Escherichia coli P12b: P12B_c1334
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Entry
P12B_c1334 CDS
T02030
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
elp
Escherichia coli P12b
Pathway
elp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P12B_c1334 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elp03400
]
P12B_c1334 (xthA)
Enzymes [BR:
elp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
P12B_c1334 (xthA)
DNA repair and recombination proteins [BR:
elp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
P12B_c1334 (xthA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AFG40199
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All DBs
Position
complement(1443475..1444293)
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AA seq
272 aa
AA seq
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MAATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFY
HGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESR
DHPIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGK
CSFLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQP
LAECCVETGIDYEIRSMEKPSDHAPVWATFRR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgactatgaaatttgtctcttttaatatcaacggcctgcgcgccagacctcac
cagcttgaagccatcgtcgaaaagcaccaaccggatgtgattggcctgcaggagacaaaa
gttcatgacgatatgtttccgctcgaagaggtggcgaagctcggctacaacgtgttttat
cacgggcagaaaggccattatggcgtggcgctgctgaccaaagagacgccgattgccgtg
cggcgcggctttcccggtgacgacgaagaggcgcaacggcggattattatggcggaaatc
ccctcgccgctgggcaatgtcaccgtgatcaacggttacttcccgcagggtgaaagccgc
gaccatccgataaaattcccggcaaaggcgcagttttatcagaatctgcaaaactacctg
gaaaccgaactcaagcgtgaaaatccggtgctgattatgggcgatatgaatatcagtcct
ggcgacctggatattggcattggcgaagagaaccgtaagcgctggctgcgtaccggaaaa
tgttctttccttccggaggaacgcgaatggatggagagactgatgagctgggggttggtc
gataccttccgccatgctaatccgcaaacagcagatcgtttctcatggtttgattaccgc
tcaaaaggttttgacgataaccgcggtctgcgcatcgacctgctgctcgccagccaaccg
ctggcagaatgttgcgtagaaaccggcatcgactatgaaattcgcagcatggaaaaaccg
tccgatcacgcccccgtctgggcgaccttccgccgctaa
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