Eutypa lata: UCREL1_4109
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Entry
UCREL1_4109 CDS
T03103
Name
(GenBank) putative ccr4-not transcription complex subunit protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ela
Eutypa lata
Pathway
ela03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCREL1_4109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_4109
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCREL1_4109
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UCREL1_4109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_HEAT
CNOT1_TTP_bind
CAS_CSE1
Motif
Other DBs
NCBI-ProteinID:
EMR68870
UniProt:
M7TQ76
LinkDB
All DBs
Position
Unknown
AA seq
2109 aa
AA seq
DB search
MEVFPRYFTRLVAGNAPQIFPGLNRPVANPGNYSLLVGEMSKISHDLDQAGKIAEAIETA
NEDIFRDFDLSTFMEHFKLDALEKTILALAFKFGSRPDLKTKADAILSTNFPTFVNLISR
PDYGDHSDLTPSFIAAIVDRYIQGHPPNFNAPAKAELAHKVKSRWSQPDQAPPVEVLAAL
DLTRVLGEKPPNALALYIQRTGPDFTRDEEICSSYIQNRPANIQLTEEQVSAALTYTSIS
ITHPQNPSILVTALRRHLPATFSWQNAVSYFDQRDVRVSSEQFLRLYNALVPIARIQDDT
APLFDIQCMWGGSHWETPETQLSFICAFASLTPNELDASTIPGLQPTFTLDEYAQSPPEV
RERAAFAVRHPLVSGPALSAIFQVALHSLHASQSIEAKRLFQEVVVPNLDIFIVSAFGVP
KPWPPMAVETLASLFDNFLHRRTDHHNFVLDSLWRKDKDWVQQRLVDAHALRPLDLTLIF
EHVIKHGWLDELVYLPSGFGYDLAALAHAEGYLDLAQWARNNADRGTDISRSLLQFLMIK
ANLELQYQRPSEGQAGQKTSTTLQVKTVSAMLQILEDFMPRSPVQELILVQRLCITSYPR
LINYGEGFDDIIDANGKDGNSLPQAAINTMEEHYKKMYGDETEVKIVVQKLEEYKRSRDP
LDQDVFACMIHGLFDEYSHFVDYPLEALATTAVLFGGVISHKLISELPLKIGLGMILEAV
RDHVPDHSMYKFGLQALMQLFSRFREWPGFCRQLLQIPGLQGTEAWRKAEEVIHETEDER
ARNQNGTTPASHIGSESLVNGTTDGSEVHTVPFSAIKIDPAPPGVVFEDPVVDIQDKVQF
GLNNLTNSSLQTTFREICEVLDERHQQWFASHLVEERAKMQPNYHPVYLELVRLFEHQGL
WSEVLRQTYISVARMLNSDSTTQNSTERTHLKYLGAWLGLLTIARDKPIRHRNIAFKQLL
IEAHDTKRLLVVVPFVCKVLIQAARSNIFRPPNPWLMDIIHLLIELYHHGDLKLNQKFEI
EVLCKDLNLDHKSIEPSRELEDRVQAEEVGDIAVPDHLDQYEDLSINGMASAVPAGLSPH
AMPITIPDISTHLTIPPVNEMVINAQRLQDIVRTAVTRALQDIIQPVVDRSVTIAAISTQ
QMIRKDFATEPDENRLRTSAINMVKATAGSLALVTSKEPLRANITNSMRALANELPSPLP
EGTIIMCVNSNLDLACSIIEKHAEERAVPEIEDMIQEELENRRRHRQQRPNEPYVDQGLS
RWAMTIPHPYKLSPSMNGLNPEQMAIYEDFARQPRGAAQTSVSHAASASDATRNIANEVL
QDQYSSVPNLPTPAETPQIPHLNPQLPYSHVHAGMTNGRPSTHPVPGDGRALSDRIQKLL
AELERYANECSEEHFRDLPRGNQLQDAADTFTQVVISQESEEFALYAADQICQLLFNDKF
GHTLFLESLVHILENLLKIFASFGTTLQDRVQSNMYKQTSSQILRIPLISALLPTDLLDL
QQVDRMMASTLVAREEGQLDIFEQLLDLTLFNDRPVALFADFVRSLHASWEWINEEPDLE
VSQRLKSKFLGSGIPKPSSESLQDSDVEQQDMFDYILDEWARLVSNENATDKSMTAFIKQ
