Embiotoca jacksoni (black perch): 138194816
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Entry
138194816 CDS
T10523
Name
(RefSeq) collagen alpha-6(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04510
Focal adhesion
eja04512
ECM-receptor interaction
eja04518
Integrin signaling
eja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138194816
04518 Integrin signaling
138194816
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138194816
09142 Cell motility
04820 Cytoskeleton in muscle cells
138194816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eja04147
]
138194816
00536 Glycosaminoglycan binding proteins [BR:
eja00536
]
138194816
Exosome [BR:
eja04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138194816
Glycosaminoglycan binding proteins [BR:
eja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138194816
Hyaluronan
Extracellular matrix or blood plasma proteins
138194816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
VWA_CoxE
vWA_SIBA-E
DUF1194
HLH
Motif
Other DBs
NCBI-GeneID:
138194816
NCBI-ProteinID:
XP_068999906
LinkDB
All DBs
Position
Unknown
AA seq
2472 aa
AA seq
DB search
MEGRAGLLFSLVAACFCCTAAQIAECQDATEGDIVFLVDGSSRIGESFQNVRSFVRGIIG
GLDIGSDRVRVGLAQYSDDPHLEFLLKDHMDKASLLREVERISHRKGGKQTGEALDFLRE
QVFTEESGSRAVERKPQFAVIISTGDFSDEDVEAAQRLRRHGVMVFGIGVGQVNQDKLSA
IVNKPLQRFLLTTNSYQSLPEMTDRLLQALCTTMKAQMSALTSRFTDVFFLVDSNTVPKQ
FNIFRTELVNLITQLDVRASTYRVGLAQYSQDVKVEFLLNAHQTKQETLNAVKRFRLRRQ
PNQRGNLARALQSANNFFSEEAGGRAELGTKQMLVIVSGEISPDRMSHWANDLKSAGVTI
VGMNGLLPGFGSSSGDGTFRKVIHDHLDHFTSPNMTFDSPRVTQLKDVITTQEEVQVSQD
CRGANVADVVFIVESGSIGPAHFQLVRTFLYLIVGGLEVSRARVRVGIVTCSDKPIAEVH
LSTFSDKAEILQFINMLPYREGQTYIGAALNFTKAEMFQERLGSRAFVQKVAVVITDGRS
NDDVSEAAIALRRDGVTVYAIGIKEGDTTQLQKIASFPPYSYVFNVTSFTRLRPLRTVLQ
KSLCNNIIYQMITNVETTKYVKEACKHQDEADIFFLIDDSGSISHADFSDMKNFIIGFLK
NFHIGQQHVRIGLVKYSDAPTLEFDLTEYSDARNVEKAVKAIRHVGGGTNTGKALLYMER
YFKTRNVPEYLIVITDGKSADAVKSHAENLRRQQINIYAIGVFNSSQAELEEISGDSMRT
FSVSNFEALKSISNNIVTEICSSEACEDVPSDIFFLTASSESITDIDYQKMKDFIKSVIS
KSVIGENQVKVGVMQFSTESRLEFDLNKYNRKEDIMQAIDRMTQMNQGTRSVLGIQDVSK
YFDADRGGRPHLKQRLVLITDGNIKGNVALHAAALRAKNVEIYTVGLKDAGTKQLQEISH
SVDQVFTLRNFDELKSLVPKLALKFCKKDCEKIDKADIIFLVDGSKSIDEKEFESIRTFM
VSIVNQTTVGKELTRFGIILYSNQSESKFALKDCTSRRAVLQAIKDLLSPKSITNTGNAM
