Aurantiacibacter gangjinensis: BMF35_a0934
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Entry
BMF35_a0934 CDS
T04581
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
egn
Aurantiacibacter gangjinensis
Pathway
egn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMF35_a0934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egn03021
]
BMF35_a0934
03400 DNA repair and recombination proteins [BR:
egn03400
]
BMF35_a0934
Enzymes [BR:
egn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMF35_a0934
Transcription machinery [BR:
egn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMF35_a0934
DNA repair and recombination proteins [BR:
egn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMF35_a0934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Siah-Interact_N
B
Motif
Other DBs
NCBI-ProteinID:
APE27763
UniProt:
A0A0G9MMC4
LinkDB
All DBs
Position
I:937088..941263
Genome browser
AA seq
1391 aa
AA seq
DB search
MASKAKAPEVQGSKKKRIRKIFGDIHEVVQMPNLIEVQRESYEQFLRSDPSIDYVSGLEK
TLRSVFPIRDFAGTAELDFVHYELEEPKYDTTECRQRGITYAAPMKVTLRLIVFEVDQET
ETRSVLDIKEQDVYMGDMPLMTGNGTFIINGTERVIVSQMHRSPGVLFDHDRGKTHSSGK
FLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTSLLYALGLDSEQILDHFYETVT
WKRGKDGWEIPFVAENWRGQKPGFALVDAKTGEEVFPAGQKVSPRAANKAAKDGLKTLLI
PTEEIFGRYASRDMIDEKTGRIYIEAGDEVSPENLEVLDGAGIDQIELLDIDHVTTGAWM
RNTLAADKAENRDEGLEAIYKVMRPGEPPTKETAEALFEGLFFDGERYDLSAVGRVKLNM
RLELDAEDTVTTLRKEDILAVVKELVDLKDGKGEVDDIDNLGNRRVRSVGELLENQYRVG
LLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHK
RRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSTFARVNKYGFI
ETPYRTVKDGKVSQEVNYLSAMEEQKHTVAQASASTDKDGKFTEELVSTRQNGEFTMSPN
ENVTLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVRAEAPWVGTGMEET
VARDSGAAISAKRGGIVDQVDAGRIVIRASGEVDTTNPGVDIYTLQKFQRSNQNTCVNQR
PLVKVGDVVEQGDIIADGPSTDLGELALGKNALVAFMPWNGYNYEDSILISERIVKDDVF
TSIHIDEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVHPGDILCGKIT
PKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTVVEVRVFNRHGIEIDDRTRAI
QNEEIERLKKDSEDERNILNRATYNRLRDMLSGQTASAAPKGVKKGTVIDDEVLDGVEKR
EWFKFAVADDNMQSQLEAVKGQYDEAVKAIKDKFDDRKEKLERGDELAPGVLKMVKVFVA
VKRKLQPGDKMAGRHGNKGVISRILPEEDMPFLEDGTPVDIVLNPLGVPSRMNVGQIFET
HLGFAARGLGQQIGEQLDEWRASNPDATAGKPPAALMDKLKDVYGENYHDDLNSRTGEEV
AELAHNLRRGVPMGTPVFDGAREADVTDMLLKAGYDASGQSDLYDGRTGEVFDRKVTVGV
IYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQE
MLTVKSDDVIGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELTSLNDGEEGE
DGDGFSQIAAE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaaggcgaaagctcccgaagttcagggcagcaagaagaagcgtatccgcaag
attttcggcgacatccacgaagtggtgcagatgccgaacctgatcgaggtgcagcgcgaa
agctacgagcagttcctgcgctccgatcccagcatcgattacgtttccggtctggaaaag
acgctgcgcagcgtcttcccgatccgcgattttgccggcaccgccgaactggatttcgtc
cattacgagctggaagagccgaaatacgacaccaccgaatgccgccagcgcggtatcacc
tatgccgccccgatgaaggtgacgctgcgcctcatcgtgttcgaggtggatcaggaaacc
gaaacccgctccgtgctcgatatcaaggagcaggacgtttacatgggcgacatgcccctg
atgacgggcaacggcaccttcatcatcaacggcacggagcgtgtgatcgtgtcgcagatg
caccggtcgcccggcgtgctgttcgaccatgaccgcggcaagacgcactcttcgggcaaa
ttcctcttcgctgcccgcgtcattccgtatcgtggttcgtggctcgatttcgaattcgac
gccaaggacatcgtcaatgtccgtatcgaccgcaagcgcaagctgccggtcacctcgctg
ctgtatgcgctgggcctcgatagcgagcagatcctcgaccatttctatgagacggtcacc
tggaagcgcgggaaggacggctgggaaatcccgttcgtggccgaaaactggcgtggccag
aagccgggcttcgcgctggtcgatgccaagacgggcgaagaagtgtttccggcaggccag
aaggtctctccgcgcgcagccaacaaggctgccaaggatggcctcaaaaccctgctgatc
