Egretta garzetta (little egret): 104134255
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Entry
104134255 CDS
T05152
Symbol
XRCC6
Name
(RefSeq) X-ray repair cross-complementing protein 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104134255 (XRCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egz03041
]
104134255 (XRCC6)
03400 DNA repair and recombination proteins [BR:
egz03400
]
104134255 (XRCC6)
Spliceosome [BR:
egz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104134255 (XRCC6)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104134255 (XRCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
SAP_new25
TSC22
Motif
Other DBs
NCBI-GeneID:
104134255
NCBI-ProteinID:
XP_009646069
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MSLKKRRPRVLIAIDNYLKGRAAQGAPACFTPHPRRDRLGNRHGYGYRLVDYRFSGRDSL
IFLVDASKAMFESDGDGVTPFDMTIQCIRNVYTSKIISSDRDLLSVVFYGTEKNKNSADF
KHIYVLQELDNPGAKRVLELDRYRGDEGRVLFRETFGHNADYSLGEALWACSNLFSDVRV
RLSHKRIMLFTNEDDPHANDNAKAKLARTRAGDLRDTGIILDLMHLKKPGGFDISLFYRD
IVNVAEDEDLGIQPEESEKLEHLMKKVRAKETKKRTLVRLNLYLNKDLSLSVGVYNLVRK
AYKPYPVKLYRETNEPVKTKTRMFNGKTGSLLLPSDTKRAQTYGNRQIVLEKEETEELKR
FDSPGLFLIGFKPLSMLKQHHHIKPSQFIYPEESLVSGSTTLFNALLMKCLEREVMALCR
YTARRNTPPRFVALVPQEEEVDEQKVQIAPPGFHVIFLPYADDKRNVDFTPKVPASREQV
DKMKEIIQKLRFKYRTDSFENPVLQQHFRNLEALALDMMEPEQAEDLTMPKAEEMNRRLG
NLVEEFKQLVYPPDYNPDEKAVKRKQASDGQTEKRPKVEISKDELRNHVRKGTLGKLTVP
VLKDACRLCGLKGGGKKQELMDALTEYFEEN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagaagagaaggccaagagtccttattgccatcgacaactacctaaagggt
agggctgctcagggagccccggcgtgcttcaccccccacccccgccgggatcgccttggg
aaccgccacgggtatggctaccggctagtggactacaggttctcaggccgggacagcctc
attttcttagtcgatgcctccaaggccatgtttgagtccgacggggacggggtgactccc
ttcgacatgaccatccagtgcatccggaatgtgtataccagcaaaattattagtagtgac
agggacttgttaagtgttgtgttctatggtacagaaaagaacaagaactcagcagatttc
aagcacatctatgttcttcaggagctggacaatccaggcgcaaagcgtgttctagagctg
gaccgctacaggggagatgaaggacgagtacttttccgtgagacctttggccacaatgct
gactattcactgggtgaagcactctgggcctgctctaatcttttcagtgatgtccgagtc
agactgagccacaaaaggattatgctcttcaccaacgaggatgaccctcatgccaatgac
aacgctaaagccaagctggccaggaccagagctggtgatctgagagacacagggatcatc
ctggacttgatgcacttgaagaagcctggagggtttgatatctctctgttctacagggat
atcgtaaatgtagcagaggatgaggaccttgggatccaacctgaggagtcagagaaattg
gaacatctcatgaagaaagtacgagcaaaggagacaaagaaacggactttagtcaggtta
aatctgtatctgaacaaagatctgtcactttctgttggtgtttacaaccttgttcgaaaa
gcttataagccatatccagtgaagctttatcgggaaactaatgaaccagttaaaactaaa
acaaggatgtttaatggaaaaacaggcagcttgctcctgcctagtgacacaaaaagggct
cagacatacggaaaccgacagattgtgctggagaaagaggaaacggaagaattaaaacgg
tttgattctccaggcttgtttctgattggcttcaaaccactttcaatgctaaaacagcac
caccatatcaagccctcccagttcatctatcctgaggagtccctagtaagtgggagtaca
acgctatttaatgccttattgatgaaatgcttggagagggaagtgatggcactgtgcaga
tacaccgcccgccggaacaccccccctcgctttgtggctctggttccccaggaggaagag
gtggatgagcagaaagtgcagatagcccctccaggtttccatgtcattttcctaccgtac
gcagatgacaaacggaacgttgattttacaccaaaggtaccagccagtcgagagcaggtg
gacaaaatgaaggaaataattcaaaaactccgattcaaatacaggactgatagctttgag
aacccagttttgcagcagcacttcaggaatctggaggctttggcgctggatatgatggaa
ccagaacaagctgaggatcttacaatgccaaaggctgaagagatgaaccgcaggctgggc
aatctggtggaggagtttaagcagctggtttatccccctgactacaatcctgatgagaag
gctgtaaagcgaaaacaagcttctgatggtcaaaccgagaagaggcccaaggtagaaatc
tcaaaagatgagctgcggaatcatgtgcggaagggcactctaggcaaactcactgtacct
gttctgaaggacgcgtgcaggctttgtgggctgaagggtggggggaagaagcaggagctc
atggatgcactaactgaatacttcgaagagaactaa
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