Erythrobacter litoralis DSM 8509: Ga0102493_112617
Help
Entry
Ga0102493_112617 CDS
T04740
Name
(GenBank) RNA polymerase primary sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
elq
Erythrobacter litoralis DSM 8509
Pathway
elq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
elq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ga0102493_112617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elq03021
]
Ga0102493_112617
Transcription machinery [BR:
elq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ga0102493_112617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AOL23628
UniProt:
A0A074MZS3
LinkDB
All DBs
Position
1736094..1738127
Genome browser
AA seq
677 aa
AA seq
DB search
MASTAKTQDDDAPLIDLNEASVKKLISKAKKKGYVTYDELNEALPSGEMSPDQIEDIQTA
LSEMGVQIVENDEEAEAEAEAEAEVEEMAVDEDDDEDVDAKKAKKETKTAAKKTGTGERT
DDPVRMYLREMGAVELLSREGEIAIAKRIEAGRDMMIMGLCESPITFHAIIQWSEALNNE
DMQLREILDLDAMLSKEPPADKMAEDADDDDGEISEETAGPTIRDDDEDDSDDESEEDED
GEGGSSKREEDDEEDNTLSLAQMEAALKPEAIERFARITKLFNSFEKLQAERVDTLAAGG
EFPKAKEKKYEELGEQLTAEVESMQFHATKIEFLVDNLYAFNRRLTALGGQMLRLAERHK
IKRIDFLKGYVGNELDDGWIREKAKKDKKWAAFLDKEADAIERIRVEIADIASQTGMALP
EFRRIVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAV
DKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQFLHEEGR
EPTPEEMAARLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAVIPVDAAI
QANLKETVTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALR
KLKHPSRSRKMRSFLDQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaccgcaaaaacccaggacgatgacgccccgctgatcgacctcaacgaggca
tcggtcaagaaactcatcagcaaggcgaagaagaagggctacgtcacctatgacgagctc
aacgaggcgctgccatcgggcgagatgagccccgaccagatcgaggacatccagaccgcc
ctgtcggaaatgggcgtccagatcgtcgaaaacgacgaggaagccgaagcggaagccgag
gccgaggccgaagtcgaggaaatggccgtcgacgaggatgacgacgaggacgtcgacgcc
aagaaggccaagaaggaaacgaagaccgccgccaagaagaccggcacgggcgaacgcacc
gatgacccggtgcggatgtacctgcgcgaaatgggcgcggtcgaactcctgagccgcgag
ggcgagatcgccatcgccaagcgtatcgaggccgggcgcgacatgatgatcatggggctt
tgcgaaagcccgatcacgttccacgccatcatccagtggtccgaggcgctcaacaacgag
gacatgcagctgcgcgagatcctcgatctcgatgcgatgctgtcgaaggaaccgccggcc
gacaagatggccgaggatgccgacgacgatgacggcgagatctccgaggagaccgcgggc
ccgacgatccgcgacgacgacgaggatgacagcgacgacgagagcgaggaggacgaggac
ggcgaaggcggctcgtccaagcgcgaagaggacgacgaggaggacaacaccctctcgctc
gcccagatggaagccgcgctgaagccggaagcgatcgaacgcttcgctcgcatcaccaag
ctgttcaattccttcgagaagctccaggccgaacgggtcgacacgctggcagccggcggc
gaatttcccaaggccaaggaaaagaaatacgaggaactcggcgaacagctcacggccgag
gtggaatcgatgcagttccacgcgaccaagatcgaattcctggtcgacaacctctacgcc
ttcaaccgccgcctgaccgctctcggcggccagatgctgcgccttgccgagcgtcacaag
atcaagcggatcgacttcctgaaaggctatgtcggcaacgagctcgacgatggctggatc
agggagaaggcgaagaaggacaagaagtgggccgccttcctcgacaaggaagccgacgcg
atcgagcgcatccgggtcgagatcgccgatatcgcctcgcagaccgggatggcgctcccc
gaattccgccgcatcgtgaacatggtccagaaaggcgagcgcgaggcgcgcatcgccaag
aaggaaatggtcgaggcgaacctgcgcctcgtcatctccatcgccaagaaatacaccaac
cgcggcctgcaattccttgatctcattcaggaaggcaatatcggcctgatgaaggcggtc
gacaagttcgagtatcgccgcggctacaagttcagcacctatgcgacatggtggattcgg
caggcgatcacccgatcgatcgccgaccaggcccgcacgatccgcattccggttcacatg
atcgagacgatcaacaagctggtgcgcacctcgcgccagttcctccacgaggaaggccgc
gagccgacccccgaggaaatggccgcgcggctttccatgccgctcgaaaaggtgcgcaag
gtgatgaagatcgccaaggagccgatcagcctcgaaacgcccatcggcgacgaggaagac
agccacctcggcgatttcatcgaggacaagaacgcggtcatcccggtcgatgccgcgatc
caggccaatctcaaggaaacggtcacccgcgtccttgcgagcctgaccccgcgcgaggaa
cgcgtgctgcgcatgcggttcggcatcgggatgaacaccgatcacacactggaggaggtc
ggtcagcaattctcggtcacgcgcgaacgtatccgccagatcgaggcgaaggctctgcgc
aagctcaagcacccgtctcgttcgcgcaagatgcgctccttcctcgaccagtaa
DBGET
integrated database retrieval system
