Enterovibrio litoreus: AB8599_00730
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Entry
AB8599_00730 CDS
T11507
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
elit Enterovibrio litoreus
Pathway
elit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
elit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB8599_00730 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elit03021
]
AB8599_00730 (rpoB)
03400 DNA repair and recombination proteins [BR:
elit03400
]
AB8599_00730 (rpoB)
Enzymes [BR:
elit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB8599_00730 (rpoB)
Transcription machinery [BR:
elit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB8599_00730 (rpoB)
DNA repair and recombination proteins [BR:
elit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB8599_00730 (rpoB)
BRITE hierarchy
Other DBs
NCBI-ProteinID:
XKY36555
LinkDB
All DBs
Position
I:151221..155246
Genome browser
AA seq
1341 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFEKFIEQDPEGQYGLEAAFRSVFPIQ
SYNGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVMFDRDAPAGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDAVYVRIDRRRKLPASIILRALEYTTEQILDLFFDKIVFEVQGKSLVME
LVPDRLRGETASFDIEANGKVYIEQGRRITARHIRQLEKDGVEKIEVPVEYIVGKVSARD
YVNEETGEIIAPANQELSLETLALLSQAGYKKIETLFTNDLDNGPYMSDTLRIDSTSDRL
SALVEIYRMMRPGEPPTREAAEQLFESLFFSEDRYDLSAVGRMKFNSSLNREEMTGSGVL
SHDDIIQVMRKLIDIRNGIGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDAIMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHATHYGRLCPIETPEGPNIGLINSLSAYARTNPYGFLETPYRKVVDGKVT
DQIDYLSAIEEGQFVIAQANAVLNEDGSFGEELITARQKGDSGLHPRDHVQYMDVATNQI
VSVAASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGIERAVAVDSGVTAVAKR
GGMVQSVDASRIVIKVNEDELVSGEAGIDIYNLTKYTRSNQNTCINQRPTVMPGEPVARG
DVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRLTTIHIQELSCVA
RDTKLGSEEITADIPNVGEAALSKLDESGVVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTIIDVQVFTRDGVEKDKRALEIEEMQLKEAKKDL
TEEFSILEGGLVARVRGVLAQAGYSQEKLANMDRQSMLTQTIDDEALQTQLEQLAEQYDE
LKSDFDKKFDTKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PVEDMPYDETGEPVDIVLNPLGVPSRMNIGQILETHLGLAAKGIGNKINKMLKEQQELAK
FREFLQKVYSLGDTRQQVDISALSDDEVRTLIQNLRAGLPIATPVFDGAPESSIKELLKL
GDLPESGQLNLFDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGG
KAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPE
SFNVLLKEIRSLGINIELEDE
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcttataccgagaaaaagcgtatccgtaaggattttggtaagcgtcctcaa
gttctggacgtgccatacttgctgtctatccagctagattctttcgaaaaatttatcgag
caggatccagaagggcaatacggtcttgaagctgcttttcgctctgtctttccgattcag
agttacaacggcaattccgagctgcaatacgttagctatcgtctcggtgagccagtattt
gatgttaaagaatgtcagatccgtggcgtaacttactctgccccactgcgcgtaaaatta
cgcctagtgatgtttgacagagatgcacctgctggcaccgtaaaagacattaaagagcaa
gaagtctacatgggtgaaattccactcatgacggacaatggtacctttgtaattaacggt
actgagagggttatcgtatcccagctgcatcgtagcccgggcgtcttcttcgacagcgat
aagggtaaaacccattcctcaggtaaagtgctgtacaacgcacgtatcattccataccgc
ggttcgtggttggactttgagtttgatcctaaggatgccgtctacgttcgtatcgaccgt
cgtcgtaagcttcctgcatcgatcattctgcgtgcattggaatacaccaccgagcaaatt
cttgatttgttcttcgataaaatagttttcgaagttcaaggcaagtctctggtgatggaa
ctggtaccggatcgtcttcgtggcgagaccgcaagctttgatatcgaagctaacggcaag
gtatacatcgaacaaggccgccgcattaccgcgcgccacattcgtcagcttgaaaaagat
ggcgtagaaaaaattgaagttcctgttgagtacatcgtgggcaaagtgtctgcacgcgat
