Embiotoca jacksoni (black perch): 138209231
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Entry
138209231 CDS
T10523
Symbol
pdgfba
Name
(RefSeq) platelet-derived growth factor beta polypeptide a
KO
K17386
platelet-derived growth factor subunit B
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04010
MAPK signaling pathway
eja04020
Calcium signaling pathway
eja04510
Focal adhesion
eja04518
Integrin signaling
eja04540
Gap junction
eja04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138209231 (pdgfba)
04020 Calcium signaling pathway
138209231 (pdgfba)
09133 Signaling molecules and interaction
04518 Integrin signaling
138209231 (pdgfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138209231 (pdgfba)
04540 Gap junction
138209231 (pdgfba)
09142 Cell motility
04810 Regulation of actin cytoskeleton
138209231 (pdgfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
eja04052
]
138209231 (pdgfba)
00536 Glycosaminoglycan binding proteins [BR:
eja00536
]
138209231 (pdgfba)
Cytokines and neuropeptides [BR:
eja04052
]
Cytokines
Growth factors (RTK binding)
138209231 (pdgfba)
Glycosaminoglycan binding proteins [BR:
eja00536
]
Heparan sulfate / Heparin
Growth factors/receptors
138209231 (pdgfba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
138209231
NCBI-ProteinID:
XP_069023778
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MRSWVLLLLLAALLAARLRLGSAEGDPLPPSLVDLVRDSPISSVEDLKLLLQQETNAIEE
DEDEHDFLTNNTHGRYIRSLVEAPPAQQAACKVRTEVMEVTRSMLDRRNANFLLWPPCVE
VQRCSGCCNTRLLQCVPTVTASRYLQVIKIQYINRKAHYDKAIISVEDHVSCRCQSPSSP
SSPSSSSSVPRSSTQTNPNPPLPPPQQQPPSSHLPLSLPRPVHPASPKTQTSKADLHRHD
DLKHNQQHYHPEEREPVARQWQQGSYTQLVHWTQPKVHQAPTHVQAGVHQTISGLLGSVS
SWPSEARAEHSVRGSTQPVGHGSGYDGSREESGVHVSTSGGEVHHPDHAQRQQQLLQHQQ
RQQYQQQYQYHHQPHYPQQYNHEGAEDQELRTQYRLNAPQSDSASPPVSPTQPSKGGENP
TPPPPTVQKDSVTSQKSTQVTNHKQTEAETVSQKEGNVREESGSANSGDSAAAELARVAN
QGKEKYSNVTSEDGRLTEAERRQKVLEMVQREPDKQTHLHPHHPQQRPKPTTFKTAFSTA
APVSPAARRAPFRPASPRRRRKHRKRISKAAMRAMIM
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagatcttgggtcctgctgctgctgctggccgcacttttagcggcccgtctgcggctc
ggcagcgctgagggtgacccgctcccgccatcattggtcgacctggtgagggactctccc
atctcctctgtggaagacctgaagctgttactacagcaggagaccaatgcaatagaagag
gacgaggatgagcatgattttctgacaaacaacacccatggtcgatacattagaagtctt
gtggaggctccgccggcccagcaggcagcctgtaaagttcgaaccgaggtgatggaagta
acgaggtccatgctggatcgccgcaatgccaacttcctgctgtggccgccatgcgtggag
gtgcagcgatgttcgggctgctgcaacaccaggctgctgcagtgtgttcccacagtcacc
gccagccgatacctgcaggtgataaagatccagtacataaacaggaaagcccactatgac
aaagccatcatctcagtggaagatcacgtgagctgcaggtgccaatccccctcatcgccc
tcttcaccttcctcctcctcgtctgtccctcgttcctccactcagaccaaccccaatccg
cctttacctccaccacaacaacaacccccatcctcccacctccccctgtcccttccccgg
cctgttcaccctgcctcacccaagactcagacctccaaggctgacctccatcgccacgac
gacctaaagcacaaccagcagcattaccaccctgaggagcgcgagccggtggcgaggcag
tggcagcagggcagttacacccagctggtgcattggactcagcctaaggtgcatcaggca
cccacacacgtgcaggcaggagttcaccagacgatctccgggctgctcggatcggtcagc
agctggccatccgaagcgagggcggagcacagcgtcaggggaagtacgcagccggtgggg
cacgggagcgggtatgacgggagccgggaggaaagcggtgtgcacgtatcaaccagcggt
ggcgaagtgcatcatcctgatcacgcacagaggcaacaacagttgttacagcatcagcag
agacagcagtatcagcagcagtatcagtatcaccaccagccgcattatccacagcagtac
aaccatgaaggagcggaggaccaagagctgaggacgcagtatcgactcaacgcccctcaa
tcagacagcgcctccccacctgtcagccccacacagccgtccaaaggaggtgaaaacccc
actcctcctccccccaccgttcaaaaagactcagtgaccagccaaaaaagtacacaggtc
acaaatcacaaacagactgaggctgaaacagtcagtcagaaagaagggaacgtgagggag
gaaagtgggtcggccaacagcggggactcggccgctgcagagctggcacgggtggccaat
caggggaaggaaaaatactctaacgtgaccagtgaggatggtcgtttaacggaggcggag
aggagacagaaagttctggagatggtacagagggagccggataagcagactcatcttcat
ccgcatcatcctcagcaaagaccaaagccaaccacatttaaaacagcattctctacagcg
gctcccgtgtcgccagcagcccgtcgggccccgttcagacctgcttcgcctcgccgcagg
agaaaacaccgcaaacggatcagcaaagcagccatgagagccatgatcatgtag
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