LRTKEVVANKDDFLVFLRRAIDLSVIHYEQVLLIGGTTADAFTHVDALVRLIAMFAKDST
VELDDPKAGLLPILEAVLAIVTVVLNHHHLIQGEHFCQRVFFRFFSMLMHSMETIFADIP
DTCRKDFLMRLAETFLLLSPQRFPGFAYGWLSLISHRRFLPDLLLMEARRGWQPFTKILV
SLLAYVCEHVKAIDVPDLIKEYYRGTMKFMILLQHDFPDYMAANYMRLAATVPHHCRQLR
NIILNSSPRSEAEVAAIDTEVPDSCISYLRDTGMLEVLDQLIQAGPSEDAIAHLTRAISR
NDVNDTTFGNVPLGTDLQLVDDIVTFIGGHAISRYQQEGPLFAPSAADMATLSLLVHELQ
PEARYYLLGSIVDRLRYPSPLTEYFTLVLLDIFGHDINDPEEVDIRQQIVRILLERFSGF
WPQPIGLVRIMAELVKDDKYMFFDQPFIKADRESNLSILAVDYSKTSYFDDMDAFMMMNS
QRPTLHDFA
NT seq
6330 nt
NT seq
+upstream
nt +downstream
nt
atggaagttttcccaagatacttcacccgcctggtggcaggcaatgcccctcagatattc
cccggtctcaatcggccggtagccaatcctggcaactactccctcctagtaggtgagatg
tcaaagatctcccatgaccttgaccaagccgggaagatcgccgaggctatcgaaactgcc
aatgaagatatattccgcgactttgatttatcaactttcatggagcattttaagcttgat
gccttggaaaagaccatcttagccctggcgttcaagtttgggtcacggcctgaccttaaa
acgaaagccgatgcgatcctatccaccaacttccctaccttcgtcaaccttatatcgcgg
cctgattatggcgatcattccgaccttaccccttcctttatagccgccatagtcgaccgc
tacatccagggccaccctcctaacttcaatgcccctgctaaggcagaacttgcgcataaa
gtgaagtctcgatggtcacaacccgaccaagcaccgccggtagaggtcttggctgccctg
gacttgacccgtgtcctgggtgagaagccacctaatgcgctggcgctttatattcagaga
accggtcccgacttcacccgtgacgaggagatatgttctagttatattcaaaatcgcccg
gccaatattcagttgacagaagagcaggtctctgccgctctgacatatacgtctatcagc
atcactcatcctcagaatccttccatactagttactgccctccgccgtcatcttcctgct
acctttagttggcagaacgctgtgtcctacttcgatcaacgcgacgtacgcgtgtcttcg
gaacaattcctccgattgtacaatgctctggtaccaattgctagaattcaagatgacact
gcacctctgttcgatattcagtgtatgtggggaggatcgcattgggagacaccagagact
cagctatccttcatatgcgcctttgcatccctgacacctaacgagctcgacgccagtaca
attccaggcctacagccgacgttcacgttagacgaatatgcacagtcccccccagaggtt
cgagagcgggctgctttcgctgtgcgacatcctctcgtctcggggcctgccctgtcggca
atcttccaggtggctctacattcgctccacgcatcgcaaagcatcgaggctaagcgcctg
tttcaagaggtcgtggtgcctaacctagacatttttatagtctctgcgtttggtgttcct
aagccatggccacccatggcagttgaaaccctggcctcactctttgataacttcctccat
cggcgtactgatcaccacaacttcgtcttggatagcctatggaggaaggataaggattgg
gttcagcaaagactagtggatgcccacgccctgagacccttggatctgacgctgatcttt
gaacatgtcataaagcatggttggctagacgagcttgtatatctgccctctgggtttggt
tatgacctcgcagcgttagcacatgctgaaggctaccttgacctagctcagtgggcccgt
aataatgctgaccgtggcactgatatctctcggtccctcttgcagtttctcatgatcaag
gcgaaccttgagctgcaataccagaggccttcggagggtcaggctggacagaagactagt
actactcttcaggtcaagactgtgtctgctatgctgcagatactggaagattttatgcct
