KEGG   Emiliania huxleyi: EMIHUDRAFT_430670
Entry
EMIHUDRAFT_430670 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ehx  Emiliania huxleyi
Pathway
ehx03020  RNA polymerase
ehx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EMIHUDRAFT_430670
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMIHUDRAFT_430670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehx03021]
    EMIHUDRAFT_430670
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_430670
Transcription machinery [BR:ehx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     EMIHUDRAFT_430670
  RNA polymerase III system
   RNA polymerase III
     EMIHUDRAFT_430670
  RNA polymerase I system
   RNA polymerase I
     EMIHUDRAFT_430670
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EMIHUDRAFT_430670
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 17265813
NCBI-ProteinID: XP_005772698
JGI: Emihu1_430670
UniProt: R1EHD1
LinkDB
Position
Unknown
AA seq 208 aa
MSDTVYRLYRVRRTIHQMLRDRHYMIDQSDIDMSEEDFARSYTGEREGLTIQAQRRDDPT
DQIFVFWPTDPKVGVKPIKRYMDRMNEDDVKRAILVVQQSLTAFAKQAIVEICAQEGTIL
EQFQEAELLVNITEHVLVPMHVVLSREEKQTLLKRPARPAVALASRPALPPQVSDPVARY
YGLQRGQVVKIVRPSETAGKYVTYRLVF
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcggacaccgtctatcggctgtaccgtgtccggcgcacaatccaccagatgcttcgc
gaccgccattacatgatcgaccagtccgacattgacatgagcgaggaggattttgcgcgg
tcgtatacgggcgagcgcgaggggctgaccatccaggcgcagcggcgggacgacccgacc
gaccagatctttgtcttctggccgacggacccgaaggttggcgtcaagccaattaagcgg
tatatggatcggatgaacgaggacgacgtgaaacgggccatcctcgtcgtgcagcagagc
ctgacggccttcgccaagcaggcgatcgtcgagatctgcgcgcaggaggggacgatcctc
gagcagttccaggaggcggagctgctggtcaacatcacggagcacgtgctggtgccgatg
cacgtggtgctctcgcgcgaggagaagcagaccctcctcaagaggcccgcccggcccgcc
gtcgcgctcgcctcacggccagccctgcccccccaggtctcggacccggtcgcccgctac
tatggcctgcagcgcgggcaagtagtcaagatcgtgcggccgagtgagactgcaggcaag
tacgtcacctacaggctagtcttttag

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