Elaeis guineensis (African oil palm): 105032443
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Entry
105032443 CDS
T03921
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105032443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105032443
03036 Chromosome and associated proteins [BR:
egu03036
]
105032443
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105032443
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105032443
PBAF complex
105032443
GBAF(ncBAF) complex
105032443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
105032443
NCBI-ProteinID:
XP_019701856
UniProt:
A0A6J0PBB9
LinkDB
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Position
1:complement(119851758..119880101)
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AA seq
517 aa
AA seq
DB search
MASNSNNQSRAIGGPSPLLNRGIGSPAANQPSLLRPPSLPQAPGGSPFQGLCQTPPQSQV
RSPFQVQFGNAVLGTVGASSPSFPTPGSSAAKRPPQKLLARPTAPAPAAANFSFKSAELT
PAARRKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALARKKIDIQEGLKNPPSL
QRTLRIYVFNTFANQTRTIPEPKNSEPPWWSLKIIGRILEDAVDPDPASGLPKPNPMYPK
FSSFFKRITIALDSTLYPENPTIIWENSRSPAPHEGFEVKRKGDKEFTASIRLEMNYNPE
KFKLSPALMEVLGIEVDTRARIIAGIWQYVKAKKLQNPSDPSYFTCDPPLKKVFGEDKMK
FAMLSQKISRHLSTPQPINLEHRIRLSGNGAVGNACYDVLVDVPFPLQREMSAFLANTEK
YKEIEACDEAICTSIKKIHEHRRRRAFFLGFSQSPVEFINTLIASQSRDLKLVAGEASHN
AEREHRSDFYNQPWVEDAVIRYLNHKPAGGNDAPGST
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaacagcaacaaccaatcaagggcaatcgggggcccttcgcctcttctgaac
cggggaataggctcgccggcggccaaccagccctcccttctccgcccaccctcgctgcct
caggcgccgggtggttcccctttccaaggcctttgtcagaccccgccccagtcccaggtc
cgctccccgttccaggtccagttcggaaacgccgtgctcggcaccgttggagcctcctcc
ccttccttccccaccccaggctcgtcggccgcgaaaagaccccctcagaagctgctggct
cgccccacggcacccgcccctgctgctgccaattttagcttcaagtctgcggagctgacc
ccggctgcccggagaaagaagcggaagcttccggagaagcagctgcctgaccgggtcgct
gctctcttgcccgaatccgccctctacacccaattgcttgaattcgaggcccgggtggat
gctgcccttgcaaggaagaagattgacatccaggaaggcttaaaaaaccctccttccttg
cagaggaccctcaggatttatgtcttcaatacttttgccaaccagacccgcacaattcct
gagccaaagaattctgagcccccttggtggtccctgaagatcattggtaggatattagaa
gatgctgtggatcccgatcctgccagcgggctgcctaagcccaatcctatgtatcctaag
ttctcatctttctttaagaggattaccattgctctggactcgacactctacccagaaaac
ccgacaattatatgggagaattcacgctcaccagcaccacacgagggctttgaggttaag
cggaaaggagacaaggagttcactgccagcataaggctggagatgaattataaccccgag
aagtttaaattgtcacctgcattgatggaggttctggggatcgaggttgatacacgtgcc
agaattatagctgggatatggcaatatgtcaaggcaaagaagttgcagaacccaagtgat
ccctcctattttacttgtgatccacctttgaagaaggtattcggagaagacaagatgaag
tttgccatgttgtcacagaagatctcgcggcatttgtctactccacaaccaattaatttg
gagcataggatcaggctttcagggaatggtgcagtgggcaatgcttgttatgatgtgctg
gttgatgttcctttcccactacagagagaaatgtcggccttccttgctaacacagagaaa
tacaaagaaattgaggcctgcgatgaagctatttgcacttctattaagaagattcatgag
caccgcaggaggagggcattctttcttgggttcagtcagtcgccagtggagtttataaat
actttgattgcttctcagagtagggacttgaagcttgttgctggggaagcaagtcataat
gctgaaagggaacatcgttctgacttctataaccagccatgggttgaagatgctgtcata
cgttatctaaatcacaagccagcagggggcaatgatgctcctggtagcacatga
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