agaagccctgtgcaggagttgatcctagtccagcggttatgtataacgtcgtatccacga
ctgatcaactacggggagggcttcgatgacattatcgatgcgaatggtaaagatggcaat
agtcttcctcaagccgccatcaacacgatggaggaacactacaaaaagatgtatggggat
gagaccgaagtgaagatcgtggttcagaaactagaagagtacaaacgatctcgtgatcct
ctagatcaggatgtattcgcctgcatgatccacggcttgtttgacgaatattcgcacttc
gttgactatccgctggaggccttagctacaacagcagttcttttcggtggcgtcatttct
cacaagcttatctccgagctccccctcaaaattggcctaggcatgattctggaggctgtc
agagatcatgtccctgatcattccatgtacaaattcggtctgcaggctcttatgcagctc
ttctcccgcttcagagagtggcctggattttgtaggcagctgctgcagattcctggactt
caaggtactgaggcttggcggaaagccgaggaggtcatccatgaaaccgaggatgaaagg
gcgcgcaaccagaatggtacgacgccggcgagtcatattggcagcgagtcgttagtcaat
gggactaccgatggctccgaggttcataccgtcccgttctctgcaatcaagatcgacccc
gcgcctccgggcgtcgtctttgaggatcctgttgttgacattcaagataaagtccagttt
gggctcaacaacctgaccaattcatcccttcagacgaccttcagggagatatgcgaggtg
ttagatgagcgccatcagcagtggtttgctagccacctcgttgaggagcgagccaagatg
cagccgaattatcatccagtgtatcttgaactcgtgaggctttttgagcatcaagggctc
tggtctgaggtgctgagacaaacctacattagcgtagcacggatgttgaactccgacagc
acaactcaaaactcgacggaacgaacccatctcaaatacttgggggcttggcttggtcta
ttgactattgctcgagataaacctatcaggcatcggaacatcgccttcaagcaattatta
atcgaagcccatgatacgaagagattactcgtagttgtacctttcgtctgcaaggtgtta
atccaggccgccagatcaaatatcttccgacctccgaatccatggctcatggacatcatt
cacctcctcatcgagctctaccatcatggtgatctgaagctcaaccaaaagtttgaaatt
gaggttctctgcaaggatctcaacctcgatcataaaagcatcgaaccgtcccgggagctg
gaggaccgggtgcaagctgaagaggtgggcgacatcgcggtccccgatcacctggaccag
tatgaggatttgtctatcaacggcatggccagcgctgtcccggcaggcttgtcaccacat
gcgatgcccatcacgatcccggacatcagtactcatctcactattcctcctgtcaacgag
atggtgattaacgctcaacgtctacaagacatcgtccgcacggccgtcacgcgagccttg
caagacattatacagcctgtagtagacaggtctgtcacgattgctgctatcagcacgcag
cagatgatacgcaaagattttgcgaccgagccggacgagaataggttgcgcacatctgcc
atcaatatggtcaaggcaacagcaggaagcttagcattggtaacctccaaggaacctctg
cgtgctaacataacaaattccatgcgagccttagccaatgagttgccttcgccattacca
gaaggcacgatcattatgtgcgttaactcgaatcttgatcttgcttgtagcatcatcgaa
aaacatgctgaagaaagggcggttcctgaaattgaggatatgatccaagaggaactggag
aaccgccggcgccaccgacaacagaggcctaatgagccttatgtagatcaaggtctaagt
cggtgggccatgaccattccacacccttacaagctctcgccaagcatgaatggcttgaac
ccggaacagatggccatctacgaggacttcgcaagacagcctcgaggtgccgctcaaacc
agcgtaagccacgccgcgtctgcttcagacgcgactaggaacattgcgaacgaggtcttg
caggatcagtacagctcagtgccaaacctcccaacgccggccgagacaccacagatccca
cacctcaatccgcaacttccttattctcacgtgcatgcagggatgactaacggtcgccct
