Eucalyptus grandis (rose gum): 104416909
Help
Entry
104416909 CDS
T03547
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104416909
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egr01009
]
104416909
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104416909
03019 Messenger RNA biogenesis [BR:
egr03019
]
104416909
03041 Spliceosome [BR:
egr03041
]
104416909
Enzymes [BR:
egr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104416909
Protein phosphatases and associated proteins [BR:
egr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
104416909
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104416909
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104416909
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104416909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
104416909
NCBI-ProteinID:
XP_010026545
LinkDB
All DBs
Position
8:30462893..30466279
Genome browser
AA seq
394 aa
AA seq
DB search
MEKQGLGCGLEMAALDDIINRLLDFRSRSAQEQFLLTEAEISQLCLASRDVFLEQSNLLE
LEGHLKILGDIHGQYSDLLRFFELGGFPPHANYVFLGNYVDHGKQSLETICLLLAYKIKF
PENFFLLRGNHECASMNRIYGFYDECKRRMTVTVWKKFIDCFNCLPVAAVIESNILCMHG
GLSPKLKNLNQIRGLQRPSEVPYRGLLHDLLWSDPDKDVKGWGMKDQGTSYTFGPDRLSK
FLKKHDLDLLCRGHQVVEDGYEFFADGELVTIFSAPNFCSERDNVGAMMNVDENLVCSFQ
VLKPADRAANSSDNDGTIAVTSPPKLQSYPRENWLGKIRSVRLLGLDWPVAHPYIIVKGS
AVFHKTNFRKAHAELSGASFVRRDFKATSILVRL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacaaggtctagggtgtggactggagatggcggcgttggatgatatcattaac
aggttgttggatttcaggagcagaagcgcgcaggagcagttcctgctcaccgaggctgag
atcagccagctctgccttgcctctcgcgacgtcttccttgaacagtccaatctccttgag
ctcgaaggccacctcaagatcttaggtgacattcatgggcagtattctgatcttctgagg
ttttttgaacttggaggtttccctcctcatgccaattatgtatttcttggaaattacgtg
gatcatggcaagcaaagtctggagacaatctgccttctgctggcctacaaaattaagttc
cctgagaatttcttccttttacgtggaaatcatgagtgtgcatccatgaatcggatatat
ggattttatgatgaatgtaaacgccgcatgacagttactgtttggaagaagttcattgat
tgtttcaactgtcttccagtggccgctgtcatagagagcaacatactatgcatgcatggt
ggcctttcccccaagttaaaaaatttgaatcaaattagaggcttgcagcgcccaagtgaa
gttccatatcgtggtctcctccacgatttgctttggtcagatcctgataaggatgtcaaa
ggctggggaatgaaagatcaaggcacttcatatacctttggcccagatagattgtctaaa
ttcttgaaaaagcatgatctggaccttctttgtcgtggccaccaggttgttgaagatggg
tatgaattctttgccgatggagaactggtgactatattttctgctcctaatttttgcagt
gaacgtgacaacgttggtgcaatgatgaatgtagatgaaaacttagtgtgctcatttcaa
gttcttaaacctgctgatagagcagctaattcatcggacaatgatggaacgattgctgtc
acatcacctccaaaattgcaatcctatcctcgtgagaactggcttggtaagatcaggtca
gttcggctcctggggttggactggccggttgcacacccgtacataatagtaaagggatcg
gctgtttttcacaagacaaacttcagaaaagcccatgctgaattgtcaggagcatcattt
gtgcgaagagatttcaaagctactagtatcctggtgaggttatag
DBGET
integrated database retrieval system
