Emiliania huxleyi: EMIHUDRAFT_470734
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Entry
EMIHUDRAFT_470734 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_470734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_470734
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EMIHUDRAFT_470734
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EMIHUDRAFT_470734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
ARM_Cnot1
TFIIA
NOT1_connector
FAZ1_cons
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
17259505
NCBI-ProteinID:
XP_005765784
JGI:
Emihu1_470734
UniProt:
A0A0D3IQ20
R1DFP5
LinkDB
All DBs
Position
Unknown
AA seq
2692 aa
AA seq
DB search
MGEVLGYGSVVFAQIRWLISNLNRKNQKATVSELHNLLGAYGESAFAFTVRCLVEEVDFR
AAAQAALKVQLLAQEFAKLVTRPNATSLIGDAIGGASLAAAAPLTEEWLALFAKAVRATV
AQQLALGLAIAQLSDEEKAAEGDKFLRARLAELTRAAAGALPDALAHALLYFLGDPADKA
RAALVRLLQAVHPEENAPLTLLPLLYSGVGGEQAAAAADPSDLDSRLSYQDGRGPPPSDA
VPALAADATELAELMRDLGYSCCASRAAVVELVSQLTGADGALPGAEGSVAAAICMMAST
AASLDDSLSLHGPFSTAVSGKYLEFDAKFDEDSAADAQALTAWGVEAFVGGVSEALPSLR
WGGVFEALDQPTWAANGPGADGFALLVALHRRACSGPLPAGALLGGWTHSGAQLRLLAHA
VGAAADAVAWGDAAAPLVSPAPDGTSKPGIAPWLSLRLTESLLHLSASGYHAEARALFAA
PLSAAPQLLLAALLTHSGARAGAADEAPLQRELLDGLFPLFLGGDSPGSAALLQRLWEAQ
PYAVMRGMAALHRAQPQSILRLLDLATSFNALEKVLTLGAYSFTIDLAACAQRKELIDFE
PWLHSCLRRDPEHAFVRACASYLREKLLPGSATNLARAAATSNVNVLSVDAAAIIFRVLT
SLTPTLPPTLAADLHDLHTQCVHAKPKLGALLAGSGGAAASASDSKPPGIGLGAANPAAP
SAAADGAAENGAPASEATVTLSLAYESAVASRAAFDAAFRQDVAASLGVGESAVAVIAVS
AGSTVVDFSAAGAGDVAGRLRDSGFTTPHLTRFNGGAPVAATAITSRGAGGAPSAAAPAP
ADAGSLDFGPGMSLPAGLTDEPAAGAPAGGAAAGAPLPGMPGGEATSFPPEIEEIANSYF
QKIYSDAASIDEIIGVLKAFQAAPAQSREQKVYVCMVHNLFDEYKYFPKYPDKPLRTTAV
LFGALVQHGLVSHITLGLFLRYVLEALKKPPLSKMSKFGITALEQFKPRLAEWPQYCQLL
LAIPQLPQLAPELPLFLEAQLAATGAVASAPPPLADPSPAAALGTPVDVSGPPVAEVAPA
PGALAGLAGALGLGAAPAASAPASALPAALQPGAGAAAPQSALQVNSPVFGPASGTPPAP
AAAAAAELPAVSMGSLGVGGFGREGCIETLMSSTSSAEVAPPPDAVQDRIGFVLNNMGQG
NLPAKAAELMEAIESHDSSVPWFANYLVVRRVALEPNFHTLYAAMLHELSLPPLYRAILE
ATLQNARVLLSSQKIRSSSSERSLLKNLGSWLGSITLGRNKPLLMKDIDLKELVCDAYEN
GRLIAVVPFVAKVLDACSTSRVFLPPNPWVPDLKLNLKFEIEVLAKTLKVELADISPTRT
LCHRQQDRAQTCDFANRAGPAALNAPGGGGFGGFSGSAPAFSLPGTDGPLPSAPAAFGSQ
LQPQGLQQPPPPPPPQPGMGGFGAAPSAAAQYSGPPGFFQQQQAQQQAQQAQQQAQAQQQ
QAAAGAQQQAAAQAAQQQAQQQQQAQAQQQQQQALGAQGGGAAALAALGAAADADTVIPN
LASYVQINPALFSQQPQLKRVVPLALDRAIREIISPVVERSVTISCVTTRELMLKDFAME
