Eucalyptus grandis (rose gum): 104454145
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Entry
104454145 CDS
T03547
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104454145
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104454145
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104454145
NCBI-ProteinID:
XP_010067210
UniProt:
A0A059BGQ2
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Position
7:complement(52528684..52535456)
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AA seq
492 aa
AA seq
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MLFPTTCILPACIVLVSLTLSAALNLTLPHQHPDPEAVVQDVHRRLNASLSRRLLSSSSS
SCGTGNPIDDCWRCDPNWASNRQRLADCGIGFGQSALGGRDGRIYVVTDSSDSDVVDPKP
GTLRYGVLQEEPLWIIFSADMMIRLKHELIINNFKTIDGRGHNIEITGNGCLTVQDVSNI
IIHNIHVHDCKPSGNTNIRSSPTHVGFRGVSDGDGISIFGASHIWVDHCSLWHCKDGLID
AIMGSTAITISNSYFAHHNEVMLLGHKDSNAPDSGMQVTIAFNHFGEGLVQRMPRCRRGY
IHVVNNDFTEWQMYAIGGSANPTINSQGNRYTAPVDADAKEVTKRVDTEETEWTDWNWRT
EGDIMVNGAYFVPSGVGLSAQYSKASSLEPKSAGLIDQLTLNAGVFGDPRDTSGISNPGF
SGAGTTTATTADGGGGNGSNGGDSDYFGMIFGSDAPPAHSSATSILLSLLIILVLDTITN
RGALLSLQLLTL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcccgaccacctgcattctccctgcgtgcatcgtcttggtctctctcacactc
tcggctgctctgaatctcaccctccctcaccaacacccggaccctgaagcggtagtacaa
gatgtgcacaggagattgaatgcctccctctcaagaagactcctatcctcgtcctcctcc
tcgtgtggcaccggcaaccccatcgacgactgctggcggtgtgacccgaactgggcctcg
aaccggcagcgcctggcggactgcggcatcgggttcgggcagtcggcgctggggggtcgt
gacgggcgcatctacgtggtgaccgactcctcggactcggacgtggtggacccgaagccg
gggacgctccggtacggggtcctccaggaggagcccctgtggatcatcttctccgccgac
atgatgatccggcttaagcacgagctcatcatcaacaacttcaagaccatcgacggccgg
gggcacaacatcgaaatcaccggcaacggctgcctcaccgtccaagacgtctccaacatc
atcatccacaacatccacgtccacgactgcaagccctccggcaacaccaacatccggtcg
tcgccgacccacgtcgggttccgcggggtgtccgacggggacgggatatcgatattcggg
gcgtcgcacatatgggtggaccactgctccctgtggcactgcaaagacgggctgatcgac
gccatcatgggctcgacggcgatcaccatatcaaacagctacttcgcgcaccacaacgag
gtgatgctgctaggccacaaggactcgaacgccccggactccgggatgcaggtgaccatc
gcgttcaaccacttcggggaggggctggtgcagcggatgccgcggtgccggcgaggctac
atccacgtggtcaacaacgacttcacggagtggcagatgtacgccatcggcggcagcgcc
aaccccaccatcaacagccagggcaaccgctacacggcgcccgtcgacgccgacgccaag
gaggtgacgaagcgcgtggacacggaggagaccgagtggacggactggaactggcggacg
gagggggacatcatggtgaacggcgcctacttcgtgccgtccggggtcggcctcagcgcc
cagtactccaaggcctccagcctcgagcccaagtcggccggcctcatcgaccaattgacc
ttgaatgccggcgtcttcggcgatcctagggacactagcggcatatctaatccggggttt
tctggggccgggaccaccacagccaccaccgcagacggcggcggaggcaatgggtccaat
ggaggagacagtgactactttggaatgatatttgggagcgacgcaccaccagcacattca
tcagccacctccatccttttgtctttactaatcattttggttttggacactatcaccaac
cgtggtgctctattatcattgcaattattgacattgtag
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