Erythrobacter litoralis HTCC2594: ELI_08060
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Entry
ELI_08060 CDS
T00315
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eli
Erythrobacter litoralis HTCC2594
Pathway
eli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ELI_08060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eli03021
]
ELI_08060
03400 DNA repair and recombination proteins [BR:
eli03400
]
ELI_08060
Enzymes [BR:
eli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ELI_08060
Transcription machinery [BR:
eli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ELI_08060
DNA repair and recombination proteins [BR:
eli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ELI_08060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ABC63704
UniProt:
Q2N9D7
LinkDB
All DBs
Position
complement(1670077..1671132)
Genome browser
AA seq
351 aa
AA seq
DB search
MSVNTKNWQELKKPTQLDVKESSDKARKATFIAEPLERGYGLTLGNALRRVLLASLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPAEVKAGDI
AVSGDIEVMNKDLVICHLDEGATLNMELTADIGSGYVPAVQNRPADAPIGLIPVDSLYSP
IRQVSYKVEKARVGQELDFDKLSLTIETDGTVTPEDAVAYAARILQDQLTLFVHFEDGIP
QPQSAMIGVAAEPQQDDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaacaccaagaactggcaggaactcaagaaacccacgcagctcgacgtcaag
gagagcagcgacaaggcccgcaaggcgaccttcatcgccgagccgctcgagcgtggctac
ggccttacgctcggcaacgcactgcgccgggtcctcctggcctcgctccagggcgctgcc
atcacctcgatcaagatcgagaacgtgctgcacgaattcagctcgcttgccggcgtgcgt
gaagacgtgaccgacatcgtcctcaatgtgaagcagatcgctctgaagatggaaggcgaa
ggccccaagcgccttcagctttccgccaccggcccggccgaagtgaaggccggcgacatc
gcggtttcgggcgatatcgaagtgatgaacaaggatctcgtgatctgtcatctcgacgaa
ggcgcgacgctcaacatggaactgactgccgatatcggcagcggctatgtcccggcggtc
cagaaccgtccggccgatgcgccgatcggcctgatcccggtcgacagcctctattcgccg
atccgtcaggtcagctacaaggtcgaaaaggcccgtgtcggccaggagctcgacttcgac
aagctgagcctgaccatcgaaaccgacggcaccgtcacccctgaagatgccgtggcctat
gcggcgcgcatcctgcaggaccagttgacgctgttcgtccacttcgaagacggtatcccg
cagccgcagagcgccatgatcggcgtcgctgccgagccgcagcaggacgatgccaaccag
ctcaatcgttacctcctcaagaaggtcgacgagctggaactgtcggtccgctcggccaac
tgcctcaagaacgacaacatcatctatatcggcgacctggtccagaagaccgaagccgag
atgctgcgcacgccgaatttcggtcgcaagtcgctcaacgagatcaaggaagttctctcc
agcatgggtctgcgcctcggcatggacatccccggctggccgcccgagaacatcgaggaa
atggccaagaagctggagcaggaattactcgggtaa
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