ccgaccgaggaaatcttcggccgctatgcctcgcgcgacatgatcgacgagaagaccggc
cgcatctacatcgaagctggcgacgaagtctcgcccgagaacctcgaagtgctcgacggt
gccggcatcgaccagatcgagctgctggacatcgaccatgtcaccaccggtgcatggatg
cgcaacacgctggccgccgacaaggcggagaaccgcgacgagggcctcgaagcgatttac
aaggtcatgcgccccggcgaaccgccaaccaaggaaaccgccgaagcgctgttcgaaggc
ctgttcttcgatggcgagcgctacgacctttccgcagtgggccgcgtgaagctgaacatg
cgccttgagctggacgcagaagacaccgtcaccacgctgcgcaaggaagacatcctcgcc
gtggtgaaggaacttgtcgacctgaaggacggcaagggcgaagtcgacgacatcgacaat
ctcggcaaccgccgcgtgcgttcggtcggcgagctgctggaaaaccagtaccgcgtcggc
ctgctgcgcatggagcgcgcggtgaaggagcgcatgtcgagcgtggatgtgtccaccgtc
atgccgaacgacctgatcaatgcgaagcccgccgtggcagccgtgcgcgagttcttcggc
tccagccagctgtcgcagttcatggaccagaccaacccgctttcggaagtcacccataag
cgccgcgtctccgcgctcggcccaggcggcctgacgcgggagcgtgcgggcttcgaagtg
cgcgacgtgcacccgacgcactatggccgcatctgcccgatcgagacgccggaaggcccg
aatatcggcctgatcaactcgctcagcacctttgcccgcgtgaacaagtatggcttcatt
gagacgccctaccgcacggtgaaggacggcaaggtgtcgcaggaagtgaactacctctcc
gccatggaggagcagaagcacaccgtggcgcaggcgtcggcatccaccgacaaggacggc
aagttcaccgaagagctcgtttcgacccgccagaacggcgaattcacgatgagccccaac
gagaacgtcacgctgatggacgtttcgcccaagcagcttgtctcggtcgccgcatcgctg
atcccgttcctggaaaacgatgacgccaaccgcgccctgatgggatcgaacatgcagcgc
caggccgtgccgctggtacgcgccgaagcgccgtgggtcggcaccggcatggaagagacg
gtcgcccgcgattccggcgccgccatctcggccaagcgcggcggtatcgtcgaccaggtc
gatgcaggccgtatcgtgatccgtgcctcgggcgaagtcgatacgacgaacccgggcgtg
gacatctatacgctgcagaaattccagcgctccaaccagaacacctgcgtcaaccagcgt
ccgctggtgaaagtgggcgacgtggtggaacagggcgacatcatcgccgatggtccctcc
accgatctgggcgagctggcactgggcaagaacgcgctcgtcgccttcatgccatggaat
ggctacaactatgaggactccatcctgatctccgagcgcatcgtgaaggatgacgttttc
acgtcgatccatatcgacgagttcgaggttatggcccgcgacaccaagctgggcccggaa
gacatcacccgcgacattcccaatgtcggcgaggaagcgctgcgcaacctcgacgaggcg
ggcatcgtctatattggtgccgaagtgcatccgggcgatatcctgtgcggcaagatcacg
cccaagggtgaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgaa
aaggccagcgatgtgcgcgacacctcgctccgcctgccgccgggcgttgccggtactgtt
gtcgaagtccgtgttttcaaccgtcacggtatcgagatcgacgaccgtacgcgcgccatc
cagaacgaggaaatcgaacgcctcaagaaggatagcgaggacgagcgcaacatcctcaac
cgcgccacttacaaccgcctgcgcgacatgctcagcggccagacggcttcggcagcgccc
aagggcgtgaagaaaggcaccgtcatcgatgacgaggttctggacggtgtcgagaagcgc
gaatggttcaagtttgccgtcgccgacgacaacatgcagagccagctggaagccgttaag
ggccagtatgacgaggccgtgaaggccatcaaggacaagttcgacgaccgcaaggagaag
ctcgaacgcggtgacgaactggcaccgggcgtcctcaagatggtcaaggtgttcgtcgcg
gtgaagcgcaagctgcagccgggcgacaagatggccggccgccacggcaacaagggtgtg
atctcgcgcatcctgccggaagaagacatgccgttcctggaggacggcacgccggtcgac
atcgtgctgaacccgctgggcgtgccttcgcgcatgaatgtgggccagattttcgaaacg
cacctgggctttgccgctcgcggccttggccagcaaatcggcgagcagctggacgaatgg
cgcgcatcgaaccccgatgccaccgccggaaagccgcctgccgcgctgatggacaagctg
aaggatgtttatggtgagaactaccatgacgacctgaacagccgcacgggtgaggaagtg
gccgagctggcgcacaatcttcgccgcggtgttccgatgggcacgccggtcttcgatggc
gcgcgcgaggcggatgtcaccgacatgctgctaaaggcgggctacgatgcgtcgggccag
tcggacctgtatgacggccgcacgggtgaggtattcgaccgcaaggtgacggtgggcgtg
atttacatgctcaagctgcaccacctggtggatgacaagatccacgcccgctcgatcggc
ccctactcgctcgtcacccagcagccgctgggcggtaaggcgcagttcggcggccagcgc
ttcggtgagatggaagtctgggccctgcaggcctacggcgcggcctataccttgcaggaa
atgctgacggtgaagtcggatgatgtgatcggccgcaccaaggtgtacgaagccatcgtc
aagggcgacgataccttcgaggccggcattccggagagcttcaacgtgctcgtcaaggaa
atgcgctcgctgggcctgaatgtcgaactcacttcgctgaatgacggcgaagagggcgaa
gacggcgacggcttctcgcagatcgcggctgaataa
DBGET
integrated database retrieval system
