Encephalitozoon hellem: EHEL_111260
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Entry
EHEL_111260 CDS
T02287
Name
(RefSeq) negative regulator of transcription cell division control protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHEL_111260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehe03019
]
EHEL_111260
Messenger RNA biogenesis [BR:
ehe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EHEL_111260
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EHEL_111260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNOT1_CAF1_bind
CNOT1_HEAT
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
NOT1_connector
Not1
Motif
Other DBs
NCBI-GeneID:
13466838
NCBI-ProteinID:
XP_003888380
LinkDB
All DBs
Position
XI:complement(145389..149771)
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AA seq
1460 aa
AA seq
DB search
MDEKVYKQEIKDVLEKSDPKEVDRGFMDDVLQKIRKKREVTPQEVARAILFMADFPDREW
DLPSIVGSMKSNLEEINWRDVYSCFLDVNFSIWTLESLYVIIDCWVHISGIITVPYEIFF
KRWKNERAQIYFLRLIIESDEKRTQLYSNVFFSRIISIEDSRSYRFKNVLGYESNFNCVE
LFQCIGMLGSIPLVELIARKSPEWCAAGLGFIQPRFSRMFEELLIGFARGAPNSFILHVL
FKNHPEMMLQKALILVREGIPVSRILDIFLEHKMLPVVSELLDPPELCFDIIVLSSIRDH
LNLGIWLSNNLTTRKDEFVRSLVLYLDSKVSKCKEPEKMFPLNVEIMGTFTKAVEQYVRI
LKPETVGMYNEFKSKIPHGLRAQRSKDIKIEEEASNFISQIINSQRGIESSINQIKEFLR
GNALSKELASRIFSALLENYGSLYKLPNSDLIALLYGGLIKEGVFPKPYQRMAIEYIKGS
LKYPENDREYSFGFRCLEVFLPSYPSILPEIEEIESVNNILVKKELILVDSSTHPMLELE
DMAKLIFKCDSKNERIGEIIKTLGSEAENDGHRLSDAISRSLVEKEEVILYIIQNVLLED
CRRLILAVESLGNDFYLKFVRKSLEFLKMFLDYRNRSENQIAKNLGFILGGVMLAKNRIV
TSEQFDFKKFVVKSVECRRILFGVKFISSFLKQGKHGIVFIPNNPWMMSILSLLSEIYSC
TPKAVRDEIQGLFDYFSVDLVPRPFKSLGLKSKKYLAEYVIEDGDLVVRHVISLALDLSV
REICGAIVEKACSVAIQTGMVLFRTMCVEKGMEYVLFRNMVVNLTKFLCLVSAQEPIKAC
ISGNVSYFMKLCSLDFSTERVFKVALENQAVCCELIQRAGVSKVSESISGCYSSLEYRNG
DAGDVRLSLLEDPGHIEKVAIKPVDSGEYQEIKAHLGQLSKKIPYSKKNIVADEWRGLLN
EGKEQVFKRILESVENNEDKDEECIRLCRYITGHLIKSGSKEDFLFECMEKIFKISFKTQ
KEVLGWLIYSNDPRKFSVSLVSKFIEHNLINVVEYDQALSKISLGDGNLDFVIALLTSLI
TTEVQICTVYDFICTLEMLAGHSDNPKVFDFFQKISNLMMHIEAKGVSEYDEYVRNCRFT
TVPEMFLPEFMERANYPESLDIRSAFKVSWDHFIRYHRIPTAYCYLKVDPLPNLIKDKLY
ESIKDSLFVFLEAYRKRNYLFFKLYARFIVKILDVIEDTPTNRSLVFSVLEVLSPSRVPG
FSSCFLEILSHKFVLKYFDSEEGVVLAAETLRCGFYSPKFMYPITQIMQVLKRNPTYVRM
YSSYLAYCCPQEYPHIKNFINQTRDRIVPVEGQNSFFRLRTALQNRTSVKVTDLGIGKNL
WVYLIDNLNETDTISSTVIESIKFMIERKMHLEEILTMLWIRMKAGGAPKALAACYDEIS
SFDFCRVFLKSLESHSYNKL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaaagtatacaagcaagagataaaggacgtacttgagaagagtgatccgaaa
gaagtggaccgaggctttatggatgatgtattgcagaagataaggaagaagcgggaagtg
actccccaggaggtagcaagagccatcttatttatggcagactttccggacagagagtgg
gatctcccgtcaatagttgggtcgatgaagagcaatctcgaggagattaactggagggat
gtttattcatgcttccttgatgtgaacttcagcatctggaccttggagtctttgtatgtt
atcattgactgctgggtccatattagtgggatcattactgttccatatgagatatttttc
aagagatggaagaatgaaagggcgcaaatatattttttgaggctgattatcgagagtgat
gagaagaggacgcagctgtattcgaatgtatttttcagcaggatcatcagtattgaagat
tcgagaagctatcgctttaagaatgtgctggggtacgaaagcaatttcaactgtgtggag
cttttccagtgcattgggatgcttgggtcgattccattggtcgagctgattgcaaggaag
tcgcctgagtggtgtgcagcggggcttgggtttattcagccgaggttttctaggatgttt
gaggagcttttgataggctttgcaagaggagcacccaatagctttatcctgcatgttctg
ttcaagaaccatcctgagatgatgcttcagaaggcgctgattcttgttagagaggggata
cctgtgtctcggatccttgacatattcctagagcacaagatgcttcccgttgtttctgag
ctgctggacccgcctgagctttgctttgacatcattgtgctgagctctatccgggatcat
ttgaatcttggtatttggctgtccaataacttgacgaccaggaaagacgagtttgttaga
tcacttgtgctatacttggactcgaaagtatcgaagtgcaaggagcctgagaagatgttt