AYSVDFFTAKNGGRRELKVPQILMVITDGDATDSDKLKPSSDELRSNQITVFSIGVDEAR
TDQLHIMAAGDTSKVFYVKEFEKLETLYKNISSILCNKTKPACDRTDLVFLLDQSSNISP
AEHGAVTRFTVDLVNSFKVGEEFVRVGLAQFSTDFQHEFYLNMYYNAEDAIKHIDSLGRR
GGETNIGQALYHMRTYFQKSVGSRSNLPRNLLLITRGNSQDDVKDEADRLRAMGVQIIVI
IVGEVYDLQLLQITGTADKLIPVYNVDRFQNIKQLVIDSICYVPDKPSKDCSIDIAVGFD
ITERSGGIGKLLSSSHLMLQNHLEEIIYYASSLKDVCCTSAGPIQTRVAFHLVDRNGASL
YDAGFESYSTEVVGKVLTWPLSQPTYFNSAMLKFFMDRFRAASTASVKVLLIFSDGLDEK
QLQLKRTSELLEQSGVNALLTVALEDTDPSPLQVVEFGRGLEYQRPLTIGMPSIGSTVLQ
QITNVADQKCCNVLCKCSGAKGHRGDPGKPGIKGLLGRPGQPGFPGDEGPMGDRGLPGQT
GPQGFQGCPGTRGLKGHRGASGNRGDDGGEGIDGVDGQQGDTGRDGLKGDRGHTGDTGLT
GIKGDVGPKGERGLSGDPGEPGTINAKRGPKGDPGNPGRPGEPGPKGKPSVAGDIGNPGP
DGRRGLSGVKGAPGEGGADGLRGLPGASGPQGSRGISGEKGIKGTPGFTGPQGGPGIGGE
RGAAGRPGFNGQKGQLGDPGVKGAPGSRGPRGMTGQDGRDGSGLVGRKGGKGDPGFPGHP
GLPGEDGLSGAKGRPGRKGNRGRGGKSGMPGVKGGKGGTGRPGLKGLKGARGVSTPVCEL
ITVVRDNCDCCQGQILCPVLPTELVFGLDMSEDVTSDAFETQRSALLSLLDDLRVAESNC
PTGARVAVVAYSAYTKYLIRFQDYRRKNQLIEAVKNIALERTSNRRHLGAAMRFVGQYIF
KRVRSGLRIRKVAVFFSNGPSQDVDDIVTAMMEYRGLDIVPAVVSLRNAPAVSRAMEVDD
SGRSVFTVLGRQPDWAEDLRRIKNCAICYDPCRPSQDCSFIQEPLQPQQAEVDLVMVLDG
SREMRADEYAGAQRLLGSVVEQLVVSPQPRRADNRARVAVVQQGSAQTAKMEFDLQTYQN
RQRMKTHLTKNMQQQSGPSALGQTLDFTLKEVLLKAGQPRRRRALLTVVAAQTAWHDRAK
LHYISQKAKCEGVALFVVTVGDRYNRTQVEELASPPVEQHLIHFSRLKADEQRYAQRFFR
VFLSALQKGLHSYPPPSIKQTCSELVDPDQGLHGPGSGMLNDEFNDEFNDEFNDKPVAHQ
LTSGGQSSLSGADLNDACLLGVHGGGCQNYTIMWFFDHKTGSCDRFWYGGCDGNENRFKT
QEDCENVCVTKI
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagagcaggtcttctcttcagcctcgtcgcagcgtgtttctgctgcaccgct
gctcagatcgcagagtgccaagacgccactgagggcgacatcgtcttccttgtcgatggc
tcctcccggatcggtgaaagctttcagaacgtccgctcgtttgtcagaggcatcatcggg
ggcctcgacatcggcagcgaccgagtccgggtcggcctggctcagtacagcgacgatcct
cacctggagttcctgctgaaggaccacatggacaaggcatcactgctgagagaagtggag
agaatttctcaccgaaaaggtggcaagcaaacgggcgaggccctcgacttcctccgggaa
caggtcttcacagaggagtccgggagccgagccgttgagcggaagcctcagtttgccgtg
atcatctctactggggacttctccgatgaagacgtagaagcggcccagcggctgaggagg
cacggcgtcatggtgtttggtatcggggtgggacaggtcaaccaggacaaactgagcgcc
atcgttaacaagccgctgcagcgcttcctcctcaccaccaacagctaccaatctctgccg
gagatgacggaccgtctgctgcaagctctgtgcaccaccatgaaggctcagatgagcgct
ttaaccagcaggtttacagatgttttcttcctggtggacagcaacacagttccaaagcag
ttcaacatcttcaggaccgagctcgtcaacctgatcactcagctcgacgtcagagcgtct
