Erythranthe guttata (spotted monkey flower): 105963668
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Entry
105963668 CDS
T07346
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105963668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105963668
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105963668
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105963668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Amidohydro_3
Motif
Other DBs
NCBI-GeneID:
105963668
NCBI-ProteinID:
XP_012843553
LinkDB
All DBs
Position
Unknown
AA seq
2439 aa
AA seq
DB search
MTEKEKDGSQSGSPMIPFSSKISSQIRFLLQSVNDSNYDSVFQELCKYTMHGVEGSMLLL
RTCLDHANSFGKDLKTTKLHPLYASIFKHILDKPNFSTLLTESLRTVAINEDFLQNLSGA
LHLSVSEKIGIGLALSDSENHDVRMCGKNFCMGQIAELCANPVALKSTELIQHILMFLSQ
SEGLFKHVDSFMQMLSLVQLKDGSQFILAPILPDEIREDNFFRQLDLFHEGGEDDFDAIL
AEMEKEISMADVMSELGYGCTVNVSQCKEMLSLFLPLSDASTAKILGTIARTYAGLDDSQ
NVFATFRSALGISNGVELPSLNGWNVDVLVESIKQLAPGINWINVMEKLDHEGFYIPNEA
AFSFFMSVYRHACKDPFPLHAICGFVWKNIEGQLSFLKYAVSVPPEIFTFAHSDKQLSYD
DVVTGHAFQPLQVNHAWFCHDLLEVLCQLSERGHASLVRCILEKPINQCPEVLLLGMAHV
KTAYNLIQNEVASAVLPMTLKKASGNSLIFSLWHVNPSMLLRGLVDAMNLDPDNIARILE
ACQELKILSPVLDTIPFYFGIRLAVLASKNEILDLENWLSTHLVTNKDAFCEECLKFLKD
VRVGSENVSANGFHPTGALLSTYLEACPTVSKVLQSHAGVVSSSPLSEEMEKIDVSHMHA
NSRIRNGGGSESTPDSYADDIETEANSYFHQMFSGQLAIDSMIEMLNRFKESSEKREQSI
FECMIANLFEEYKFFSKYPERQLMIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPAE
SKMFSFGTKALEQFMDRLIEWPQYCNHILQISHMRGTHSELIAFIEVTLNRISGTHAEPD
VFHSVTSDHHQGLIQSTATNVEIAGSSFPLIGPGSSQAGLQVSSPIQLSQRPMSSLDERK
TSVTVSNYLKPAHSTSGQPAMGPSSDTGSIQKSHSGVGVPSIHSASPGFPRSSRASSARF
GSALNIETLVAAAERRETPIEAPASEIQDKISFIINNLSAANVEAKAKEFTEFLSEQYYP
WFAQYMVMKRASIETNFHDLYLKFLDKVNLKPLNKEIVQATYENCKVLLGSELIKSSVEE
RSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIIEAYNKGLMIAVIPFTSKILEPCSNSL
VYQPPNPWTMGILGLLAEIYAMPNLKMNLKFEIEVLFKNLLVELKEVKPTSLLKDRVREV
EGNPDFSTKDVVSSQPPTINEVKPGIMSTLNQLEAPLDVAAPSHLGGHSRITSQYGTPLH
HSSGTLTEDDKLVSLGFSDQLPSAQSLLQGQTQFPVNQLPVPASNIEQQVVVNPKLQAFG
LYLHFQSVLPIAMERAVKEVVPSIVQRSVSIATQTTKEIVLKDYAMESDETIIRNCGHLM
VARLAGSLAHVTCKEPLRAAITVQLRNSLQGLSMTSEYLEQAVQIATNDNLDLGCVLIEQ
AATEKGIQIIDGEVAQQLSTRRKHRESVGSAFFDANLHALGQAGVMMPEALRPKPGHLTH
LQQRVYEDFARFPGQNRSVPSSTTVPVGPSASSGTGGLSRQFASASASGQISTNTYSSGL
VNTGLGAVPQTLEISSDEIDSVGAQNPTRSPSLSSTHTAIGDGPESLESDNVASFPPAST
PDLQLTEPSSSIKESGTVAQSINTALASERATSNVLDPSITTGDALDKYQTISEKLENLL
ASDAKEAEIQGVIAEVPAVILRCISRDEAALAVAQKAFRGLYENASNNAHVDAHLAILAA
IRDVSKLVVKELTSWVIYSEEDRKFHKDITVGLICSELLNLAEYNVHMAKLLDAGRNKAA
TEFAISLIQTLVMNDSKVISELHNLVDALAKLAARPGSPESLQQLVEFAKNPGSVAVPSP
VGVGKEDNTRISRDKKFVQEQTIGLSGTREDYSSTELVDSDPAGFPGQVSSLFSDWFKIC
EFPGNNDVACARYVQHLHQRGMLKGDEISDRFFRRIMELAVSHCLSTEVINSSSSQPHQG
