Eggerthella guodeyinii: GS424_004125
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Entry
GS424_004125 CDS
T07376
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
egd
Eggerthella guodeyinii
Pathway
egd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GS424_004125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egd03021
]
GS424_004125
03400 DNA repair and recombination proteins [BR:
egd03400
]
GS424_004125
Enzymes [BR:
egd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GS424_004125
Transcription machinery [BR:
egd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GS424_004125
DNA repair and recombination proteins [BR:
egd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GS424_004125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QOS69045
UniProt:
A0A6L7IUE5
LinkDB
All DBs
Position
1021476..1025012
Genome browser
AA seq
1178 aa
AA seq
DB search
MAQGKTTDQTSLYRDRRSFAKIPDVMDVPNLIAIQTDSFEFFKGEGLAQAFQDISPIENN
TKDMCVEFGKHEFGEPKYTVDECKEKDVSYQAPLFVEIRFINRETGEIKEQDVFMGDFPL
MTPRGTFIINGTERVVVSQLVRSPGVYFASERDKASDKVLFNAKVIPSRGAWLEFETDKR
DILSVRIDRKRKQPATLLVRALGLAETREEIIELLGNDEMVLRTLDRDPATTKEESLIEL
YKRFRPGEPPTIDSARTLLEGLFFNPQRYDLAKVGRYKINKKLGFDPDYEASTLTNDDIV
RTMQYIVALHAGDEGVQTDDIDHFGNRRIRTVGELIQNQFRIGLSRMERVVRERMSMQEP
DEITPQSLVNIRPIVAAIKEFFGSSQLSQFMDQTNPAAGITHKRRLSALGPGGLSRERAG
FEVRDVHTSHYGRMCPIETPEGPNIGLIGSLATYARINPYGFIETPYRRVEKGLVTDIVD
YLTADEEENYTIAQANDLFDPETRKFGTFDDEGNFHEAVRVLCRTKDAAGVFGEPDEVAP
ELVEYMDVSPRQMVSVATSLIPFLEHDDANRALMGSNMQRQAVPLLKPHAPLVGTGIEHR
IAVDSGEILVAQNPGVVDYVDGQTIIVLNNDGEYDEYLVPKFQRSNQSGCINHRPIVRKG
DEVQAGDVLADGPSCDGGELALGQNLMVAYMPWEGYNYEDAIIVSERVVAEDLLTSIHIS
EYEIDARDTKLGPEEITREIPNISDDMISDLDADGIIRVGAEVFPGDVLVGKVTPKGETE
LTAEERLLRAIFGEKAREVRDTSLKVPHGSGGRVIGMSRFSREAGDELAPGVNELVRIYV
AQKRKVQQGDKLSGRHGNKGVISRVLPVEDMPYLADGTPIDVILNPLGVPSRMNVGQLLE
NHLGWAAKWGWDDAEETDAVVEGPMHVATPVFDGATEKEISDAIEKSNRNLINRNHAKFG
DLARDEFVPQLSRTGKTWLYDGRTGEKFREPITVGQSYILKLGHMVDDKIHARSTGPYSL
ITQQPLGGKAQFGGQRFGEMEVWALYAYGASNVLQEILTVKSDDTAGRVKSYEAIVKGEN
IPAAEVPESFKVLVKEMKSLCLNVELEGHDHRTIDVTQESDGQEDGDRALYEAIAADARK
TEEDDAANALDSIAAELGELMGDSNNDTNDLIGEGEER
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaaggaaaaacgactgatcagaccagcctttatagggatcggcgaagcttcgct
aagatcccggacgtcatggacgtccccaacctcatcgccatccaaacggacagctttgag
tttttcaagggcgagggcctggcgcaagcgttccaggatatcagccccatcgagaacaac
accaaggacatgtgcgtggagttcggcaagcacgagttcggcgagccgaagtacacggtg
gacgagtgcaaggagaaggacgtctcctaccaggcaccgctgttcgtggagatccgcttc
atcaaccgcgagaccggcgagatcaaggagcaggacgtcttcatgggcgacttcccgctc
atgacgccgcgcggcacgttcatcatcaacggcacggagcgcgtcgttgtctcccagctc
gttcgctccccgggcgtctacttcgcctccgagcgcgacaaggcgtccgacaaggtgctg
ttcaacgcgaaggtcatcccgagccgcggcgcgtggctcgagttcgagaccgacaagcgc
gacatcctgtccgtgcgcatcgaccgcaagcgcaagcagccggcgacgctgctcgtgcgc
gccctcggcctggccgagacgcgcgaggagatcatcgagctcctcggcaacgacgagatg
gtgctgcgcacgctcgaccgcgatccggccaccacgaaggaagagtcgctcatcgagctg
tacaagcgcttccgtcccggcgagccgcccaccatcgactccgcccgcacgctgctcgag
