Embiotoca jacksoni (black perch): 138197599
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Entry
138197599 CDS
T10523
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eja04040
]
138197599 (scn1lab)
Ion channels [BR:
eja04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138197599 (scn1lab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
GPHH
ATP-synt_B
PKD_channel
New_glue
YxzE
Motif
Other DBs
NCBI-GeneID:
138197599
NCBI-ProteinID:
XP_069004532
LinkDB
All DBs
Position
Unknown
AA seq
2065 aa
AA seq
DB search
MAQLLVPPGPDSFRPFAPESLAAIERRIAEEAARRPRADRRSDGADDDNGPKPNSDLEAG
KSLPFIYGDTPPHLVSTPLEDLDTFYGNQKTFIVLNRGKAIFRFNATPALYILSPFNPLR
RIAIRVLVHSLFSMLIMFTILTNCSFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVILMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRLPLDGNATAGNGSGGDVAE
ATLLDGGGGGGGLLELNATETFNWTEYISDESNYYYLPGRRDALLCGNGSGAGLCPEGYT
CIKAGRNPDYGYTSFDTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLG
SFYLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAAATESG
EYGGRGCGGGGGGGGPTAGSSSSATSKLSSKSAKERRNRRKKRKQREEEEERGGRDKFHK
SESEDSVKRSSFRFSIDANRLSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRAR
DMGSENDFADDEHSTFEESDSRRGSLFLPRRLERRCSAVSQTSLGAPRIVLPANGKMHCA
VDCNGVVSLVGGTSVTTSPVGLLLPEGTTTDTELKKRRSGFRQPSADYLEEPGGRQRAMS
VASILTNTMEELEESRQKCPPCWYRFANTGLIWDCCPAWLKIKDVVSTVVMDPFVDLAIT
ICIVLNTLFMAMEHYPMTKEFDNVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNVF
DGIIVSLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTL
VLAIIVFIFAVVGMQLFGKSYKECVCKISDDCKLPRWHMHDFFHSFLIVFRVLCGEWIET
MWDCMEVAGQSMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIA
VGRIQRGIAFVKTTVRQSLWSVCCGGGGGSGGGGSVKGSVLAEEIKPLDELHSNGKGNCI
SNHTSVEITKEPGGGVYPTEGNGRPGGGGLVVGGGGPAVDDAAGKYPAEECDYMSFIHNP
SLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLDTEPHHQRLSSSEGSTVDIRPPG
DGVDSVELEPEESLDPEACFTEGCVSRFQCCQIDEEGDEYKSWWTLRKTCFIIVEHNWFE
SFIIFMILLSSGALAFEDVYIEQRRTIKTVLEYADKVFTYIFILEMLLKWVAYGFVKYFT
NAWCWLDFLIVDVSLVSLVANALGYSELTAIKSLRTLRALRPLRALSRFEGMRSKIKNVV
TSSRLSKVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCVNTTSDEIFPV
SVVNNRSDCMSLANESARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLED
QPEYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPTNAFQGCVFDCITKQAFDIVIMILICLNMVTMMVETDDQTPEM
DQILYWINLVFIVLFTGEGVLKMISLRHYYFTIGWNIFDFVVVILSIVGMFLSEVIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREAGIDDMFNFETFGNSMICLFQITTSGGWDGLLAPILNKREPDCDSQTEHPG
NNYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWERFDPGATQFMEYSKLSDFADALDPPLRMPKPNMLQLISMDLPMVSGERIHCLDILF
AFTKRVLGEGGEMDVLRGQMEERFMASNPSKVSYEPITTTLRRKQEEMSATVIQRAFHRY
LMRLAMKKASALYKERLKEGVRDPDKDVMVIGKFPENSISDKTDMTPSTASPPSYNSVTK
SDADKYEKEIRDKENKGKDSKDRKK
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctgcttgtaccgcccggacctgacagcttccgccccttcgcccccgagtcg
ctggccgccatcgagcggcgcatcgccgaggaggcggcccggagaccgcgggcggaccgc
cgcagcgacggcgccgacgacgacaacgggcccaagcccaacagcgacctggaggcgggc
aagtccctgcccttcatctacggggacacgcccccccacctggtgtccacgcctctggag
gacctggacaccttctacggcaatcagaagaccttcatcgtattgaatcgcgggaaggcg
