Eucalyptus grandis (rose gum): 104427474
Help
Entry
104427474 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104427474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104427474
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104427474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_8
TPR_1
Motif
Other DBs
NCBI-GeneID:
104427474
NCBI-ProteinID:
XP_039161431
LinkDB
All DBs
Position
11:21816847..21826132
Genome browser
AA seq
863 aa
AA seq
DB search
MANEGEMGNWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTLRTEAPSQS
IAATRLLAREGXNAEQLARDLKSFELKTTFEDVFPAEATTVEDYLQQVHEIAMVSAIQEA
QKDNVRSFNDYMLKVLEDDWQKEKRDFLQSLSRISLLPKTNIVDSGYGGARLPQIASTVS
SPQVSSGPSGMEIVAVANKSILEKKASVYGGVVKDLNSAREHGLPFKPATAFKGAYESLG
INTSGGKSVSMQKIWHLIQALMDEDSVVRWNVSKKMSLVIGARRHLEWGHEKYIMDMIQS
HPAQAALGGGVGNLQRIHAFLRIRLRDYGVLDFDVGDARRQPPVDTTWQQIYFCLRTGYY
NEARDVALSSRSAHQFAPLLTEWINTXGMVSAETAATASEECEKLLRMGDRVGRAAYDKK
RLLLYAMISGSRRLVERLLRDLSALFTTIEDFLWFKLSAIREFPLGGSSAILSESSVPYS
LEDLQAYLNKFAASYYTKNGKDPLVYPYILLLSVQFLPAILYLSKEAGDEGYNIDATHIA
IVLADHGVLTEGTGAGSKFGVMDAYAEASSMIQQYGSSYLHLGDLSMALEYYAQAAAAVG
GGRLSWTGRANADQQRQRSLMLKQLLMELLLRDGGIYFLLGSRGSGEEGELTRFIPDVKT
RQQFLLEAARQCLEAGIYDKSIEILKRIGAFSMALDTINKCLSDSICALSRGRLDSESQT
AGLVHSGNEILETYKYSPEISPQERESVMEQQTVLRQLEAILSIYKLARAGHYLDALREV
AKLPFLPLDPRTPDVTADVLQNLSPYVQACVPDILKVALSCMDNVPDSDGSLRALKAKIA
NFLANNLKRNWPRDLYEKVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaaggagagatgggcaactggaccgatctgctccattcctccaccaagctc
ctcgagcaagccgctccttccgctcagttccctcctctccagaggaaccttgatcagttg
gaagcattatccaagaagctcaagtcaaagactctaaggactgaagctccatctcaatct
attgcagccaccaggcttcttgcacgtgaaggantaaatgccgaacagcttgcacgagat
ctgaagtcctttgagctgaagactacattcgaggacgtgttccctgctgaggcgacgact
gttgaggattatttgcagcaggttcatgaaatagcaatggtctcagctattcaggaagca
cagaaggacaatgttagaagttttaatgattatatgctgaaagtattggaggatgattgg
caaaaggaaaagcgtgactttcttcagagcttaagccggatatcattattacccaagact
aacattgttgattcaggctatggaggtgctcgtctcccccaaatagcctcaacagtttca
agtcctcaagtttcatctggtccttcaggcatggagattgtagctgtagcaaacaagtcg
attcttgagaaaaaagcttctgtctacggtggtgttgtgaaggaccttaacagtgccaga
gagcatggcttgccatttaaacctgctactgctttcaagggtgcttatgaaagtttgggt
attaatacgtctgggggaaaatcagtcagtatgcagaaaatatggcatctcattcaggcg
cttatggatgaggattcagttgttcggtggaatgtttcaaagaagatgtcattggtaatt
ggtgcaaggcggcaccttgagtgggggcatgagaagtacattatggacatgatacaaagt
catcctgcacaagctgctcttggtggtggtgttgggaatttgcaaaggattcatgccttc
cttcggattcgtttgcgtgattatggtgttctcgacttcgatgttggtgatgctcgaagg
cagccacctgttgacaccacgtggcagcagatatacttttgcctgagaactgggtattac
aatgaagcaagggatgttgccttgtcatcccgtagtgcacatcagtttgcacctctgctc
acagaatggataaatactngaggtatggtttctgctgagacagctgcaactgcttcagaa
gaatgtgaaaagttgttaagaatgggtgatcgggtgggtcgagctgcatatgataagaaa
aggttgttactatatgccatgatatctggttctcgaaggcttgttgaaaggctgctgaga
gatctatcggcacttttcaccaccatagaggatttcttgtggtttaaattgtcagccatc
agggagttccctctcggaggttcatctgctattctaagtgagagttcagtcccctatagt
ttagaggatttgcaggcttacctaaataagtttgcagcatcatactataccaaaaatggg
aaggaccctcttgtatacccatatattctgctcctaagtgtccagttcctcccagctatc
ctttatttgtctaaagaagcaggcgatgaagggtacaacattgatgccactcacatagct
atcgtgcttgctgaccatggtgtccttacggaaggtacaggggcaggatcaaagtttggt
gtaatggatgcttatgcagaagcatctagcatgattcaacagtatggatcttcatattta
catcttggagatctttcaatggcattggaatattatgcacaggctgctgctgcagtgggt
ggtggacgactatcttggactggaagggcaaatgcggatcagcagagacagagaagtttg
atgctgaaacaactcctcatggagctgttattgcgagatggtgggatttactttttactt
ggttcaagaggttcaggggaagaaggtgaattgacaaggtttataccggatgtaaaaaca
agacaacaatttctgcttgaagctgctcggcagtgcttggaagctgggatatatgacaaa
tcaatagagattctgaagagaattggggcgttctcaatggccctggacaccattaataaa
tgcctttcggactcgatatgtgctctttcccgtggacggttggatagtgagagccagaca
gctggcttggttcattctggaaatgagattttggagacctacaaatatagtcctgaaatc
agtcctcaggagagagagagtgttatggagcaacaaacagtgttaagacagcttgaggcg
atattgtcgatatacaaattggcaagagcaggtcattatctggatgctttgagggaggtt
gccaaacttccgttccttccattggatccacgaacaccagatgttacggcagatgtcttg
cagaacttatctccatatgtccaagcctgtgttcctgacatcctaaaggttgctcttagt
tgtatggataatgtgcctgattccgatggatcactccgtgctctaaaagccaagattgcg
aattttcttgcaaacaatttgaagaggaattggccacgtgatctttatgagaaggttgcc
cgaagcttgtga
DBGET
integrated database retrieval system
