KEGG   Elaeis guineensis (African oil palm): 105047579
Entry
105047579         CDS       T03921                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105047579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egu03041]
    105047579
Spliceosome [BR:egu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105047579
 Complex B
    105047579
 Complex C
   U2 SnRNP specific factors
    105047579
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N SAP
Other DBs
NCBI-GeneID: 105047579
NCBI-ProteinID: XP_010924860
UniProt: A0A6I9REV5
LinkDB
Position
6:complement(4196133..4208830)
AA seq 504 aa
MSSTLLEVTRAAHEDVERLERLVVKELQREPANNRERLFQNHRVRHMIDLIRTTTDKLVE
IYEDKDNARRDEIGALGVGGQNNPFPAFYDRLKEIRDYHRRHPAARVVDANEEFEELLKE
EPQIEFSGEEAFGRYLDMHELYNKYINSKFGEPMEYSAFLETFFQTHKIPRNLKLTRQYR
EYLENVLEYLISFMERTQPLQDFGRIFTKVEVEFEEQWADGKVLGWENKGMENGHVSSQE
SVIDLDYYSTVEELMEVGPEKLKEALAARGLKTGGTLQQRAERLFLTKYTPLEQLDRKHF
AKGSRGSEQNGVAEETNSKKEIALVEAKMQRLCELLKETIIQTKENVIKKQALTYEEMEA
EREEEEIQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYW
GRRAFERHFKEWRHQHGMRCLNIPNTKNFNEITSIQEAKDLWEKIQERQGLIKWRPDLEE
EYEDREGNIYNKKTYTDLQRQGLI
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtcttcgacccttctcgaggtgactcgggccgcccacgaggacgtggagcggctcgag
cgtcttgtcgtgaaggaactccagagggaaccggccaacaatcgggagcggctcttccag
aaccaccgcgtccggcacatgattgatctcatcaggaccaccaccgacaagcttgtcgag
atatatgaggacaaagacaatgcgaggagagatgagattggggcgctgggagtgggtggc
cagaacaatccttttcctgctttctatgaccgtttgaaggagatccgtgactaccatagg
cgacatccagctgcacgcgtggttgatgcgaatgaagaatttgaagagttactgaaggaa
gaaccacaaattgaattcagcggagaggaagcttttggtcggtacctggacatgcatgaa
ttatacaacaagtacatcaactcaaaatttggagagcctatggaatactctgctttcttg
gagacattttttcagacccacaaaattcctcgcaatctgaagttgaccaggcaatataga
gaatatttggagaatgttctggaatatctgatttcatttatggagcgtacacagcccctg
caagactttgggagaatatttacaaaggtggaggtggagtttgaagagcagtgggctgat
ggtaaggtacttggatgggaaaacaaggggatggaaaatgggcatgtttcatcacaagaa
tctgtgattgatcttgattattacagtactgtggaagaacttatggaagtgggccccgaa
aaattgaaagaggccttagctgctcgtggattgaaaactggtggtactcttcagcagcgt
gcagagcgcctttttttgacaaaatacacacccttggagcaattagacagaaaacatttt
gcaaaaggttcacgtggttcagagcaaaatggagttgcagaagagaccaactctaagaag
gaaattgctttagtagaggcaaagatgcaacggttatgcgaattgctaaaagagacaatc
atacagacaaaggaaaatgtcataaagaaacaagctttgacttatgaggaaatggaggct
gaacgtgaagaggaagaaatacaagctgatactgagagtgatgatgaagagcagcaaatt
tacaatcctctaaagttgcctatgggttgggatggcaagcctataccctactggctttac
aagcttcatggtcttggccaggaattcaagtgtgaaatatgtgggaattatagttattgg
ggacggagggcgtttgagcgtcatttcaaggaatggcggcaccagcatggaatgcgttgc
ctaaatatacctaacactaagaacttcaacgaaattacatccattcaggaagcaaaggat
ctgtgggagaaaatccaagaacgacaaggattgatcaagtggcgtccagaccttgaagaa
gagtacgaagacagggaaggtaacatctataataagaaaacatacactgacctgcaacgc
caaggcctcatctaa

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