atcttccgtttcaacgccactcctgccttgtacatcctcagccccttcaaccctctgagg
aggatagcgatccgagtcttagtgcactcgctgttcagcatgttgatcatgttcaccatc
ctgaccaactgttcgttcatgaccctcagtaaccccccggactgggccaagaatgtagag
tacacattcacggggatttacaccttcgagtccctcataaagatcctggcccggggcttc
tgcgtggggaagttcactttcctgcgggacccgtggaactggctggatttcagtgtcatc
ctcatggcgtatataacagagtttgtaaacctaggcaatgtttccgctctgcgcacgttc
agagtattgcgagcgttgaaaacgatctcggtcatcccaggcctgaagaccatcgtgggc
gccctcatccagtcggtgaagaagctgtcggacgtgatgatcctcaccgtgttctgcctg
agcgtcttcgccctcatcggcctgcagctcttcatgggcaacctgcggcagaagtgcgtg
cgcctgccgctcgacggcaacgccaccgccggcaacggcagcggcggtgacgtcgccgag
gcgacgcttctcgacggcggcggcggcggcggcggcctgctggagctcaacgccacggag
accttcaactggacggagtacatcagcgacgagagtaattactattacctccccggccgg
cgggacgctctgctctgcgggaacggcagcggcgccggcctctgcccggagggctacacc
tgcatcaaagcgggccgtaacccggactacggctacaccagcttcgacaccttcagctgg
gccttcctgtccctgttccgactcatgacgcaggacttctgggaaaacctctaccagcag
accctgcgcgcggcggggaagccctacatgatcttcttcgtgctggtcatcttcctgggc
tccttctacctggtcaacctcatcctggccgtggtggccatggcctacgacgagcagaac
caggccaccatcgaggaggcccagcagaaggaggaggagttccaggccatgctggagcag
ctgaagaggcagcaggaggaggcgcaggttgccgcggcagcagcagccaccgagagcggg
gagtacggcgggagggggtgcggcggcggcggcggcggcggcggccccaccgccgggtcg
tcgtcctcggcgacgtcgaagctgagctccaagagcgccaaggagcggcgcaaccggagg
aagaagaggaagcagcgggaggaggaggaggagcgggggggccgcgacaagttccacaag
tccgagtccgaggacagcgtcaagaggtccagcttccgcttctccatcgacgccaaccgg
ctgtcttacgagaagagatgctcctcgcccaaccagtctctcctcagcatccgcggctcc
ctcttctccccccggaggaacagccgcgccagcctcttcagcttccgcggccgcgcccgc
gacatgggctccgagaacgacttcgccgacgacgagcacagcaccttcgaggagagcgac
agccggcgcggctcgctgttcctgccgcgacgcctcgagcggcgctgcagcgccgtcagc
cagacgagcctcggggcgccgcgcatcgtgctgcccgccaacggcaagatgcactgcgcg
gtggactgcaacggcgtggtgtcgctggtcggcgggacgtccgtgacgacctctcccgta
ggtctcctgctgcccgaggggacgacgacggacacggagctgaagaaacgccggtcgggc
ttccgccagccgtccgcggactatttagaggagccggggggccggcagagagccatgagc
gtggccagcatcctcaccaacaccatggaagagctcgaggagtcgagacagaagtgtccg
ccctgctggtacagattcgccaacaccggtctgatctgggattgctgccccgcctggctg
aaaatcaaagacgtggtcagcacggtggtcatggacccgtttgtggatctggccatcacc
atctgcatcgtcctcaacaccctcttcatggccatggagcactaccccatgaccaaagag
ttcgacaacgtcctctccgtcggaaacctggtgttcacgggcatcttcacggcggagatg
tgcttcaagatcatcgctctggatccctactactacttccaggagggctggaacgtcttc
gacggcatcatcgtcagcctgagtctcgtcgagctcggcttggccaacgtcgaaggcctg
tcggtgctgcgctccttcagattgctgagggtcttcaagctggccaagtcgtggcccacc
ctcaacatgctgatcaagatcatcggcaactcggtgggcgcgctgggcaacctcaccctg
gtgctggccatcatcgtcttcatcttcgccgtggtgggcatgcagctgttcggcaagagc
tacaaggagtgcgtgtgcaagatctccgacgactgcaagctgccgcgctggcacatgcac
gacttcttccactccttcctcatcgtgttccgcgtgctctgcggcgagtggatcgagacc
atgtgggactgcatggaggtggcgggccagagcatgtgcctgatcgtcttcatgatggtc
atggtcatcgggaacctggtggtcctcaacctcttcctggccctcctcctgagctccttc
agcgccgacaacctggcggcgaccgacgacgacagcgagatgaacaacctgcagatcgcc
gtggggcgcatccagcggggcatcgcgttcgtcaagacgaccgtgcggcagtccctctgg
agcgtgtgctgcggcggcggcggaggcagcggcggcggcggcagcgttaagggctccgtc
ctggcggaggagatcaaaccgctggacgagctgcacagcaacggcaaaggcaactgcatc
tccaaccacacgtcggtggagatcaccaaggagcccggcggcggggtgtacccgacggag
