Echinococcus granulosus (hydatid tapeworm): EGR_00344
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Entry
EGR_00344 CDS
T05553
Name
(RefSeq) Exosome complex exonuclease RRP42
KO
K12589
exosome complex component RRP42
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGR_00344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_00344
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EGR_00344
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
EGR_00344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
36336059
NCBI-ProteinID:
XP_024356271
UniProt:
W6UTW4
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MAVCNQQCFIEVYAAEAVHSGVLPIANIASQIIMDNTLISDAERFFIIQGAQPRKLGCRL
DGRQRSDFRPIEIETGILNHTAGSARVKIGNTIVIACVSIEIGTPSVDAPNEGRLEIDVE
CSPTATPRFSGKSGSDIADTLKATLSTALTRECLPFKLLCIQPGKQCWIIHADVLLLESA
GNLLDATSLAIVAVLSTVKLPLSLARKIATETGDTSGGGDFALSIKNLSMFTTVHKIGNS
YIVDADKEEEACSFARVFVAVRADGTITTIIKEGCGSLRIESVMDMIEIGQWMGKGMHAA
LASALQQERNMKSAS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctgtaatcaacaatgttttattgaagtatacgctgccgaagcggtgcattct
ggagttctaccaatcgctaacattgcttcgcagatcataatggataacacgcttataagc
gatgctgaacgcttttttataattcaaggcgcccagccacgaaagctcggttgtcgatta
gatggaagacagcgaagcgactttcggccaatagaaattgaaacgggtattcttaaccac
acagccggctcagcaagagtcaaaattggaaacaccattgtaattgcatgtgtttcaatc
gaaattggcaccccgtctgttgatgctcctaacgagggccgactagaaattgatgttgaa
tgctctcctacggccacacctaggttttctggtaaaagcggatcagatattgcagataca
ctaaaagccactctctcgactgcacttacaagggagtgtctcccctttaaattgctgtgc
attcaacccggaaaacagtgctggatcatccacgctgatgttcttctccttgaaagtgct
ggaaatcttctggatgcgacttcccttgcaattgtcgccgttctgtcaacagtcaagtta
ccactttctttagctcggaaaattgcaacagaaaccggtgatacttccggtggtggcgat
ttcgcactctcaataaaaaatctttcaatgtttactactgttcataagatcgggaattcg
tatatcgttgacgccgacaaggaagaagaagcctgttcatttgcccgggtttttgtcgcc
gttcgtgctgatgggacgattacaacaatcatcaaggaggggtgtggcagtctgcggatc
gagtcagtaatggacatgattgagattggtcaatggatgggcaagggaatgcatgcagct
ctggcgtcggcactgcagcaggaacgcaacatgaagtctgccagctag
DBGET
integrated database retrieval system