ggcctgttcttcaacccgcagcgctacgatctggcgaaggtcggccgctacaagatcaac
aagaagctgggcttcgaccccgactacgaggcatccacgctcaccaacgacgacatcgtg
cgcacgatgcagtacatcgtggcgctccatgccggcgacgagggcgtgcagaccgacgac
atcgaccacttcggcaaccgccgcatccgcacggtgggcgagctgatccagaaccagttc
cgcatcggcctgtcgcgcatggagcgcgtcgtgcgcgagcgcatgagcatgcaggagccc
gacgagatcacgccgcagagcctcgtgaacatccgccccatcgtggcggccatcaaggag
ttcttcggctcctcgcagctgtcccagttcatggaccagacgaaccccgctgccggcatc
acgcacaagcgccgtctgtcggccctcggcccgggcggcctgtcccgcgagcgcgccggc
ttcgaggtgcgcgacgtccacacgtcccactacggccgcatgtgccccatcgagacgcct
gaaggcccgaacatcggcctcatcggctcgctggcaacctacgcccgcatcaatccctac
ggcttcatcgagacgccgtatcgccgcgtcgagaagggcctggtcacggatatcgtggac
tacctcacggccgacgaggaggagaactacaccatcgcgcaggccaacgacctgttcgac
cccgagacccgcaagttcggcacgttcgacgacgagggcaacttccacgaggccgtccgc
gtgctctgccgcacgaaggacgccgccggcgtgttcggcgagcccgacgaagtggcgccc
gagctcgtcgagtacatggacgtgtccccgcgccagatggtatcggtggctacctcgctc
atcccgttcctcgagcacgacgacgcgaaccgcgccctcatgggttcgaacatgcagcgt
caggccgtgccgctgctcaagccgcacgcgccgctcgtcggcaccggcatcgagcaccgc
atcgcggtcgactccggcgagatcctcgtcgcccagaacccgggcgtcgtcgattacgtc
gacggccagaccatcatcgtgctgaacaacgacggcgagtacgacgagtacctcgtgccg
aagttccagcgctccaaccagtcgggctgcatcaaccaccgccccatcgtccgcaagggc
gacgaggtgcaggcgggcgacgtgctggccgacggccccagctgcgacggcggcgagctc
gcgctcggccagaacctcatggtggcctacatgccgtgggaaggctacaactacgaggac
gccatcatcgtgtccgagcgcgtggttgccgaggacctgctcacgtccatccacatctcc
gagtacgagatcgacgcccgcgacacgaagctcggccccgaggagatcacccgcgagatc
ccgaacatctccgacgacatgatcagcgacctcgatgccgacggcatcatccgcgtgggc
gccgaggtgttcccgggcgacgtgctggtgggcaaggtcacgccgaagggcgagacggag
ctcacggccgaggagcgcttgctgcgcgccatcttcggcgagaaggcccgcgaggtgcgc
gacacgtccctcaaggtgccccacggctccggcggccgcgtcatcggcatgagccgcttc
agccgcgaagccggcgacgagctggctccgggcgtcaacgagctcgtgcgcatctacgtg
gctcagaagcgcaaggtgcagcagggcgacaagctgtccggccgtcacggcaacaagggc
gtcatctcccgcgtgctgccggtggaggacatgccctacctcgccgacggcaccccgatc
gacgtcatcctcaaccccctgggcgttccgtcccgcatgaacgtcggccagctgcttgag
aaccacctcggctgggctgcgaagtggggctgggacgacgcggaggagaccgacgcggtg
gtcgagggcccgatgcacgtggccacgcccgtgttcgacggcgccacggagaaggagatc
tccgacgccatcgagaagtcgaaccgcaacctcatcaaccgcaaccacgccaagttcggc
gacctggcgcgcgacgagttcgtgccccagctgtcccgcacgggcaagacgtggctgtac
gacggccgcacgggcgagaagttccgcgagcccatcacggtgggccagagctacatcctg
aagctcggccacatggtggacgacaagatccacgcgcgctcgaccggcccctacagcctg
atcacgcagcagccgctcggcggcaaggcgcagttcggcggccagcgcttcggcgagatg
gaagtgtgggcgctctacgcctacggcgcgtcgaacgtgctgcaggagattctcacggtg
aagtccgacgacaccgcgggtcgcgtcaagtcctacgaggccatcgtcaagggcgagaac
atcccggccgccgaggtgcccgagagcttcaaggtgctcgtgaaggaaatgaagtcgctg
tgcctgaacgtcgagctggagggtcacgatcatcgcacgatcgacgtgacgcaggaaagc
gacggccaggaagacggcgatcgtgcgctgtacgaggccatcgccgccgacgcgcgcaaa
actgaagaagacgacgcggccaatgcgctcgacagcattgccgccgagctgggagagctg
atgggcgatagcaacaacgatacgaacgacctgatcggtgagggagaggagcgataa
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integrated database retrieval system