PDEMRMRKAAQLMVSNLAGSLALVTCKEPLRVACSNHMRALLQQAGSLDVQLMEQLVQVC
SSDNLDLGCTLIEKAATEKAVRDVEEALAPAFAIRRKHREQTGLPYYDMSIFTSGRYPTG
LPEALRPKPGGLLPTQRRVYEDFGRIPRGVAAAAPPPQQQAGIPGIGAAATGPAQPPQPP
QPPQGAAGQFGGLGGLSGDGGGGGSGGALALGRAPQASGAGSLPGLGSAAAGMPPGFPAA
GAQHGVGMLPGSAPAQAGGGVGGAASGALSQAEALERLSLILAQLDLHVSQLAPQGVGMG
ALPASHEVHALLARVAECVTYCASRDEVALAMAGNVFKRMYEQAANAGAAARLATQINVS
VLARVGSACKKVSAFVADMLLYAGDDERKLHEEIVLSLLLAQVVAMTTLSPRLAKHLTTS
RSPHAVAFSAWLVRRTMLDEPLVAATDAKELLGALAALAQQPNPPEGLLRLLDDLRTALA
QGGAQGGRLPKPPPPAAAAAAPAAAAPPPAAAAAAPRRLPPAEPPDAALSHAREQLAPLW
AEWLSLCGQQGANERGFVSQLQAAGWLRQDEQGERFLRVTTELAIAAAHADGSADGGTRL
PLAFGPLDAYSKLVVLILKSLTPEPTPSGARDTTPAATAATARAQLAALVRVLSAVVAHL
ARSHAHHACGARQHEPRAGLLTSFVDDSVCVRLGAHHHEPPPGAPPTPPFNQRAYLRLFG
NWLLELAAPDPALDTLQPQMLYAFAAAFEALRPSRVPGFAFAWLELVSHRSFMPKLLLAP
GRKGWPRLQKLLGHLFSFLYPNLTAPRLSPPTKHLYRGALRVLLVLLHDFPEFLCDYHLA
LCDAIPHTCVQLRNLVLSAFPRHMMLPDPFTPNLKVDLLPESSQPPTVLSPYTAALSAAG
ILEPLDAFLKGRGPRSLLQDLRQRLVGPDGAHRVAAIHALVLRVGVLSFLAGELGPEGRY
LLLNGLANQLRYPNNHTHYFSCVLLYLFSEARDEPLQEQITRVLVERLIVHRPHPWGLLI
TFIELIKNPRYEFWAKNFTRCAPEIERLFESVARSCMAGAAPTPGGSSEAVA
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggtactgggctacggctcggttgtgttcgcgcagatccggtggctcatctcc
aacctcaaccgcaagaaccagaaggccaccgtctcagagctgcacaatcttctcggcgcg
tacggcgagtcagcgtttgccttcaccgtgcgctgcctggtggaggaggtggactttcgc
gccgccgcgcaggcggcgctcaaggtccagctgctcgcgcaagagttcgccaagctcgtc
acgcggcccaacgccacgtccctcatcggcgacgcgattggcggcgcctctctggccgcg
gccgcacccctcactgaggagtggctcgccctcttcgccaaggcggtacgcgcgacggtg
gcgcagcagctggcgctggggctcgccatcgcgcagctctccgacgaggagaaggccgcc
gagggcgacaagttcctgcgcgcgcgcctggcggagctcacccgcgccgcggccggcgcg
ctgcccgacgcgctcgcgcacgcgctgctctacttcctcggcgacccggcggacaaggcg
cgcgcggcgctggtcaggctcctccaggccgtgcaccccgaggagaacgcgccgctgacg
ctgctgccgctgctctacagcggcgtgggcggcgagcaggcggcggcggcggcagaccct
tccgacttggactcgcggctgtcctaccaggacgggcgcgggccgccgccgtccgacgcg
gtgccggcgctggcggcggacgcgaccgagctcgccgagctgatgcgcgatttgggctac
tcgtgctgcgcctcgcgcgccgccgtcgtcgagctcgtctcgcagctgacgggcgcggac
ggcgcgctgcccggcgcagaggggtctgtcgcggcggccatctgcatgatggcgtcgacg
gcggcgtcgctcgacgactcgctctcgctgcacggccccttctccacagccgtctcgggc
aagtacctcgagttcgacgccaagttcgacgaggacagcgccgccgacgcgcaggcgctc
acggcgtggggcgtcgaggcgtttgtcggcggcgttagcgaggcactgccgtcgctgcgg
tggggcggcgtcttcgaggcgctcgaccagccgacgtgggccgccaatgggcccggcgcg
gacggcttcgcgctgctcgtcgcgctgcaccgccgcgcgtgcagcggaccgctccccgcc
