Elaeis guineensis (African oil palm): 105056091
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Entry
105056091 CDS
T03921
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like isoform X1
KO
K07466
replication factor A1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03030
DNA replication
egu03420
Nucleotide excision repair
egu03430
Mismatch repair
egu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105056091
03420 Nucleotide excision repair
105056091
03430 Mismatch repair
105056091
03440 Homologous recombination
105056091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egu03000
]
105056091
03032 DNA replication proteins [BR:
egu03032
]
105056091
03400 DNA repair and recombination proteins [BR:
egu03400
]
105056091
Transcription factors [BR:
egu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105056091
DNA replication proteins [BR:
egu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105056091
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105056091
MMR (mismatch excision repair)
105056091
DSBR (double strand breaks repair)
HR (homologous recombination)
105056091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
MalF_P2
Motif
Other DBs
NCBI-GeneID:
105056091
NCBI-ProteinID:
XP_010936470
UniProt:
A0A6I9S3L3
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Position
13:complement(6683116..6687218)
Genome browser
AA seq
618 aa
AA seq
DB search
MGKSVTTGAISVLLSNPSPDSSSEIPEIIVQVVDLKPIGSSSTRFTFMASDGKAKLKAML
PSHFSSEIHSGNLQNLGLIQILDYTCNAIPNQTEKALIVTKCEVVSPSLEMEIKSDVEKV
ESGILLKPKKDESRILLKPKQEAVSKSAAQIMHEQCRNSAPAARLAMTRRVQPLVSLNPY
QGNWTIKVRVTNKGSLRSYKNARGEGYVFNIELTDEDGTQIQATMFNEAASKFYPKFELG
KVYYISKGSLRVANRQFRTVQNDYEMNLNENSIVEEADGEAFIPETKYNFVKIDQLGSYV
NGREIVDIIGIVQNVSPTLSVRRKSNNETIPKRDITVADDSSKTVTVSLWNELATNVGQE
LLDMADTTPVVAIKCLKVGEFQGVSLSTLSRSTVLINPDLPESEKLRTWYDSEGKGTQMA
SVGSTMNSSSKTGLRSMYSDRVLLSHITNDPTMGQDKPVYFSIKVYATYIKPDQTMWYRA
CKTCNKKVTEAVGSGYWCEGCQRNDDQCSLRYIMVVKVSDHSGEAWLSVFNEQAEKIIGC
TADELDRIKTEEGDEKYQLKLKEATWVQHLLRVSVTQSEYMNEKRQRITIRSQATVDFSA
ESRYLLEEISKMSISSSN
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatctgtgacgactggagctatctccgttctcctttccaacccttctcccgat
tcttcttccgagattccagagatcatcgtgcaagtcgtggatctcaagcccatcggcagc
agttctacccgattcacatttatggctagtgatgggaaggcaaagctcaaggcgatgctt
ccgagtcatttttcttcagaaatccattcaggaaatcttcagaaccttggactcattcag
attcttgattacacatgcaatgccattcccaaccaaaccgagaaggctttaatcgtgaca
aaatgtgaggtggtttcaccttctcttgaaatggagatcaaaagtgatgtggaaaaagtt
gaatctgggattttgttgaaacctaagaaggatgaatctaggattttgttgaagcctaag
caggaagcggtgtccaagtcagcagctcagattatgcacgagcaatgcaggaattctgct
cctgctgcaagattggcaatgacaagaagagttcagcctcttgtttccttgaatccttat
caaggcaactggaccataaaggttcgagtcacaaacaaaggaagtttgaggtcttataag
aatgctagaggagagggttatgttttcaatatagagttgacagatgaggatggtactcag
atacaggccaccatgttcaatgaagcagcaagcaagttttatcctaaatttgaattggga
aaggtctactacatttcaaagggatctcttagggttgcaaacagacagtttagaactgtg
caaaatgactatgagatgaacttaaacgaaaactctatagttgaagaggcagatggagaa
gctttcataccagagacaaaatataactttgtcaaaatcgatcaactggggtcatatgtt
aatggcagggagattgtagatataattggtattgttcagaatgtttcaccaactttaagt
gttcgaaggaagagcaacaatgaaactatcccaaagcgtgatattactgtggcagatgat
tcgagcaaaactgtcaccgtctccctatggaatgaacttgctacaaatgtaggccaggag
ttgctggacatggctgacactacccctgttgtagctatcaaatgcctcaaagtaggagaa
tttcaaggtgtctctctttcaactttaagcagaagcacagttctaataaatccagattta
cctgaatcagagaagcttagaacctggtacgattctgaaggaaaaggtactcaaatggca
tctgttggctcaaccatgaactcttcatcaaagacaggacttaggtctatgtactctgat
agagttttactctctcatattacgaatgacccaaccatgggtcaggataagcctgtgtat
ttcagcataaaagtgtatgcaacttacatcaagcctgatcaaacaatgtggtatcgggca
tgcaaaacctgcaacaagaaagtgactgaagctgttggttctggctattggtgtgaaggg
tgccagagaaatgatgatcagtgctctttaaggtacataatggtagtgaaggtttcagat
cattcgggggaagcttggctctcggttttcaatgaacaagcagagaaaataattggatgc
actgctgatgagctggataggattaaaacagaggagggtgatgagaaatatcaactcaaa
ctgaaggaagcaacttgggttcaacatcttctccgagtcagtgtgacacagtctgagtac
atgaatgagaagaggcagaggataaccatccggtctcaagcaacagtagatttctctgct
gagtcgagatatctgttagaagaaatatccaagatgtcaatctcttcttccaactag
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