Eutypa lata: UCREL1_5409
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Entry
UCREL1_5409 CDS
T03103
Name
(GenBank) putative rad50 protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ela
Eutypa lata
Pathway
ela03440
Homologous recombination
ela03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UCREL1_5409
03450 Non-homologous end-joining
UCREL1_5409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ela03032
]
UCREL1_5409
03400 DNA repair and recombination proteins [BR:
ela03400
]
UCREL1_5409
DNA replication proteins [BR:
ela03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
UCREL1_5409
DNA repair and recombination proteins [BR:
ela03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
UCREL1_5409
BRCA1-C complex
UCREL1_5409
NHEJ (non-homologous end-joining)
MRX complex
UCREL1_5409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
Snapin_Pallidin
AAA_13
AAA_22
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
EMR67595
UniProt:
M7TLJ1
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MSSIDKLSITGIRSFSTTNSQDIKFFTPLTLIVGYNGSGKTTIIECLKYATTSELPPNSA
KGGAFIHEPDLLGERSVLAKVMLKYKTPPDTTYVLSRQIQLTVKKSTRTQKTLEGSLLQI
LDGEKTTMSKQKAKLDDLVLRHLGVPKAILEFVIFCHQDESLWPMSEPSVLKKRFDEIFE
AMKYTKAIDNLKVLRKKHGEKLKSLKDQELYDKTDKEKADECRRRIERLEKEIDKMGLKC
QELQNQKEEAEIRAKELHEQANSHLNIVHELKAKKEQLHYRQDTLEETKSRMDEMTESDT
WLQDTLAQYEERVKRLQNDHQENISQYSEYQKELARLRDDMSKRLAEQGKLQSDKEKYER
QLESRVELIHQEARTHNIRGFDGDLDDRQIQSFNDRVQRLLTDKRKELERLQSENAEDLD
KKAGSISELEGRKARHIQDRVSAVQQNNTLEKRIASTRQVLNTIDIDEGAKAVLDSSFKD
IEQRFEKATQSQQDADLDTKIQEENDHLQQLENESSKLSRELAESSRLAASRGELDFHKR
KISTKKKELEALVSSSESGKISSMISTSWEPATLERQFQQALQAKAKAHEEAKGKRDEII
QVQKLVQGKVTSAKEKIRKRDNEMERSKSTVIQALKATEPESQPNVADLPDAISQLEEDI
LEEKKGLALNEALRTYYEDCQRTLNRHNKCDLCLRHFANAGETSNIIKKIRKALEEHNDG
QAQAEIAAMEQLLEKLRAARPAGENYERLGKEKSAQDKELRDAQEEECNVLRRLEDMDED
VVQKREEWQDLESISKMVREITNTHRDIEESTARVDRLMSQQQSGGTVRSGDEINDLQEA
CKEKIRAVNHRISKLTNERQYLRDQISNLELERSEFRNKISDAVRLLERKKELQAQIQTY
KEDIATQKEIIQQANKDLESIDPQIAHARTIRDDAIQRGRAKEKKIADERDSLASSVNQL
KAIDNDIQAYIDGGGPSHLASNEKATQNLKKSISNVETDMNELTARANKLKEEINNSSGN
RKNIVDNQNYRKVRREIGKLEEDIEELESRNANDDYDRLMEEVRVVERERDHLMAARGSI
VGTVKAKDDELGKLVEDWETHYHDAARKYRETHIKVETTKAAVEDLGKYSEALNNAIMRY
HALKMEEVNRITGELWRETYQGTDIDTIMIKSDSESATGRQAYNYRVCMVKQDAEMDMRG
RCSAGQKVLASIIIRLALAEAFGVGCGLIALDEPTTNLDRDNIRSLAQSLHGIIKARRQQ
SNFQLIVITHDEEFLRHMRCSDFCDYLFRVKRDESQNSIIVQEPIASIM
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcatcgacaaactatcgatcactggcatccgaagctttagcaccaccaactcc
caggatatcaagttttttacccctcttacactcatcgtcgggtacaatggctccgggaag
actaccattatcgagtgtctcaaatatgccactacgagtgagcttcctcccaacagcgcc
aaagggggtgccttcatccacgagcctgatcttcttggcgagaggagtgtcctcgccaag
gtcatgcttaagtacaagactccaccggataccacatacgtcctctcccgtcagatccag
ctcactgttaagaagagcaccagaacacaaaagaccctcgaaggctccctactacagatc
ttggatggcgagaaaaccaccatgtccaaacagaaagccaaactcgatgatcttgtcttg
agacacctcggtgtaccaaaggccatcctagagtttgtcatcttctgccaccaagacgag
tctctatggcctatgagcgaacccagcgtcctcaagaaacgattcgacgagatcttcgag
gccatgaaatacacgaaggccatagacaacctcaaggtgctacggaagaaacatggagag
aagctgaagagcttgaaagatcaggagctctatgacaagaccgacaaggaaaaagccgat
gagtgtaggcgtcgaatagagcgtctggagaaggagatcgacaagatggggctcaagtgc
caagagttgcagaatcagaaggaagaggccgaaatcagagccaaggagctgcacgaacaa
