Erythranthe guttata (spotted monkey flower): 105972066
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Entry
105972066 CDS
T07346
Name
(RefSeq) tetratricopeptide repeat protein SKI3
KO
K12600
superkiller protein 3
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105972066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105972066
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105972066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_14
TPR_16
TPR_19
TPR_9
TPR_CcmH_CycH
TPR_8
TPR_20
TPR_12
BTAD
TPR_NPHP3
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
105972066
NCBI-ProteinID:
XP_012852453
UniProt:
A0A022Q824
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MALEEEEYFASVKQLEESVNSNPTDPSLRFNLGVLLWEMGEKEAEMREKAVEHLMVAAKL
NPQNGAAFRYLGHYYALVSPEPQRALKCYQRAVSLNPEDSDAGEAICDLLDEEGKESLVL
AVCRGASEMSARAFWAFRRLGYLLAHQKKWSEAIQSLQYAIRGFPTCADLWETLGLAYQR
MGMLTAALKSYARAVELDDSRVFALIESGNISLMLSSFRKGIEQFQQALNISPHNVSAQY
GLGSALLGLAKECVNMGAVKWGSSLLEEASEVAMRGTSLAANFSCLWKLHGDIQLIYARC
YTWTPTHADEISFSTSISTWKRNCFIAARNSRRSYQRALHLAPWLANIYADVAIASDLCL
SLKESPEEELNVWSVAEKMCIGGILLEGYNEEFWVALGCLSDHIPLKQHALIRGLQLDVS
LAVAWAYLGKLYREEDEKQLAQQAFDSARSIEPSLALPWAGMSADASTRNIDQNEAYECC
LRAIQTFPLAEFQVGLAKLALHSSYLSSSEVFGAIQQALLRVPDYPESHNLNGLVCESRS
DYQSAITSYRLARCVLKSFEDESSISHVTDVSINLARSLCMAGNAGDAVEECEYLRQKGH
LDSKGLQIYALCLWQLGKNDMALSMTRSLASSILSMEENDAAASISFICRLLYHISGQDS
AIVSILKMPTELFHGSKISFIVSAIHVLDQKNQLEAIVSRSRSFVTSREDIIAMHILITL
GKLLKNGHEDSLGIQKGVDHLRKALHMYPNSSVLRNLLSYLLLSSKEWRDLRLATRCSFL
DLSEHPKDGGMKSACEILGAVTVACYETASNNEKFSIPISGHQQPFVSGSIKLLQKFLHQ
EPWNRNARYLLTLNCLQKAREERFPVHVCRVLERLTAVSLSNRCLSTEDSLSQYQNFQLL
LCAAEVNLQQGNNNECSRLARSALGSSVHNSYLFFAHLLLCRACAAEDDTVGLRKEYRRC
LELGTDFHIGWICLKFIESRYGLQDDSTVLLSSFEDCSKDDQHSRHMWMALFNMVQGLVA
IWFGDFVAAEELFAQACSLADGESCLLLCHGAICMELARQKCESHYISHAIRSLKKAKNT
SPKRLPIVSLLLAQAEASLGSKSKWEINIHDEWFSWPPERKPAEILFQMHLLSTQRKDVY
TPSSSLDYGDTSIRWILRAIHTNPSCSRYWRFLLKDISY
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgaggaagaagaatacttcgcttctgtaaagcagttggaagaatcagtgaat
tcaaaccctaccgatccgtctcttcgttttaatctgggcgtgttgttatgggaaatggga
gagaaagaggcggagatgagagagaaagcggtggagcatttgatggtagcggcgaagctc
aaccctcagaatggtgctgcattcagatatttgggtcattattatgccctcgtttcgcct
gagccgcagcgtgctctcaagtgctaccagagagctgtttccctcaaccccgaagattcc
gatgctggggaagcaatttgtgatttactggatgaggaagggaaagagagcttggtgctt
gctgtctgtcgtggagcttctgagatgtctgcgagggctttctgggcttttcgtcgactg
ggataccttctggctcatcagaagaaatggtccgaagccatacagagcctccagtatgcc
attcgtggttttcctacatgtgctgacttatgggagacattgggtcttgcctaccaacgt
atgggcatgttgactgctgcacttaagtcgtacgcaagagcagttgagttggatgattca
agggtttttgcattgattgaaagtggaaatatttctttgatgcttagttcttttagaaag
ggaatcgagcaatttcaacaagctttaaatatttcacctcacaatgtatctgcacaatat
gggcttggttctgcacttcttggtttggcaaaggaatgtgtcaatatgggtgccgttaaa
tggggatcttcgctcttagaggaagcatcggaagtggccatgcgtggtacatctttagca