ggcaacgggcggcccgggggcggcggcctggtggtcgggggcggcggcccggcggtcgac
gacgcggcggggaagtacccggcggaggagtgcgactacatgtcgttcatccacaacccc
agcctgacggtgacggtgcccatcgcggtgggcgagtcggacttcgagaacctgaacacg
gaagacttcagcagcgactcgtcggacgtggagggcagcaaggagaagctcgacacagag
ccccaccaccagcgtctgagctcgtcggaggggagcacggtcgacatccggccccccggg
gacggggtggactcggtggagctggagcccgaggagtccctggaccccgaggcctgcttc
acggagggctgcgtcagcaggttccagtgctgccagatcgacgaggagggcgacgagtac
aagagctggtggacgctcaggaagacctgcttcatcatcgtggagcacaactggttcgag
tccttcatcatattcatgatcctgctcagcagcggggcgctggccttcgaggacgtctac
atcgagcagcggcggaccatcaagacggtgctggagtacgccgacaaggtcttcacctac
atcttcatcctggagatgctgctgaagtgggtggcgtacggcttcgtcaagtacttcacc
aacgcctggtgctggctcgacttcctcatcgtggacgtgtccttggtcagcctcgtagcg
aacgctctgggctactccgagctcaccgccatcaaatctctgaggacgctgcgagccctg
cggcccctgagggccctgtctcggttcgagggcatgaggtcaaaaatcaaaaatgttgtg
acttcatcccgcctctctaaggtggtggtgaacgctctgctgggcgccatcccctccatc
atgaacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaac
ctgttcgcggggaagtactactactgcgtcaacaccaccagcgacgagatcttccccgtc
agcgtcgtcaacaaccgcagcgactgcatgagcctggccaacgagagcgcccgctggaag
aacgtcaagatcaacttcgacaacgtcggcgccgggtatctggctctgctgcaagtggca
acatttaagggttggatggacatcatgtacgcggcggtggactctcgaaacttggaggac
cagcccgagtacgaagtgaacttgtacatgtacctctacttcgtcatcttcatcatcttc
ggctccttcttcaccctcaacctgttcatcggcgtcatcatcgacaacttcaaccagcag
aagaaaaagttcggaggtcaggacatcttcatgacggaggagcagaagaaatactacaac
gccatgaagaagctgggctccaagaaaccgcagaaaccgatacctcgaccaacgaatgca
tttcaaggctgcgtgttcgactgcatcacgaagcaggccttcgacatcgtcatcatgatc
ttaatctgccttaacatggtgaccatgatggtggagacggacgaccagacgccggagatg
gaccagatcctctactggatcaacctggtcttcatcgtgctcttcaccggcgagggcgtg
ctcaagatgatctcgctgcgccactactacttcaccattggctggaacatattcgacttc
gtggtggtgatcctgtccatcgtcggtatgtttttatccgaagtcatcgagaagtacttc
gtgtcgccgacgctgttccgagtgatccgtctcgcccggatcggacgcatcctccgcctc
atcaagggcgccaagggcatccggacgctcctcttcgccctgatgatgtccctgccggcc
ctcttcaacatcggcctcctcctcttcctcgtcatgttcatctacgccatcttcggcatg
tccaacttcgcctacgtcaagcgggaggcgggcatcgacgacatgttcaacttcgagacc
ttcggcaacagcatgatctgcctgttccagatcaccacgtcgggcggctgggacggcctg
ctggcgccgatcctcaacaagcgggagcccgactgcgacagccagacggagcacccgggc
aacaactacaagggcaactgcggcaacccgtcggtgggcatcttcttcttcgtcagctac
atcatcatctgcttcctcatcgtggtcaacatgtacatcgccgtcatcctggagaacttc
agcgtggccacggaggagagcgccgagccgctgagcgaggacgacttcgagatgttctac
gaggtgtgggagcgcttcgaccccggcgccacgcagttcatggagtacagcaagctgtcg
gacttcgccgacgccctggacccgccgctgcgcatgcccaagcccaacatgctgcagctc
atctccatggacctgccgatggtgagcggcgagcgcatccactgcctcgacatcctcttc
gccttcaccaagcgcgtgctcggcgagggcggcgagatggacgtgctgcgcgggcagatg
gaggagcgcttcatggcgtccaacccgtccaaggtgtcctacgagcccatcaccaccacg
ctgcgccgcaagcaggaggagatgtcggccaccgtcatccagagggccttccaccgctac
ctgatgcgcctggccatgaagaaggcgtcggcgctctacaaggagcggctcaaggagggc
gtccgcgaccccgacaaggacgtcatggtcatcggcaagttcccagagaactccatctcg
gacaagacggacatgacgccgtccacggcctcgccgccctcctacaacagcgtgaccaag
tcggacgcggacaagtacgagaaggagatcagggacaaggagaacaaagggaaagactcc
aaggaccggaagaaataa
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