ccgctcaatgttgagatcatggggactttcacgaaggctgtggagcagtatgtcaggata
ctgaagccggagacggttgggatgtacaacgagtttaagtcgaagattccccatgggctt
cgagcacagaggagcaaagacataaagattgaggaggaggcaagcaatttcatctcgcag
atcatcaactcgcaaagagggattgagagtagcatcaaccagatcaaggagttccttcgg
gggaatgcattgagcaaggagctagcgtcccgaatattttctgcgttgcttgagaattac
ggatcgctgtacaagctgccgaattctgatcttattgcattgctgtatggaggcctgata
aaagaaggggtgtttccgaagccttaccaaaggatggccattgagtacataaagggatcg
ctgaaatatcctgagaacgacagggagtactcgtttgggttccggtgcctggaggtgttt
ctgccatcttacccatcgatcctgcctgagattgaggagatagaaagtgtcaacaacatc
cttgtgaagaaggagttgattcttgtagattcgagcactcatccgatgctggagctggag
gatatggcaaagctgatatttaaatgtgacagcaagaatgagaggattggggaaataatc
aaaaccctgggttctgaagcggaaaatgatgggcacaggctttctgatgcaatctcaagg
agccttgtggagaaggaagaggtaatactgtacatcatccagaatgtcttgttggaagac
tgtagaagactcatactggccgtagaaagcctggggaatgacttctacctaaagtttgtt
cggaagtctcttgaattccttaagatgtttttagactacagaaacaggagcgagaaccag
attgctaagaacctagggttcatactcggaggggtgatgcttgccaagaacaggattgta
acgtctgagcagtttgacttcaagaagtttgttgtgaaatctgttgagtgcagaaggatt
ttgtttggagtgaagtttatatcaagctttttgaagcagggaaagcacggaattgtgttt
attccaaataacccatggatgatgagtattttgagtcttctgtctgagatctatagctgc
accccaaaggctgtaagggacgagatccaagggctgtttgactacttttcggttgacctt
gtcccaagaccgttcaagagccttggactgaagtccaagaagtatttagcagagtacgta
attgaagacggagatcttgtagtcaggcatgtgatatctcttgcattggatctaagcgtg
agggagatatgcggggcgattgtagagaaggcctgttctgttgcaatacagactggaatg
gttctcttcagaacgatgtgtgtcgaaaagggaatggagtatgtcctttttaggaacatg
gtggtgaatctcacgaaattcctctgcctagtgtctgctcaggagccgattaaggcatgc
atttctgggaatgtctcatacttcatgaagctctgctcactggacttctcgactgaaagg
gtgttcaaagtggctctggagaaccaagcggtttgctgcgagctcatccagagggctggg
gtgtcgaaggtcagcgaatctatcagcggatgctacagcagcctggagtaccggaatgga
gatgcaggtgatgtaaggctttctcttcttgaggatcctgggcacattgagaaggtggcg
atcaagcctgttgacagtggcgagtatcaggagataaaggcacatcttgggcaactgagc
aagaagattccatactcgaagaagaacattgtggctgatgagtggcgtgggcttctaaat
gaaggaaaggagcaggtgttcaagagaatactggagagtgtggaaaacaacgaggacaag
gacgaggagtgcatccggctatgcaggtacatcacagggcatctcatcaagagtggaagt
aaagaggactttctatttgaatgtatggaaaagatatttaagatatcattcaaaacacaa
aaggaggttctaggatggcttatttattccaacgatccgcggaagtttagtgtcagcctt
gtcagtaagtttatagaacacaatctcatcaacgtagtagaatacgaccaggctctttcg
aagatctcacttggagatgggaatctcgacttcgtaatagcactcttgacgtctctgata
acaaccgaggtccagatatgcactgtgtatgactttatttgcactctcgagatgcttgca
ggacacagcgacaaccccaaggttttcgactttttccaaaagatcagtaacctgatgatg
catatagaggcgaagggggtgtctgagtacgacgagtatgtccggaactgcagattcacg
acggttcccgagatgttccttcccgagttcatggagagagcaaactaccctgagtcgcta
gacatccggtctgcctttaaggtgtcttgggatcacttcataagataccaccggatcccc
actgcatactgctacttgaaggtggaccctcttccaaacctcatcaaggacaagctctac
gagtcgataaaggacagcctctttgtgtttctggaggcgtacaggaaaaggaactacctg
ttcttcaagctctatgcaaggtttattgtcaagatactggatgtgattgaggacacgcca
accaacagatccttggtgttctctgtgctagaagttctgtctccatccagggttcctgga
ttctcatcctgtttcttagagatcctgagtcacaaatttgtcttaaaatactttgactct
gaggaaggtgttgttcttgctgcagagacactgaggtgtggcttctatagcccgaagttc
atgtatccgatcacgcagatcatgcaggtactcaaaagaaatcccacatatgtcaggatg
tactcttcgtacctggcctattgctgtcctcaggagtacccccacataaagaacttcatt
aaccagaccagagataggattgtgcctgtggagggccagaactcattcttcaggctccga
acagccctccagaacaggacgtctgtaaaagtaaccgaccttgggataggaaagaatctt
tgggtgtacctgatagacaaccttaacgagacagacaccatctcgtctacggtgattgag
agcatcaagttcatgatagaaaggaaaatgcatctcgaggagatcctgacgatgctctgg
attaggatgaaagcaggcggggcgcccaaggcactagcagcttgttatgatgagatttcc
tcttttgatttttgccgtgtatttctgaagtctcttgagagtcatagttataataaactg
tag
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