QSLSFLAIDSYAKLVFSILKFCPSDQGSNKLSLLPKVLNVTVRVIQKDAEEKRASFNPRP
YFRLFINWMLDLCSLDPVFDGANYQVLTALASSFHHLQPLKVAGFSFAWLELISHRSFMP
KLLTTNAQKGWPYFQRLLVDLFQFMEPFLRNAELAEPVHILYKGTLRVLLVLLHDFPEFL
CDYHFSFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDA
TLKARQMKNDTDEYLKSKQQGSTFLTELKQKLMLSPADAARAGTRYNVPLINSLVLYIGM
QAIQQARSPSHSQSMASMSSFLVSAALDIFQSLIMDLDTEGRYLFLNAVANQLRYPNNHT
HYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHPWGLLITFIELIKYPRYNFWSKT
FTRCAPEIEKLFESVSRSCGGPKPVDESVVSGGMPDNMH
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaagaaaaagacggatcacaatctggttcaccgatgattccgttttcatcc
aaaatttccagtcagatacgatttttgcttcaaagcgtgaacgattccaactacgattca
gttttccaagaactatgcaagtacacaatgcatggagttgagggaagcatgttactgctc
agaacctgtttggatcatgccaattcttttggaaaggatttgaagactacgaagctgcat
cccttatatgcttcaatattcaaacatatcttggataaacctaattttagtacactgtta
actgagtcactgaggactgtcgcgataaatgaagattttctgcagaatttgtctggtgca
ttacacttgtcagtgtctgagaaaattggaatcggtcttgctttgtctgattcagaaaac
catgatgttagaatgtgtggaaagaatttctgcatgggtcagatagcagagttgtgtgcc
aatcctgtggcattgaagtccactgagctaattcagcatattctcatgtttcttagtcaa
tctgagggcctcttcaagcatgtagattccttcatgcaaatgttatctctagtgcagttg
aaggatggctcccaatttatcttagcacctattcttcctgatgaaatacgcgaagacaac
tttttcaggcaattagatttattccatgagggtggtgaagatgattttgatgccattctg
gcagagatggagaaagagattagcatggctgacgtgatgagtgaattaggttatggttgc
actgtcaatgtctctcaatgcaaggaaatgctgtctcttttcttaccgctttctgatgcc
tcaactgcaaagatacttggtacaattgccagaacttatgcgggtcttgatgacagccaa
aatgtgtttgctacattccgctctgctcttggtatcagtaatggtgttgagctaccatct
ttgaacggttggaatgttgatgtccttgtggaatcaatcaagcagcttgctccgggaatt
aactggataaatgtcatggagaagctggatcacgagggcttttatatccccaatgaggca
gcattttccttctttatgtctgtttatagacatgcatgcaaggatccatttcctcttcat
gctatttgtggctttgtttggaagaatatcgagggtcaactctcgtttctgaagtatgca
gtctccgtgccacctgaaatatttacatttgctcattctgataagcaactgtcctatgac
gatgttgttactggacatgcatttcaacctttgcaagtaaatcatgcctggttttgtcat
gacctactggaggtgctgtgtcaactatctgagaggggtcatgcaagtcttgtgcgatgt
atccttgaaaaacctattaaccaatgccctgaagtattgcttcttggcatggctcatgtg
aagactgcgtataatctcatccaaaatgaagtggcttctgctgttcttcccatgacgcta
aaaaaggcttctgggaacagtttaatatttagtctgtggcatgttaacccaagcatgttg
ttacgaggacttgtagatgcgatgaaccttgatccagacaacattgctaggattttggaa
gcttgtcaggaattaaagattttatctccagtactggatacgatccctttctactttggc
attcgcttagctgtacttgcttctaagaatgaaatcctggacctagagaattggttgagt
actcatttagtgacaaataaagatgctttctgtgaggaatgccttaagtttctgaaggat
gttcgtgttggatctgagaatgtttctgctaatggctttcaccccactggtgctcttttg
agtacttatttggaagcttgtcccactgtttcgaaggtccttcagtctcatgctggcgtg
gtttcttccagtcccttgtctgaagaaatggaaaaaatagatgtttctcatatgcatgcc
aattcaaggattagaaacggcggtggttctgagtcaactcctgatagttatgctgacgac
attgagacagaagcaaactcatatttccatcaaatgttttctggtcagctggcaattgat