gcaaacagtcacctcaacatcgtccacgagttaaaggccaagaaagagcagctccattat
cgtcaagacacccttgaggaaaccaaatcgaggatggatgaaatgaccgagtcggatacg
tggctgcaagacacgctagcccagtacgaagagcgtgtaaaacggttgcagaacgatcat
caagagaacatatcccaatacagcgaataccagaaagaactcgctagactacgcgatgat
atgtcaaaacgactggcagagcaaggcaaacttcagtctgataaagagaagtatgagcgg
cagttggagtctcgtgtcgagctgatccatcaagaggcccgaactcacaacattagaggc
ttcgacggtgacctagacgatcgacaaatacagtctttcaatgatcgggtccaacgacta
ttaacagacaagaggaaggagttggagcgcttgcaatctgagaacgctgaagacctagac
aagaaggcaggcagcattagcgaactagagggtcgcaaagcaagacatatccaagaccgc
gtctctgcagtgcagcagaacaatacgctagagaagcgaattgcatctacgcggcaggtc
cttaatactatagatatcgatgaaggtgccaaagctgtattagactcctccttcaaggat
atcgagcaacgatttgagaaggcgacacagagccaacaagatgccgatctagacacgaaa
atccaagaggaaaatgatcacctgcaacagctcgagaacgaaagtagcaaattgtcgcgt
gaactcgcggaatcttcaagattagctgcaagtcggggagagctcgatttccataagaga
aaaatctcgactaagaaaaaggaactagaggctttggtcagcagctccgagagtggcaag
atatcgagcatgattagtacctcttgggaaccggccacgcttgagcgccagttccagcaa
gctttgcaagcgaaagctaaggcgcacgaggaggcaaaaggcaaaagagacgagatcatt
caagtccagaagcttgtacaaggaaaagtcaccagtgccaaggaaaagatcagaaaacga
gataacgagatggaacggtccaaatcgaccgtcattcaagcgttaaaggccactgaaccc
gaatctcaaccgaatgtcgccgacttgcccgatgcgatctctcaactcgaagaagatatt
ctcgaggagaagaaaggacttgccttaaatgaggctttgaggacgtattatgaggattgt
cagaggacactaaacaggcacaataaatgcgatctctgccttcggcacttcgccaatgcc
ggtgagacgtcaaatattatcaagaaaatcagaaaggcgctcgaggagcacaacgatggg
caagcccaggctgaaatcgcagcaatggagcagctcttggaaaagctacgagcagctcgc
ccggctggtgagaattacgaaaggctagggaaggagaagagcgctcaggacaaggaactc
cgtgatgctcaggaggaagagtgtaatgtacttaggcgtctcgaagatatggacgaagac
gtcgtccagaagcgtgaggaatggcaagatctagaatcaataagcaaaatggtacgagag
attacgaacactcaccgcgacatcgaggagtctacagcccgagtcgaccgactcatgtct
caacaacaatcaggcggcacagtcagaagcggtgacgagatcaacgacctgcaagaggcc
tgcaaggagaagatacgcgcagtaaatcacaggatctccaagctcaccaatgaacggcaa
tatcttcgagatcagatatctaacctagagcttgagcgaagtgaattcagaaataagatc
agcgatgctgttcggctccttgagaggaagaaggaacttcaggcccaaatccaaacatat
aaggaggacatagctacgcaaaaggagatcatccaacaagccaacaaagacttggaatct
attgatcctcaaatcgcccatgcaagaacaattcgcgatgacgccatacagaggggtcgg
gcgaaggagaagaaaattgcggacgaacgcgacagccttgctagctccgtgaatcagctc
aaggcgatagacaacgacattcaagcctacatcgacggtggcggcccgtcccatttagcc
tccaacgagaaagcgacacagaacctgaagaaaagcatctctaatgtcgagactgatatg
aatgaactgactgcacgcgcgaacaagctcaaagaggagatcaacaacagttctggcaac
agaaagaacatcgttgacaatcaaaactaccgcaaggtccgtcgtgagatcggaaagcta
gaagaggacatcgaggagctcgagtcccgcaacgcgaacgacgactacgaccgcctcatg
gaggaggtgcgggtggtggagcgcgagcgggaccatctcatggcggcacgcgggtcgata
gtcggcacagtgaaggccaaggacgacgagctgggcaagctggtcgaggactgggagacg
cactaccacgacgcggcgcgcaagtaccgcgagacgcacatcaaggtcgagacgaccaag
gcggccgtcgaggacctcggcaagtacagcgaggcgctcaacaacgccatcatgcggtac
cacgcgctcaagatggaggaggtgaaccgcatcacgggggagctgtggcgcgagacgtac
cagggcacggacatcgacacgatcatgatcaagtcggacagcgagtcggcgacggggcgg
caggcgtacaactaccgggtgtgcatggtgaagcaggacgcggagatggacatgcggggg
cggtgctcggcggggcagaaggtgctggcgtccatcatcatccggctggcgctcgccgag
gcgttcggcgtcggctgcggcctcatcgcgctcgacgagcccaccaccaacctcgaccgc
gacaacatccgctccctagcccagagcctgcacggcatcatcaaggcccgccgccagcag
tccaacttccagctcatcgtcatcacccacgacgaggagttcctccgccacatgcgctgc
tccgacttctgcgactacctcttccgcgtcaagcgcgacgagagccagaacagcatcatt
gtgcaggaacccattgctagtatcatgtaa
DBGET
integrated database retrieval system