acctaccgtgttggactggctcagtacagtcaagacgtcaaggtcgaattccttcttaat
gctcatcaaaccaaacaggagaccctgaacgctgtaaaacgcttccgtctgcgccgacaa
cccaaccaacggggaaacctagcacgcgctctgcagtccgccaacaacttcttcagcgag
gaggcgggcggccgagcagaacttggcaccaaacagatgctggtcattgtgagcggcgaa
atatcacccgatcgcatgtctcattgggcgaatgacctcaaatcagccggggtgactatt
gtggggatgaatggccttttacctggatttggcagttcatctggagacgggacatttcgc
aaagtcatccatgaccatctggaccatttcaccagccctaacatgacatttgattctccc
agagtgactcagctgaaggacgtcatcacaacccaggaagaggttcaagtcagtcaagat
tgcagaggagccaacgtggcagacgtcgtgttcattgttgagtccggcagcatcggacca
gctcacttccagctggtgcgcactttcctgtacttgatcgtcggtggcctggaggtcagt
cgagcgagagtccgagtgggcatcgtgacgtgcagcgacaaacccatagcggaggtccac
ctcagcaccttcagcgacaaggctgaaatcctgcagttcatcaacatgctgccttaccgt
gagggccagacgtacattggagctgccctcaatttcactaaggcagagatgttccaagag
cggctgggcagcagggcgtttgtccagaaggtggcagtggtgatcactgacggtcgttcc
aacgatgatgtgagcgaagcggcgatcgcgctccgtcgtgacggcgtcacagtttacgcc
ataggaatcaaagaaggcgacacaactcagctgcagaagattgcttcgttccctccctac
agctatgttttcaatgtgacaagtttcaccaggctgagacccctgaggacggtcctgcag
aagagcctgtgcaacaacatcatttaccagatgattaccaacgttgagaccacaaaatac
gtcaaagaagcatgtaaacaccaggatgaagctgacatctttttcctgatcgatgactcg
ggaagcatcagtcacgcagacttcagtgacatgaagaacttcataattgggtttcttaaa
aacttccacattgggcaacaacacgttcgcatcgggctggtgaagtactccgatgcgccc
accctagagtttgacctgacggaatactcggatgctcggaatgtggagaaagcagtgaag
gcgataaggcacgtgggaggcgggaccaacacaggaaaagctctgttatacatggaacgt
tattttaagactcgtaatgtcccagagtacctgattgtcatcaccgatggaaaatctgct
gatgcagtcaaaagtcacgcagaaaacttaaggagacagcaaatcaacatctacgccatc
ggggtgttcaattcaagccaggctgagctggaggagatctccggtgactccatgaggact
ttctctgtcagtaactttgaggccctgaagtccatcagcaacaacattgtcacagagatc
tgctcttcagaggcttgcgaagatgtaccgagcgacatatttttcttaactgccagctct
gagagcatcactgacatcgactatcagaaaatgaaagacttcattaaatctgtcatcagc
aagtcggtcattggggagaaccaggtgaaagttggcgtcatgcagttcagcacagaatct
cgtctggagtttgacctcaacaagtacaacagaaaagaggacataatgcaggcgatcgac
cgcatgactcagatgaatcaaggcactcgcagcgtattgggcattcaggatgtctcaaag
tactttgatgcagacagaggaggacgccctcacctgaagcagagattggtactgataaca
gatggtaacatcaaaggtaatgtcgcgctccacgctgcagctctccgggccaagaacgtg
gagatctacactgtgggactgaaggacgccggcaccaagcagctgcaggagatcagccac
tccgtggaccaggtctttactctgagaaactttgacgaactgaagtcactggtgcccaag
ctggccttaaagttctgtaagaaagattgtgagaagatagataaagctgatatcattttc