tctatgatagagatgcttaaccgcttcaaagaatcttccgaaaagagggaacaatcgatt
ttcgagtgcatgattgctaatctatttgaggaatacaagtttttctccaagtaccctgaa
aggcagctcatgattgccgcagttctgtttggatcactcatcaagcatcaacttgtgact
catctcacacttggtattgctttacgagctgttttagacgctttgaggaaacctgctgaa
tcaaaaatgttctcctttgggactaaggcattggagcagtttatggaccgcctcatagag
tggccgcagtactgcaatcatatattacaaatatctcatatgcgtggtacacattcggaa
ctcattgcatttattgaggtgacgcttaacaggatttcagggactcatgctgagccagat
gtgttccatagtgtcacgtctgatcaccatcagggtctcatccaatctactgctacgaat
gtggagattgcgggctcgtcatttcctctgattggacctggtagctcgcaggctgggctg
caagtctcatctcctattcaactttctcaaagaccaatgagttctctagatgagaggaaa
acttctgtaaccgtgtctaattacttaaagccagcgcattccacttctggacagcctgct
atgggtccttcaagtgatacgggaagcattcagaagtcacacagtggagttggtgttcca
tcaatacactctgcctctcctggttttccccgttcgtctcgagcttcatcagcaaggttt
ggctctgctttaaacattgaaacacttgttgctgcagctgaaagaagagaaactcccata
gaggctcctgcatcagaaatccaggataagatttcttttattattaataacttgtccgct
gcaaatgttgaggctaaagctaaagaatttactgaatttctgagtgagcaatattacccc
tggtttgctcagtatatggttatgaaaagggctagcatcgagacaaattttcatgattta
tatttgaagttccttgataaagtaaatttgaagcctttgaacaaagaaattgttcaagcc
acatatgagaactgcaaggttctcttggggtcggaacttataaagtccagcgtggaagaa
agatctttgctaaaaaatctaggaagctggctggggaagattacaattggcagaaatcaa
gttttaagggcacgggagatagatcccaagtctctgattatagaggcatataataaggga
ctcatgatagctgttattccttttacctctaagattctggaaccatgttccaacagtctt
gtatatcaacctcctaacccatggaccatgggtattcttggattgcttgctgagatttat
gcaatgccaaatttgaaaatgaacctgaaatttgagattgaggtcctgttcaagaacctt
cttgttgagcttaaggaagtaaaaccaacttctcttctgaaggatagggtccgagaagtt
gaaggtaatcctgatttctcgactaaagatgttgtatcttcgcagccaccaacaataaat
gaggtcaagcctggaataatgtccacactaaaccaattagaggcaccccttgatgttgct
gctccctcccatcttggtggccattcacgaataacgtcacagtatggcacgcctcttcat
cattcatctggaacgttgacagaggatgataagttggtgagcttgggattttctgaccag
cttccatcggctcaaagtcttctacaaggacagacacaatttccagttaatcagcttcct
gtgccagcatctaatattgaacaacaagttgttgttaatccaaagcttcaggcttttggg
ctatacttgcatttccagagtgtgcttccaattgctatggaaagagctgttaaagaggta
gtgcccagtattgtgcaacggagtgtttctattgcaactcagacaactaaggaaattgtt
ctgaaggattatgccatggaatcagatgagaccattattcgtaattgtggacatttgatg
gttgcgaggctggccgggagtctagctcatgttacctgcaaggaacctttgcgtgctgca
ataacggttcagcttaggaactcacttcagggcttaagcatgacaagtgaatatcttgaa
caagcagttcaaattgcgactaatgacaatctggatcttggctgtgtcttgattgaacaa
gctgcaactgagaagggaattcaaatcattgatggagaagttgcacagcaactctctacc
aggagaaaacatagagagagtgttggttctgcattttttgatgccaacttgcatgcactt
ggtcaagcaggtgtgatgatgccagaggcccttcgtcccaaacctgggcacctgacacat
ttacagcagcgagtttatgaggattttgcccggtttcctgggcagaatcgctctgttcct
agctcaaccactgtgcccgtcggcccttctgcttcttctggcactggtggattgtcacgg
caatttgcatctgcatctgcatctggccaaataagcacaaacacttactcatctggcctt
gtaaatactggactcggtgctgttccgcagacgctggaaattagttctgacgagatagat
