Empedobacter haloabium: E7V67_019750
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Entry
E7V67_019750 CDS
T09755
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7V67_019750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehb03019
]
E7V67_019750
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_019750
Enzymes [BR:
ehb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E7V67_019750
Messenger RNA biogenesis [BR:
ehb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E7V67_019750
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E7V67_019750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
AAA_30
PcrA_UvrD_tudor
AAA_25
Glyco_hydro_57
DUF2152
Motif
Other DBs
NCBI-ProteinID:
WUR11916
UniProt:
A0ABZ1UGT0
LinkDB
All DBs
Position
complement(4514797..4516500)
Genome browser
AA seq
567 aa
AA seq
DB search
MVTRNLSAAEKRAAVRIGTARARLIRNLLHNVFGVDQLRDGQRRVIDSVLEGRDTLAIMP
TGSGKSLCYQIPASIFKGTTVVVSPLISLMKDQLEKLEEIGIGAAQLNSSLSREEELEAL
DSIRNNLSNIVFCTPERLVTPEFLDVLKETEIALLVVDEAHCISQWGHDFRPAYLEIGAA
RRALDNPPVLALTATATPDVIDDIGRQLGTRMHVVNTGIYRPNLHYRVIQITNPAEKTAE
ALRLVRETAGVGIIYAATVKAAEEMHRALQEAGESVALYHGRLPARERKENQDLFMNGER
RVMVATNAFGMGIDKSDTRFVIHLQVPANLEAYYQESGRAGRDGENAECTLLYFQDDKRL
QQFFLVKHYPSAHELRTVYDAVVPLVPCQPGVIADALPDMADSKLKVCLKLLKDGKLLRQ
NRKLDYLLTNKDPNAVIFDQLSAIYQHKQERDREALEQMVGYAQSGYCRWKLMLDYFNDA
SAGLEHCGCCDNCVSPPSVQVEEGEAVLFEPPPEPSVPPGPVIAVGSQVKVPKFDIGTVL
SVAGDQITIEFPENTTKTFMAEFVQPV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtaacccgaaatctctccgcagccgagaaacgcgccgccgtgcgcatcggcaccgcg
cgcgcgcgcctgatccgcaacctgctgcacaacgtgttcggcgtggaccagttgcgcgac
ggccagcgccgcgtcatcgacagcgtgctggaagggcgcgataccctggccatcatgccc
accggcagcggcaagtcgctctgttaccagattcccgcctcgatcttcaagggcacgaca
gtcgttgtctcgcccctgatctcgctgatgaaggaccagttggaaaagctggaggaaatc
ggcatcggcgcggcgcagttgaacagcagcctgtcgcgcgaggaggaactggaagcgctg
gacagcatccgcaacaacctcagcaacatcgtgttctgcaccccggagcgcctggtcacg
ccggagttcctggacgtgctgaaggaaaccgagattgccctgctggtcgtcgacgaggcc
cactgcatctcgcagtggggccacgatttccgcccggcttacctggagatcggcgcggcc
cggcgcgcgctggacaatccgcccgtgctggcattgacggcgacggccacgccggatgtg
atcgacgacatcggccgccagctgggcacgcgcatgcacgtggtgaacacgggcatctac
cggcccaacctgcattaccgcgtcatccagatcaccaatcctgccgaaaagacggccgag
gcgttgcgcctggtgcgcgaaacggcgggcgtgggcatcatctacgccgccaccgtcaag
gcggcggaggagatgcatcgcgccttgcaggaagccggcgaaagcgtcgcgctgtaccac
ggccgcctgccggcgcgcgagcgcaaggaaaaccaggacctgttcatgaacggcgagcgc
cgcgtgatggtggccaccaatgccttcggcatgggcatcgacaagagcgacacccgcttc
gtcatccacctgcaggtgccggccaacctggaggcctactaccaggagtccggccgcgcc
gggcgcgatggcgaaaatgccgaatgcacgctgctgtacttccaggacgacaagcgcctg
cagcagttcttcctcgtcaagcactacccgtcggcgcacgagctgcgcacggtctacgac
gcggtggtgccgctggtaccgtgccagccgggcgtgatcgccgacgcgctgccggacatg
gcggacagcaagctgaaagtctgcctgaagctgctcaaggacggcaagctgctgcgccag
aaccgcaagctcgattacctgctgaccaacaaggaccccaacgcggtgatcttcgaccag
ctctcggcgatctaccagcacaagcaggagcgcgatcgcgaggcgctggagcagatggtc
ggctatgcgcagagcggctactgccgctggaagctgatgctggactatttcaacgacgcc
tcggccgggctggaacactgcggctgctgcgacaactgcgtgtcgccgccgtcggtgcag
gtggaggagggcgaggcggtgctgttcgagccgccgccggagccctcggtgccgccgggc
cccgtgatcgcggtcggcagccaggtgaaagtgccgaagttcgacatcggcaccgtgctt
tccgtcgcgggcgaccagatcaccatcgagttccccgagaatacgacgaagacgttcatg
gccgaattcgtgcagccggtgtga
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