ctggtggacggctccaaaagtatagatgagaaagagttcgaaagcatacgaacctttatg
gtgtccatagtgaaccagaccaccgtcgggaaggagctgactcgctttgggatcattctc
tactccaaccaatctgagtccaagtttgctctcaaagattgtacctctagaagagccgtt
cttcaagcaataaaagatttgttatcgccaaaaagcataacaaatacaggcaacgccatg
gcctactccgtagacttcttcactgccaagaacggcggccgcagagagctcaaagtgcct
cagattctcatggtgatcacagacggcgacgccaccgactctgataaactgaagccgtca
tctgatgagctgcgttccaaccagatcaccgtcttcagcatcggagtggatgaggcaaga
acagaccagctgcacatcatggccgcaggcgacacgtccaaagtcttctacgtgaaagag
tttgagaaactggaaactctgtacaagaatatttcttctatcctctgcaataagaccaag
ccagcttgtgaccggaccgatttggtctttctgctggatcagtccagcaacatcagccca
gccgaacacggagccgtgacccggttcaccgtggacctggtcaacagctttaaagtcggt
gaagagttcgtgcgtgtcggactcgcacagttcagtaccgactttcagcatgagttttac
ctcaacatgtactacaacgctgaggatgcgatcaagcacatcgacagcctgggacgccgc
ggcggagagaccaacatcggacaagccttgtaccacatgaggacgtacttccagaagtcg
gtcggcagccgcagcaacttacccaggaacctgctgctgatcacacgcggtaactctcag
gatgacgtgaaggatgaagccgaccgcctccgggcgatgggggtccagataatagtcatc
atagttggagaggtctacgacctgcagctcctgcagatcaccggaacggcggacaaacta
atccctgtctacaatgtcgaccgcttccaaaatatcaaacaattggttatcgacagcatc
tgctacgtcccggacaagccctcgaaggactgcagcatcgacatcgccgtaggcttcgac
atcactgagagaagcggaggcatcggcaagctgctgagcagcagccacttgatgctccag
aaccacctggaggagatcatctattacgcctcctcgttgaaagacgtgtgctgcaccagc
gccggaccgatccagaccagggtggccttccacctggtggaccgcaatggagcctcgctg
tacgacgccggcttcgaaagctacagcaccgaggtggtggggaaagtgctgacctggccg
ctgtctcagcccacctacttcaactctgccatgctcaagttcttcatggacaggttcaga
gccgcgtccaccgccagcgtcaaggtgctgctgatcttctcagatggactcgatgaaaag
cagttgcagctgaagcgcacgtcagagctgctggaacagtctggtgtcaacgctctgctg
acggtggcgctggaggacaccgacccctctccgctgcaggtggtggagtttggccgaggg
ctcgagtaccagcgtcctctcaccatcggcatgccgagcatcggcagcaccgtcctccaa
cagattaccaacgtggccgaccagaagtgctgcaacgtcctgtgcaaatgttcaggagcc
aaaggccaccgcggtgatccaggaaaaccggggatcaagggtctgctgggccggccgggt
cagccgggcttcccaggagacgagggaccgatgggcgatcgagggcttccaggacaaacg
ggacctcaaggcttccagggttgtcctggaaccagaggactgaagggccaccgaggcgcc
tctggaaacaggggtgacgacggaggagaggggattgatggagtcgacggacagcaggga
gacacgggaagagacggacttaaaggagacagaggacacacaggagacacaggtctcaca
gggatcaaaggggacgtggggcctaaaggagagcgaggactgagtggagatccgggcgaa
ccaggaaccattaacgccaaacgaggacccaaaggagacccaggaaacccaggacggccg
ggggaacctggaccgaaggggaagccgagtgtagccggagacatcgggaacccgggtccg