tacgttaatgaggaaacaggcgagatcattgctccagctaaccaagaactaagcctagaa
actctggcgcttctttcacaagctggttacaagaagatcgaaactttgttcaccaatgac
ttggataatggtccgtacatgtcagataccctgcgtatcgacagcacgtctgatcgtctg
agtgcgttggttgaaatctaccgcatgatgcgccctggtgagccaccaacgcgtgaagca
gcagagcagctttttgaaagcctgttcttctcagaagatcgttacgatctgtcagcggta
ggccgtatgaagttcaacagttctctaaaccgcgaagaaatgaccggttcaggcgtactg
agccatgatgacatcatccaagtgatgcgaaagcttatcgatatccgtaatggtatcggt
gaggtggacgatatcgaccaccttggcaaccgtcgtatccgttctgttggtgaaatggca
gagaaccagttccgtgtaggtctggtacgtgttgaacgcgcggtaaaagagcgcctaagc
cttggtgaccttgatgcaatcatgcctcaagatctgatcaacgctaagcctatttctgcg
gcagtaaaagagttcttcggttcttctcagctgtcacagtttatggaccagaataacccg
ttgtcagaagtgacgcacaagcgtcgtatctctgcattgggtccaggcggtctgacgcgt
gagcgcgcaggctttgaagttcgagatgtacacgcaacccactacggtcgcctatgtcct
atcgaaacgcctgaaggtccaaacatcggtctgatcaactcgctttcagcgtatgcgcgt
actaacccgtacggcttcctggagacgccttaccgtaaagttgttgacggtaaagttacg
gatcaaattgattacctttctgctatcgaagaaggccaatttgttattgcacaggctaac
gccgtgctgaacgaagatggttcattcggtgaagaattaatcactgctcgccagaaaggc
gattcaggtttgcacccacgtgaccatgtccagtacatggacgttgcgaccaaccagatt
gtatctgttgcggcatccctgatcccattcctagagcacgatgatgctaaccgtgcactt
atgggtgcgaacatgcaacgtcaggcagtaccaactctgcgcgctgataagccgctggta
ggtactggtattgaacgtgctgtagcggttgactcgggtgtaactgccgttgccaaacgt
ggcggtatggttcagtcggttgacgcatcacgtatcgttattaaggttaatgaagacgag
ctggtttctggtgaagcgggcatcgatatctataacctgacgaagtacacccgttctaac
cagaacacctgtatcaaccagcgtccgactgtgatgcctggtgagccagttgcacgtggt
gacgtgttggctgatggtccttcaacggatctgggtgaactagcacttggccagaacatg
cgtatcgcgttcatgccttggaacggttacaacttcgaggactccatccttgtatctgag
cgtgtagtacaggaagaccgcctgactaccatccacatccaagagctttcttgtgtggcg
cgtgatactaaactgggtagcgaagaaatcactgctgatatccctaacgtgggtgaagct
gcgctgtctaaacttgacgaatctggtgttgtatacatcggggcggaagtgaaaggcggc
gatattctggttggtaaagtaacgcctaaaggcgaaacacagctaacaccagaagagaaa
ctgctacgtgcgatcttcggtgagaaagcgtctgacgtgaaagactcttctctgcgcgtt
cctaacggtgtatctggtacgatcattgacgtacaagtattcacccgtgatggcgttgag
aaagacaaacgtgcgcttgaaatcgaagaaatgcagctcaaagaagccaagaaagatctg
acagaagagttctctattctggaaggtggtctggtagcacgtgttcgtggcgtacttgcg
caagcaggctacagccaagaaaaactggcgaacatggatcgccagagcatgctaactcag
actattgacgacgaagcgctgcaaactcagcttgagcaattggctgagcagtacgacgaa
ctgaaatcagattttgataagaaatttgacaccaaacgtcgcaagatcactcagggtgat
gatttggcaccgggcgtccttaagattgttaaggtatacctggctgttaagcgtcgcatt
caacctggtgataagatggcgggtcgtcacggtaacaagggtgttatctctaagattaac
cctgttgaagacatgccgtacgacgaaactggtgagccagtagacatcgtattgaaccca
ctgggtgtaccgtctcgtatgaacatcggtcagatccttgaaacccaccttggcctagcg
gcgaaaggtatcggtaacaagatcaacaagatgcttaaagagcagcaagaattagcgaaa
ttccgtgagttcctgcagaaggtttacagcctgggtgacacacgtcagcaagtcgatatc
agcgctctgtctgatgacgaagtgcgtacactgatccagaacctgcgtgccggtctaccg
atcgcgactccagtgttcgatggtgcgcctgagtcttcaatcaaagaactgttgaagctg
ggtgatctgccagaatctggtcagttgaacctatttgacggccgtactggtgagaagttt
gagcgtcctgtaactgtcggttacatgtacatgctgaaactgaaccacttggttgatgac
aagatgcacgcccgttctaccggttcttacagcctagttactcagcagccgctgggtggt
aaagctcagttcggtggccagcgtttcggtgagatggaagtgtgggcgctagaagcatac
ggcgcagcatacacccttcaagaaatgctgactgttaagtcggatgacgtgaacggtcgt
acgaagatgtataagaacatcgtcgacggcgatcaccgcatggagccgggtatgccggaa
tctttcaacgtattgttgaaagaaatccgctcgttgggtatcaacatcgagctggaagac
gaataa
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