gcaaacttctcatgtttgtggaagctacatggagacattcagcttatatatgccagatgt
tacacatggacgcctacacatgctgatgagatatctttcagtacttctatcagtacatgg
aaaagaaattgctttatagctgctagaaattcccgtcgctcctatcagcgtgccttgcac
ttggccccttggctagctaatatatatgctgatgttgctattgcatcagatctttgtttg
tctcttaaggagtctcctgaagaggagctgaatgtttggtctgtggctgaaaaaatgtgc
atcggtggtatactactcgagggctacaatgaagaattttgggtggcactgggatgttta
tcagatcatattcctttaaaacaacatgctttaatacgtgggttgcaattggatgtatct
ctagctgttgcatgggcgtacctcgggaagctttacagggaggaggacgaaaagcaattg
gctcagcaagcatttgattctgctagaagcatagaaccttcacttgcattaccatgggca
ggcatgtcagctgatgccagtactagaaatattgaccagaatgaagcatatgagtgctgt
ttacgggcaatacaaacatttccgcttgcagaattccaagttggtcttgcaaagcttgct
ttgcattcgagttatttgtcatcttcagaggttttcggagccattcaacaggcactgctt
cgtgttccggactatcccgaatctcacaatttgaatgggctagtttgtgaatcaaggtct
gattatcaaagtgctattacctcctacaggctggcacgatgtgttctgaaatcttttgaa
gatgaatcatcaatatcccatgtaacagatgtatccatcaatttggccagatcactttgc
atggcaggaaacgcaggcgatgcagttgaagagtgtgagtatttaaggcaaaaaggacat
ttggattctaagggtctgcaaatatatgctctatgcttatggcaacttggcaagaacgat
atggctctgtccatgacgagatcacttgcttcaagcattttatcaatggaagaaaatgat
gctgctgcttccattagcttcatctgtaggttgctttatcacatttctgggcaggattcg
gcaatcgtaagcattttgaagatgcccacggaactgtttcacggttcaaagattagtttc
attgtttccgctattcatgttctggaccaaaaaaaccaacttgaggctattgtttctaga
agccgttcctttgttacatcgcgtgaagatatcatcgcaatgcacattttaattacactt
ggtaaacttctgaagaacggacacgaggactcccttggaattcagaagggagtagatcac
cttaggaaagcacttcacatgtaccctaacagtagtgtgcttagaaatctccttagttat
ctcttactatcaagcaaagaatggagagatctccgtcttgcaactagatgctctttcctg
gacttgtccgagcatccaaaggatggtggcatgaaatctgcatgtgagatcctcggtgct
gtaactgttgcttgttatgagacagcaagcaataatgaaaaattctcgattccaatctct
gggcatcaacagcctttcgtatcgggatctatcaaactgttgcaaaagtttttgcatcaa
gagccgtggaatcgtaatgcaaggtatttgctcacgttgaactgtttacagaaagcacgt
gaagaaagatttcctgtacatgtttgccgtgttcttgaacgccttacagctgtctctcta
tctaatcgttgtctctcaactgaagactccttatcccaataccagaatttccaacttcta
ctctgtgcggctgaggttaatctacaacaaggcaataacaatgaatgctcaagacttgca
agaagtgctttaggttcttccgttcataatagctatttatttttcgctcatttgctacta
tgccgtgcgtgtgctgctgaagatgataccgttggcctgagaaaagaatacaggcgatgc
ttggaacttggaactgattttcatattgggtggatttgtctcaagtttattgaatctaga
tatggcctacaagatgattctactgtattactctcgagcttcgaagattgctccaaagat
gatcaacattcgcggcatatgtggatggctctatttaatatggtgcagggtttggttgct
atttggtttggcgattttgttgctgcagaagagttgtttgcacaagcttgctctttagct
gatggcgagagttgtctccttctgtgtcatggtgctatctgtatggagcttgccagacag
aagtgcgagtcgcactatatatcacatgctataagaagtctcaagaaagcaaaaaataca
tctccaaaacgtttgcctatagtttcactattgctggcacaagcggaagcaagccttggc
tccaaatcgaagtgggagatcaacattcacgatgagtggttttcttggcctccagaaagg
aaaccggctgagatcttatttcaaatgcatttgctttctacacaacggaaagatgtttat
acaccgtcttctagcctagattatggcgacacctctataagatggattttacgagcgatc
cacacaaatccgtcatgttcgagatattggaggtttttgctaaaggatatttcatactag
DBGET
integrated database retrieval system
