Enterococcus faecalis Symbioflor 1: EFS1_0990
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Entry
EFS1_0990 CDS
T02399
Name
(GenBank) helicase, putative
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
efs
Enterococcus faecalis Symbioflor 1
Pathway
efs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFS1_0990
09124 Replication and repair
03420 Nucleotide excision repair
EFS1_0990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efs03021
]
EFS1_0990
03036 Chromosome and associated proteins [BR:
efs03036
]
EFS1_0990
03400 DNA repair and recombination proteins [BR:
efs03400
]
EFS1_0990
Enzymes [BR:
efs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EFS1_0990
Transcription machinery [BR:
efs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EFS1_0990
Chromosome and associated proteins [BR:
efs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EFS1_0990
DNA repair and recombination proteins [BR:
efs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EFS1_0990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Helicase_C
PhoH
Methyltransf_15
IstB_IS21
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCO72068
LinkDB
All DBs
Position
1018890..1021271
Genome browser
AA seq
793 aa
AA seq
DB search
MKSTRKIAVRQVVEFILRRGSIDSRHVSEHTPQEGSRLHRMLQKEAGSLYQKEVSLKIEV
PLNGHNYCVEGRADGIFVKETGQVVIDEIKTSEPAFEELPPEKVELFWYQAMCYGHMYCQ
QEQLSEITLQLTYYQTTTKQITRQERHFTEAALAEFFTDLMKRYEQWVIFKEEWRILRNK
SLKNLSFPYGEYRKGQRELAVAVYKTILSKQRLFVEAPTGTGKTMSTLFPAMKAIGEEEG
ERIFYLTAKTITRQVAEDAVKALSEKQAQTKSITLTAKDKICFLTERNCTPEHCPFADGY
YDRLNEGLWDLLQHENHLTREVIERYAQKHQLCPFELSLDASLWCDLIIGDYNYLFDPTV
YLRRFFEEPQSAEENIFLVDETHNLVNRSREMYSAAISRNAVLQIQKRLQKESIQLKRAC
QKVLTTFDDIEAICEEKDTDFFAQRAPIDSLVKQIHRLTEVIAEWLPENQHIEELASILS
FYFDCLSYLRISEYYDNGFYTSISLRNYDCVVKQFCVDPAYLLSQRLDKGKASILFSASL
TPLNYYQEVLGGGEESLRYRIPYPFPEENQLLMIGSHLQTTYKNREKSYPQISELLGKLS
ETKTGNYLIFFPSYAYMDDVYQVFSQRYPQVKTQIQGTDLNEKEREAFLAEFKENPQETF
IGFCVLGGIFSEGIDLKGTRLIGTIIVSVGLQQMNPEQELIRTFYQEERGQGFQFAYQIP
GMNKVLQAAGRVIRDAQDKGFVLLLDERFELPSVQRFFPPHWLAHRKANTNEQLIQQVKQ
FWLKNKENKGGNK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcaacgagaaaaattgcggtgcgtcaagtggtcgaatttattttaaggcgggga
agtatcgattctcgccatgtgagtgaacatacaccacaagaaggtagtcgccttcatcga
atgttgcaaaaggaagcggggagcctttatcaaaaggaagtatctttaaaaattgaggtg
cctttaaatggccataattattgtgtagaaggtcgtgcagacggcatttttgtgaaagaa
actgggcaagtggtcattgatgaaattaaaacatccgagccagcgtttgaagaattgccg
ccagaaaaggtcgaattgttttggtatcaagcgatgtgttatggtcacatgtattgccaa
caagaacaactttctgaaataacgctgcaactcacttattatcagaccaccacaaaacaa
atcacacgacaagaacgccattttacagaagctgcattagcggagttttttactgatttg
atgaagcgctatgaacagtgggtaatttttaaagaagagtggcgtattttgagaaataaa
tcattaaaaaatcttagttttccttacggggagtatcgcaaagggcaacgagaattggcg
gtagccgtctataaaacaattcttagtaaacagcggctcttcgtggaagcaccaactgga
acaggcaagacaatgtccactctttttccagcgatgaaagcaattggtgaagaagaaggc
gaacggattttttatttaacagctaagaccattacgcggcaagtggctgaagatgccgtc
aaagcgctgtccgaaaaacaagcgcaaactaagagtattacgttaacagcaaaagataaa
atttgttttttaactgaacgaaattgtacaccagaacattgcccgtttgctgacggctat
tatgatcgtttaaatgagggactgtgggatttattgcaacatgaaaatcatttaacgaga
gaggttattgaacggtatgcacaaaagcaccaattgtgtccattcgagttgtcgctagat
gcaagtctttggtgtgatttaattattggcgattacaattatctatttgatccaacggtt
tatttacggcgcttctttgaagaaccccaaagtgcagaagagaatatttttttagtggat
gaaacccataatttggttaatcgttcacgggagatgtattcggccgctatttctaggaat
gcggttttgcaaattcaaaaaagattgcaaaaagaatctattcaattaaaaagagcttgt
caaaaagtcttaactacgtttgatgatattgaagcaatctgtgaagaaaaagacacggat
ttttttgcccaacgtgcgccaattgattcattagttaaacagatacatcgattaacagaa
gtaattgcagaatggttgccagaaaatcaacacattgaggaattggcgtcgattctcagt
ttttattttgattgtttaagttatcttcgaatcagcgagtattacgacaacggcttttat
acgtctatttctttgcgaaactatgactgcgttgtgaaacaattttgtgtcgatccggct
tatttattgtcacaacgattagataaagggaaagcgagtatcttattttcggcaagttta
acacctctgaattattatcaagaagtgcttggtggaggtgaagaaagcctacgttatcgg
attccgtatccttttccagaagaaaatcaattgttgatgattggtagtcatctccaaaca
acctataaaaaccgtgaaaaaagttatccacagattagtgaacttttagggaagttaagt
gaaacaaaaacaggtaattatttaattttcttcccttcttatgcctatatggatgatgtc
tatcaagtatttagccaacgctatccgcaagtaaaaactcaaattcagggaacggactta
aacgaaaaagagcgagaagcatttttagctgaatttaaagagaatcctcaagaaactttc
atcggtttttgtgttttaggtggtatattttcagaaggaattgacttgaaaggtacccga
ttgattggtacgataattgttagtgtcgggctacaacaaatgaatccggagcaagaactg
attcgcactttttatcaagaagagcgagggcaagggtttcaatttgcgtatcaaattcct
ggcatgaataaagtcttgcaagcggctggacgtgtcattcgagatgcgcaagataaaggc
tttgtgttgttattagacgaacgatttgaattaccaagtgtccagcgtttctttccgccg
cattggttggcgcatcgaaaggcaaacaccaatgaacaactcattcaacaagtgaaacaa
ttttggttaaaaaataaagaaaacaaaggaggaaacaaatga
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