tctgttggagcccagaatcctaccaggtctcctagtctttcatcaacccacactgcgatt
ggtgatggtccagaaagtcttgaaagtgataatgttgcttcatttcctcctgcttcgact
cctgatctgcaactaacggaaccttctagttctatcaaagaatctggaactgttgcacag
tctattaatacagctttggcttctgagcgtgctacaagtaatgtattggacccttcaata
accacaggcgatgcactggataaataccagactatttcagagaagcttgaaaatctgttg
gctagtgatgctaaggaggctgaaattcagggagttattgctgaggttcctgcagtcatc
ctcaggtgcattagccgagatgaggctgccttggctgtggctcagaaggcatttaggggt
ttatatgaaaatgcatcaaacaatgctcatgttgatgctcaccttgcaatcctggctgcc
attcgtgatgtcagcaagcttgtagttaaggagctcaccagttgggtgatatactctgaa
gaggataggaagttccataaagatattactgttggtcttatctgcagtgaactattaaac
cttgctgaatataatgttcatatggcgaaacttcttgatgcaggaagaaataaggctgca
acagaatttgccatttctcttatccaaaccctggttatgaatgactctaaagttatttca
gaactacacaatcttgtcgatgctctggcaaagctcgctgcaagacctggatctcctgaa
tcattacaacagctagttgaatttgctaagaaccctggcagtgttgccgtaccatctcct
gtgggtgttgggaaggaggacaatacaagaatctctagggacaaaaagtttgtgcaggaa
cagactattgggctttctggaactagggaggactatagtagcacagaattggtggattca
gaccctgctggttttcctggacaggtgtcttcgttgtttagtgactggttcaaaatatgt
gaatttcctggaaataatgacgtggcttgtgctcgttatgttcaacacttacaccagaga
ggcatgcttaaaggagatgaaatctcggaccggttcttccgcaggatcatggaacttgct
gtgtcacactgtttatctaccgaggtcatcaattctagctcttcccagccacatcaaggg
cagtcactttcgtttcttgctattgatagctatgcaaagctagttttctctattctgaag
ttttgcccttcagatcaggggtccaataaactctctcttctgcccaaggttctgaatgta
actgtgagagttattcaaaaagatgctgaggagaagagggcatcctttaatcccaggcca
tattttaggctgttcattaattggatgcttgatttatgttccttggatccagtatttgat
ggtgcaaattatcaggtattgactgctttggcaagttccttccatcatctccagcctctc
aaggttgcagggttcagctttgcatggcttgagttgattagtcatagaagtttcatgcca
aagttactcacaacaaatgcacagaagggttggccttattttcaaagattgctggtagac
ttgttccagttcatggagccattcctaagaaatgccgaacttgccgagccggttcacatt
ctctacaaagggacactcagggtgttgttagtgctacttcatgattttccggagttcctt
tgtgattatcatttcagtttttgtgatgtcatccctcctagctgcatacagatgcgaaat
ataatccttagtgcatttcctcgcaatatgaggctaccagatccttctactccgaattta
aagattgatctgcttgcggagattagtcaatcaccaagaatcctttccgaggttgatgca
actcttaaagctaggcagatgaagaatgataccgatgagtatctcaagtcaaagcaacaa
ggatccacttttctcaccgagttgaagcaaaagcttatgctttctccagctgatgcagct
cgtgctggaactcgttacaatgttcctctaattaactcccttgtactttatattgggatg
caggctattcaacaagcaagatcaccttctcattcacaatcaatggctagtatgagttca
ttcttggtgagtgctgcgttggacattttccagtctttgataatggatctcgacacagag
ggccgctacctatttctaaatgctgttgcaaaccaattacgatacccaaacaaccacaca
cattacttctctttcattcttctttacctttttgctgaatcgaatcaggaagtgattcaa
gagcaaatcactcgagtactattggaacgtcttatcgttaataggcctcatccctggggt
cttttgattacttttattgaactcatcaagtatccaaggtacaacttctggagtaagacg
ttcacaagatgtgcacctgagattgagaagctattcgagtcggtttcgaggtcttgtggg
ggtccaaaacctgttgatgaaagtgtagtttctggaggaatgccagacaatatgcactag
DBGET
integrated database retrieval system