tctactcaccccgtccccggcgatggtagagctctctccgaccggattcagaaacttctc
gctgagcttgagcggtatgcaaatgagtgttccgaagaacactttagggacctgcctaga
ggtaatcaattgcaagatgcagcagacaccttcactcaggtggttatcagccaagagtcg
gaagaattcgctctgtacgccgcggatcagatttgccagctcctgttcaatgataaattc
ggccacacgttattcctcgagagcctcgttcatatccttgaaaacctgttgaagattttc
gcaagtttcggcacgacgctacaagaccgggtccaatccaacatgtacaaacaaacttct
agccagattcttcggatacccttaatttctgcattactcccgactgatctattggatttg
caacaagtcgatagaatgatggccagtaccttagtcgcgagggaagagggacagttggat
atatttgagcaactactagatctcacactattcaatgatcggcctgttgcgctcttcgca
gatttcgtgcgtagcttgcatgcttcctgggagtggattaacgaggaacccgatctcgag
gttagccaacggttgaagtcgaagttcctcggttcgggcattccaaaaccttctagtgag
agccttcaagacagcgatgtcgagcagcaagatatgtttgattacattcttgacgagtgg
gcccgactcgtcagcaacgagaatgccacggacaagtctatgacagcgttcatcaagcag
ctccgcaccaaagaagttgttgcaaataaggatgatttcctggtatttctccgaagggcc
attgacctatctgtcattcattatgagcaggttttgctcattggaggaacaactgctgat
gccttcacgcacgttgacgctctagtcaggcttatcgcgatgttcgccaaggacagcacc
gttgagcttgacgaccctaaagccgggcttcttcctattcttgaagccgttctggccatc
gtgaccgtcgttctcaaccaccaccatctgatccaaggtgaacatttctgtcagcgggtc
ttcttccggttcttttccatgctcatgcacagcatggagacaatctttgccgatattccg
gacacctgccgcaaggatttcttgatgcggctcgcagagacattcctccttcttagcccg
cagcgttttcccggctttgcttatgggtggttatcactcatatcccatcgccgtttcttg
ccggatctgctcctgatggaggcgaggcgaggatggcagccgttcactaagatcttagta
tctttgctagcgtacgtatgtgagcacgtgaaggctatcgacgttccagatttgatcaag
gagtactatcgcggaactatgaagttcatgattctactccaacatgacttcccggattac
atggcggcaaactacatgaggctagctgcgaccgttccccaccactgcagacagttaagg
aacatcatattgaacagtagtcctcgctccgaagcggaagttgcggctatagatacggaa
gttccggattcgtgtatctcgtatcttagggatacaggcatgctagaggtcctggaccaa
ctcatccaagctggaccgtcggaggatgccattgctcatctcacgcgtgctatctctaga
aacgacgtgaacgacacaactttcggcaatgtaccgctcggcacggacctacaactagtt
gatgatatcgtgacattcatcggtggtcatgctatctccaggtatcagcaggaagggcca
ctcttcgctcctagcgctgccgatatggccacattgtctctcctcgtacacgaactacag
ccggaagctcggtactacctactaggaagcattgtagaccgtctgcgttacccgagtcca
ctgacggaatacttcaccctggtcctactagacatctttgggcatgatatcaatgaccca
gaagaagtagacattcgacagcaaattgtgcggatcttgctcgagcggttctcgggattc
tggccccagccgattggtcttgtcaggatcatggccgaattggtcaaagacgacaaatac
atgttctttgatcaaccgttcatcaaggccgaccgcgagagcaatttgtccatcttagcc
gtggactacagcaaaaccagctactttgatgacatggacgcttttatgatgatgaattct
cagcgtccgacccttcacgactttgcataa
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