Eucalyptus grandis (rose gum): 104437348
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Entry
104437348 CDS
T03547
Name
(RefSeq) probable pectate lyase 5 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104437348
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104437348
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104437348
NCBI-ProteinID:
XP_039164387
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Position
3:36703562..36707302
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AA seq
537 aa
AA seq
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MLRITWSCIVLVCCSFTLHALNLNATSSSSSSSKILVHPHQHPDPQAVVHDVNRRVNESV
TRRQLLVVQVRDQCLTGNPIDDCWRCDPNWELNREHLADCAIGFGREALGGRGGNVYVVT
DPSDPDPENPPPGTLRYGVVQAGPLWIIFSGNMVIKLRYELLISSFKTIDGRGANVHITG
LGCLIIYDVTNIIIHNVHIHHCKPSGNAKIRISPTQVTERGRSDGDGISVLASSKIWIDH
CFLSYCTDGLIDVTEGSTAVTLSNNMFAHHDKVMLLGHSDDFTADSGMQVTVAFNHFGDD
LKERMPRCRFGYFHVVNNDYTQWGMYAVGGSSHPTINSQGNRYLAPQDNNNKEVTKRMDT
DESEWRKWNWRSEGDLMVNGAFFVTSGADMSPQYAEASSMSPLSASYIDQLTATAGVLVE
QSRSDAGTVTNPSSGGGIVTNPAAPGSSGGGVVTNPAAPGSSGGTVTNPVSSGGDGSSGY
PGQGSTGTITGTSCWYTDNGIDYGSIYNSEARTPLVPMTSVILSVIAIVAFLHRTCS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcattacttggtcctgcattgtccttgtatgctgttcgttcactctccatgca
ctcaatctcaatgcaacttcttcttcctcttcttcttctaaaatcttggtccacccacat
cagcatcctgatccacaagctgtagttcatgacgtgaacaggagggtgaacgaatccgtc
actagaaggcagctgcttgtggtccaagtaagggaccagtgcttgacgggcaatccaata
gatgactgctggcggtgcgacccgaactgggaattgaaccgcgagcacctagccgactgc
gcgattgggttcggccgtgaggccctgggagggcggggcggcaacgtctacgttgtgaca
gacccatctgatccggacccagagaacccgccccctggcacgctccgctacggtgttgtg
caagccggacccctctggatcatcttctctggaaatatggtaatcaaactcaggtatgag
cttcttatcagcagtttcaagaccattgatggccgaggagccaacgtgcatataacaggt
ctcggttgtttgatcatttatgacgtcaccaacatcatcatccacaatgtgcacattcac
cattgcaagccttctgggaatgccaagatccggatcagcccgacgcaagttaccgagagg
ggaagatcagatggcgatgggatatccgtcttagcatcatcaaaaatttggattgaccat
tgtttcctgtcgtattgcacagacggtctgatcgatgtcactgaaggatctacagcagtc
acattatccaacaacatgttcgcccaccatgataaggtgatgctgttgggtcacagtgat
gatttcacggctgactcagggatgcaagtgaccgtcgcattcaaccactttggcgacgac
ctaaaggagaggatgccacggtgccggttcgggtactttcatgtagtgaacaatgactac
actcagtgggggatgtatgctgttggagggagctcccatcctaccattaatagtcagggg
aatcggtatctcgcgccgcaggataataacaacaaggaggtgacaaagcgaatggacaca
gatgagagcgagtggaggaaatggaattggagatcggaaggtgatctgatggtgaatggt
gccttctttgtgacctctggtgcagacatgagcccccagtatgctgaagcctctagtatg
tcgcccctgtcggcaagctacattgatcagctcactgcgactgctggtgtcttagttgaa
cagagcaggagtgacgccgggactgtgaccaatccctcaagcggcggtgggattgtgacg
aatcctgctgctcccgggtcaagcggtggtggggttgtgacgaatcctgctgctcccggg
tcaagcggtgggactgtgacgaatcccgtgtcaagtggcggagatggaagctctggctac
ccaggacagggatcaactggaacgataactggaactagctgttggtatactgacaacggc
atcgactatggctccatatataatagcgaggccaggacgccccttgtcccaatgacctcg
gtcatcttatctgtcatagccattgtagcattcttacatcgaacttgctcctaa
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