ggagcgctgctcggcggctggacgcactcgggcgcgcagctgcggctgctcgcgcacgcg
gtcggcgcggccgccgacgcggtcgcgtggggcgacgccgccgcgccgctggtctcgccc
gcgcccgacgggacgagcaagcccggcatcgcgccgtggctctcgctccggctgaccgag
tcgctgctccacctctcggcgtccggctaccacgccgaggcgcgcgcgctcttcgcggcg
ccgctctccgcggcgccgcagctgctgctcgcggcgctgctgacgcacagcggcgcgcgc
gcgggcgcggcggacgaggcgccgctgcagcgggagctgctcgacggcctcttcccgctc
ttcctcggcggcgactcgcccgggtcggccgcgctgctgcagcggctgtgggaggcgcaa
ccatacgcggtgatgcgcgggatggcggcgctgcaccgcgcgcagccgcagtccatcctg
cggctgctcgacctggcgacgtccttcaacgcgctcgagaaggttctcacgctcggcgca
tactcgttcaccatcgacctcgccgcgtgcgcgcagcgcaaggagctcatcgacttcgag
ccgtggctgcactcgtgcctgcgccgcgacccggagcacgcctttgtgcgcgcctgcgcg
tcgtaccttcgcgagaagctgctgcccggctcggcgacgaacctcgcgcgcgcggcggcc
acgtccaatgtgaacgtcctctccgtcgatgccgccgccatcatcttccgcgtcctcact
tcgctgacgccgacgctgccgcccacgctcgccgccgacctgcacgacttgcacacgcag
tgcgtgcacgcaaagccaaagctaggcgcgctcctggcgggcagcggcggcgccgccgca
tctgcgtccgacagcaagccgccggggatcggcctcggcgcggccaaccccgccgcgccc
tctgcggccgctgacggcgcggccgagaacggtgcgccggcgagcgaggcgaccgtgacg
ctcagcctcgcttacgagtccgccgtcgcgtcgcgcgccgcgtttgacgccgccttccgg
caggacgtggcggcgtcgctcggcgtgggcgagagcgcggtcgccgtcatcgccgtctcg
gccggttccaccgtcgtcgacttcagcgccgccggcgccggcgacgtggcgggcaggctg
cgcgacagcggcttcacgacgccgcatctcacccgcttcaacggcggcgcgcccgtcgcc
gccacggcgatcacgagccgcggcgccggcggcgcgccgtcggccgcggcgcccgccccc
gccgacgcgggatcgctcgacttcgggccgggcatgtcgctgccggcggggctgacggac
gagcccgccgcgggcgcgcccgcgggcggcgccgctgcgggcgcgccgctccccggcatg
ccgggcggcgaggcgacgagcttcccgcccgagatcgaggagattgcaaactcttacttc
caaaagatctactcggacgccgcctcgatcgacgagatcatcggcgtgctcaaggccttc
caggcggcgcccgcgcagtcgcgcgagcaaaaggtgtacgtgtgcatggtgcacaacctg
tttgacgagtacaagtacttcccaaagtacccggacaagccgctccgcaccacggcggtg
ctcttcggcgccctcgtgcagcacggcctcgtctcgcacatcacgctcggcctcttcttg
cgctacgtgctcgaggcgctcaagaagccgccgctctcaaagatgtccaagtttggcatc
accgcgctcgagcagttcaagccgcgcctcgccgagtggccgcagtactgccagctcctc
ctcgccatcccgcagctgccgcaactcgcccccgagctgcctctcttcctcgaggcgcag
ctcgccgccaccggcgccgtggcgagcgcgccgccgccgctcgccgacccctcgcccgcc
gctgcgctcggcacgcctgtcgacgtgtcgggcccgcccgtggccgaggtcgcgcccgcg
cccggcgcgctcgccggcctcgccggcgcgctcgggctcggcgccgcccccgccgcgtcc
gcgccggcgtcggcgctccccgccgcgctgcagcccggcgcgggcgctgcggcgccgcag
tcggcgctgcaggtcaacagccccgtcttcgggcccgcgtcggggaccccgcccgccccg
gcggcggcggcggcggcggagcttccggcggtatcgatgggatcgctaggcgtcggcggc
ttcgggcgcgagggctgcatcgagacgctcatgtcctcgaccagctcagcagaggttgcg
