVSTPSETGSQDSADGGAAGRSGFSKNKSQAQS
SRTLQWDTDPSVLQLQADSELGRRMQRLGASKITQVDFLPKEVVSYCKETQTPLTAHLSE
VEEEEEDEEMMEAKPGPESEQQDEDDNRETKEGSFPVLRELTEEERQQILHSSEFQSFFD
CSIRVMERALAEDSNIFFDYSGRDLEDKEGDLGSGSSLSFSRLFYDEHWSKHRVITCLDW
SPQYPELLVASYNNNEDAPHEPDGVALVWNIKFKKATPEYIFHCQSPVVSVGFARFHPNL
VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRM
CSWSLDMLSQPQETMELVYNKSKSVAVTGMAFPTGDVNNYVVGSEEGTVYNASRHGSKAG
ICDMFEGHQGPVTGISCHSAVGTVDFSHLFITSSFDWTVKLWSTKHNKPLYSFEDNADYV
YDVMWSPVHPAIFAAVDGMGRLDLWNLNNDTEVPTASVTIEGASALNRVRWSSGGKEVAV
GDSEGRVWIYDTGELSVAHTDDWARFARTLMEIRANRADGEEEGPMELAS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagtgacctaaaagcagagctggagcgcaagaagcagcgcctcgcccaa
atcaggcaggaaaaaaagataaaggaggaggagaggaagaagaaagaggtaaggaaaaaa
tcagagagccagcagaagagagagtccaccccagaggattcagacttggaccgtaagcgc
agggagactgaggccctgctacagagtattggcatctcaccagagcctccactagtcccg
acccctgtgtccccctccaaatcagtgagcacgcctagtgagacgggaagccaggattca
gctgatggaggagcagcaggcaggtcaggtttctctaaaaacaagtcccaagcacagagc
tcaaggacgctgcagtgggacacagacccctctgtgctgcagctgcaggctgattctgag
ctcgggcgcaggatgcagaggctgggggcctccaagatcacacaggtagacttccttccc
aaagaggtggtctcttactgcaaggagacacagactccactcacagcccacctgtctgaa
gtagaggaggaagaggaagatgaagagatgatggaggcgaagccaggccccgagtcagag
cagcaggatgaagatgacaacagggaaaccaaagaaggctcatttccagttctgcgggag
ctgacggaggaggagaggcagcagatcctgcattcttctgagtttcagagtttcttcgac
tgcagcatccgggtgatggagagagctctggccgaggacagcaacatcttctttgactac
agtggccgggacctggaggacaaagagggagacttgggtagcggctccagtctgtccttc
agtagactcttctacgatgagcactggtctaaacatcgcgtgatcacctgccttgactgg
tcccctcagtatcctgagttgctggttgcctcctacaacaataatgaagatgctcctcat
gaaccagatggtgttgctctagtatggaacatcaaatttaagaaggccacaccagagtac
atctttcattgtcagtctcctgtagtatctgtgggctttgcaaggtttcatcccaacctg
gtggtcgggggcacttactcaggacagattgtcctgtgggataatcgcagtcatcgtcgg
acccctgtccaaaggactcctctgtctgctgctgcgcacactcatccagtatactgcgtg
aatgtggtcggcacccagaacgccaacaacctgatcactgtgtctacagatggcaggatg
tgctcctggagtctggacatgctttcccagccgcaggagaccatggaactggtgtacaat
aaatccaaatctgtggcggtgacaggcatggcttttcccacgggagacgttaacaactat
gtggtcgggagtgaggagggcactgtgtacaatgcatccagacacggcagcaaggctggt
atctgtgacatgttcgaaggccaccagggtccagtgacgggcatcagctgtcacagcgca
gtgggcaccgtcgacttctcccacctctttatcacttcctccttcgactggaccgtcaaa
ctctggagcaccaagcacaacaagcctctgtactcgtttgaggacaacgccgactatgtg
tatgacgtcatgtggtcgcctgtacatcctgcgatcttcgccgccgtggatggcatgggc
cgcttagacctgtggaacctcaacaacgacactgaggtaccaactgccagtgtgacgatc
gagggcgcttcggccctcaacagggtccgctggtcatctgggggaaaggaggtggctgtg
ggcgactcagaaggtcgagtctggatctacgatactggagagctgtcagtggctcacact
gacgactgggcacgcttcgctcgtaccctgatggagatccgtgctaaccgggcggatggt
gaagaggaggggcctatggagctggcttcatag
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integrated database retrieval system