gatgggaggcgaggtctgagcggcgtgaagggagctccaggtgagggcggagccgatgga
ctccggggccttccaggtgcttcaggtccacagggaagcagaggaatctccggggagaaa
ggcatcaaaggaacgccgggcttcactggacctcagggtggacctggaataggtggggaa
cgaggagcagcgggacgtcctggattcaacggacagaagggccaactgggagacccggga
gtcaaaggagctccaggttctcggggaccccgagggatgacgggtcaggacggcagagac
ggttctggacttgttggacgcaaaggtggaaagggagatccggggtttcctggtcaccct
ggtctgccgggcgaggacggcctgtcgggagcgaagggacgtccgggacgcaaagggaac
cgcggtcgagggggaaaatcaggcatgccgggagttaaaggcgggaagggaggtacggga
cgtccaggactgaagggtctcaaaggtgctcggggggtttccacgcctgtgtgcgagctg
atcaccgtcgtcagagacaactgtgattgctgccagggtcagatcctgtgccccgtcctc
cccaccgagctcgtcttcggcctggacatgtcggaggacgtgacctcggacgccttcgag
acgcagcgctccgccctcctctccctgctggacgacctccgcgtcgccgagagcaactgt
ccgaccggcgcccgcgtcgccgtggtggcgtacagcgcctacaccaagtacctgatccgc
ttccaggactaccgccgcaagaaccagctgatcgaggccgtgaagaacatcgccctggag
aggacgtccaaccggcgccacctgggggccgccatgcgcttcgtgggtcagtacatattc
aaacgcgtccgatcagggctgcggatcaggaaggtggcggtcttcttctccaacgggcct
tcgcaggacgtcgacgacatcgtgaccgccatgatggagtaccggggcctcgacatcgtc
ccggcagtcgtctctctgaggaacgctcccgctgtcagccgggcgatggaggtggacgac
tcgggccgctccgtcttcacggttctggggaggcagccggactgggccgaggacctccgg
aggatcaagaactgtgcgatctgttacgacccctgcaggccgtcccaggactgctccttc
atccaggagccgctgcagcctcagcaggccgaggtggacctggtgatggttctggacggc
tccagggagatgcgggccgacgagtacgccggcgctcagcggctgctgggctccgtggtg
gagcagctggtcgtgagccctcagccccgccgggccgacaaccgggcccgggtggccgtg
gtccagcagggctccgcccagaccgccaagatggagttcgacctgcagacctaccagaac
cggcagcggatgaagacgcacctgacgaagaacatgcagcagcagagcggcccctcggcg
ctgggacagacgctggacttcaccctgaaggaggttctgctgaaggcgggtcagccgcgc
aggaggagggcgctgctgaccgtggtggccgcccagaccgcctggcacgaccgagccaag
ctgcactacatctcccagaaggccaagtgtgagggggtggcgctgttcgtggtgacggtc
ggcgaccgctacaaccggacgcaggtggaggagctggccagtccgccggtggagcagcac
ctgatccacttcagccggctgaaggccgacgagcagcgctacgcccagcgcttcttcagg
gtcttcctgtcagcccttcaaaagggactccactcgtatcctccaccttcaatcaagcaa
acctgcagcgagctggtggacccggaccaagggttgcatggtccaggctccggcatgctc
aacgacgagttcaacgacgagttcaacgacgagttcaacgacaagccggtagctcatcag
ctgaccagcggcggccagagttcactgtcaggagcagacctcaatgacgcctgcctcctc
ggcgtgcacggcggcggctgccagaactacaccatcatgtggttctttgaccacaaaacg
ggctcgtgcgatcgcttctggtacggtggttgtgacggcaacgaaaaccgcttcaagaca
caggaggactgtgagaacgtgtgtgtgacgaagatctga
DBGET
integrated database retrieval system