cctccgccggacgcggtgcaggaccggatcggcttcgtgctcaacaacatggggcagggc
aacctgcccgcaaaggcggcggagctgatggaggcgatcgagtcgcacgacagctccgtg
ccgtggttcgcaaactacctcgtcgtgcggcgggtggcgctcgagccaaacttccacact
ttgtacgccgcgatgctgcacgagctgtcgttgccgccgctctaccgcgccatcctcgag
gcgacgctgcagaacgcgcgcgtgctgctctcgtcgcagaagatccgctcgagctcgtcc
gagcgctccctgctcaagaacctcggttcgtggctcggctccatcacgctcggccgcaac
aagccgctgctgatgaaggacatcgacctgaaggagctcgtctgcgacgcatacgagaat
gggcggctgatcgcggtggtccctttcgtcgccaaggtgctcgacgcgtgctccacgtcg
cgcgtcttcctgccgcccaacccgtgggtgcccgacctcaagctcaatctcaagttcgag
atcgaggtgctcgcgaagacgctaaaggtcgagctcgccgacatctcgccgacgcgcacg
ctctgccaccggcagcaggaccgcgcgcagacttgcgactttgccaaccgcgccggcccc
gccgcgctcaacgccccgggcggcggcggcttcggcggcttctccggctcggcgcccgcc
ttctcgctgcccggcacggacggccccctcccgtcggcgcccgccgcgtttggctcgcag
ctgcagccgcaggggctgcagcagccgccgccgccgccgccgccgcagcccggcatgggc
ggcttcggcgcagcgccatcggcggccgcgcagtacagcggcccgcccggcttcttccag
cagcagcaagcgcagcagcaggcgcagcaggcgcagcagcaggcgcaggcgcagcagcag
caggcggctgccggggcgcagcagcaggccgcggcccaggcggcccagcagcaggcgcag
cagcagcagcaagctcaggcgcagcagcagcagcagcaagcgctcggtgcgcagggaggc
ggcgccgcggcgctcgcggcgctcggtgcggcggctgacgcggacaccgtcattccgaat
ttggcgtcctacgtgcagatcaaccccgcgctcttctcgcagcagccgcagctcaagcgg
gtggtgccgctcgctctcgaccgcgctatccgcgagatcatttcgcccgtcgtcgagcgt
tccgtcaccatttcgtgcgtgacgacgcgcgagctgatgctcaaggactttgcgatggag
cccgacgagatgcggatgcgcaaggcggcgcagctgatggtgtccaacctggcgggctcg
ctcgccctcgtcacgtgcaaggaaccgttgcgcgtcgcttgctccaaccacatgcgcgca
ttgctgcagcaggcgggctctctggacgtgcagctgatggagcagctggtgcaggtctgc
tcgtcggacaatctcgacctcggctgcacgctgatcgagaaggcggcgaccgaaaaggcg
gtgcgcgacgtcgaggaggccctcgcgcccgccttcgccatccggcgcaagcaccgcgag
cagaccggcctgccctactacgacatgtccattttcacgtcgggccgctacccgaccggg
ctgcccgaggcgctccgcccaaagccgggcgggctcctgccgacgcagcggcgcgtctac
gaggactttgggcgcatcccgcgcggcgtggcggcggcggcgcccccgccgcagcagcag
gcgggcatccccggcatcggagcggcggccaccgggcccgcgcagccaccgcagccgccg
cagccgccgcagggcgccgccggccagtttggcgggctgggcgggctgagcggtgacggc
ggcggcggcggcagcggcggcgcgctcgcgctcggccgcgcgccgcaggccagtggcgcc
ggctcgctgcccggtctcggcagcgcggccgccggcatgccgcccggtttccccgccgcc
ggcgcgcagcacggggtgggcatgcttccgggcagcgcgccggcgcaggcgggcggcggc
gtcggcggcgcggcgagcggcgcgctttcgcaggccgaggcgctcgagcggctctcgctc
attctggcgcagctcgacttgcacgtcagccagctggcaccgcagggcgtcgggatgggg
gcgctgcccgccagccatgaggtgcacgcgctgctcgcgcgggtggccgagtgcgtcacg
tattgtgcctctcgcgacgaggttgccctcgcgatggcgggcaacgtcttcaagcgcatg
tacgagcaggcggccaacgcgggcgccgcggcgcggctcgccacgcagatcaacgtgtcg
gtgctcgcgcgcgtcggctccgcctgcaaaaaggtgtccgcctttgtggctgacatgctc
ctgtacgccggcgacgacgagcgcaagctacatgaggagatcgtgctctcgctcctcctc
gcgcaggtggtcgcgatgaccaccctctcgccgcgcctcgccaagcacctcaccacctcg
cgctcgccgcacgcggtcgccttcagcgcgtggctggtgcggcgcacgatgctcgacgag
ccgctcgtcgcggcgaccgacgccaaggagctgttgggcgcgctcgccgccctcgcgcag
cagccgaacccgcccgagggcctgctgcgcctgctcgatgacctccgcaccgcgctcgcg
caaggcggcgcgcagggcgggcggctgcccaagccgccgccgcccgccgccgccgccgcc
gcgcccgccgccgccgcgccgccgcccgccgcggcagcggccgctccgcgccggcttccc
cccgcggagccaccggacgccgcgctctcacacgcgcgcgagcagctcgcgccgctctgg
gcagagtggctctcgctgtgcggccagcagggcgccaacgagcgcggcttcgtctcgcag
ctgcaggcggcgggctggctgcggcaggacgagcagggggagcgtttcctgcgtgtgacg
acggagctcgcgatcgccgccgcgcacgccgacggctcggccgacggcggcacgcggttg
ccgctcgcgttcgggccactcgacgcctactcgaagttggtcgtgctcatcctcaagtcg
ctgacgcccgagccgacgccgtcgggcgcgcgcgacacgacccccgcggcgacggctgcc
acggcgcgcgcgcagctggcggcgctcgtgcgcgtgctctccgctgtcgtcgcgcacctc
gcacgctcgcacgcgcaccacgcttgcggcgcgcgccagcacgagccgcgagcaggcttg
ctgacttcattcgtggatgactcggtgtgcgtccgtctaggtgcccaccatcacgagcct
ccgcccggcgctccgccgacgccgcccttcaaccagcgcgcgtacttgcgcctctttggc
aactggctgcttgagctggcggcgcccgacccggcgctcgacacgcttcagccacaaatg
ctctacgctttcgccgccgccttcgaggcgctccgcccgtcccgcgtccccggtttcgct
tttgcgtggctcgagctcgtctcgcaccgctccttcatgccaaagctgctgctcgcgccg
gggcgcaaggggtggccgcggctgcagaagctgctcgggcacctcttctccttcctctac
cccaacctcaccgcgccgcgcctctccccgcccacgaagcacttgtaccgcggcgcgttg
cgcgtgctgctcgtgctgctgcacgatttccccgagtttctgtgcgactaccacctcgcg
ttgtgcgacgccatcccgcacacttgcgtgcagttgcgcaacctcgtcctgtccgccttc
ccgcgccacatgatgctgcctgaccccttcacgcccaacctcaaggtcgacctcctcccc
gagtcgtcgcagccgcccaccgtcctctcgccctacacggccgccctctccgccgccggc
atcctcgagccgctcgacgctttcctcaaggggcgcgggccgcgatcgctgctgcaggac
ttgcgtcagcgccttgtcgggccggacggcgcccaccgcgtcgccgcgatccacgcgctc
gtgctgcgcgtcggcgtgctctcgttcctggcgggcgagctcggccctgaggggcggtac
ttgctcctcaacgggttggccaaccagctgcgctacccgaacaaccacacgcactacttc
tcgtgcgtcctcctctacctgttctcggaggcgcgcgacgagccgctgcaggagcagatc
acgcgcgtcctcgttgagcggctgatcgtgcaccggccgcacccgtgggggctgctcatc
accttcatcgagctcatcaagaacccgcggtacgagttttgggcaaagaactttacgcgc
tgcgctcccgagatcgagcggctcttcgagtcggtcgcgcgctcgtgcatggcgggcgcg
gcgcccaccccgggcggctcgtccgaggcggtggcctag
DBGET
integrated database retrieval system
