Esox lucius (northern pike): 105005947
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Entry
105005947 CDS
T04894
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
els
Esox lucius (northern pike)
Pathway
els04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
els00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
105005947
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105005947
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105005947
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
105005947
NCBI-ProteinID:
XP_028969781
LinkDB
All DBs
Position
LG02:complement(38238393..38417044)
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AA seq
1323 aa
AA seq
DB search
MFSWVVKVVPQPPEPPGKLGDEKTSASPAPVKQVKFKEEKKQEAPKPAETKEEVAEENGG
QAGVLTWITHGLASSLPQPAGTPRLGRANTECSNNQDDNSTQEQGSGVLGWIAQGLASVV
PQPDSKYLEGGEPEEITETAEVSKVQEVKEQTSVHAIQDLPDAEPLPHIPVVEVVSEEEP
EEEKGIPPRVIEWLKQGFEKVVPQPTDINKDISVKAVCTQKVPTAPPEAEEEAKPNEMEK
QPNVVGWIVHGFGRILPQPVLTPGGSENVETVQNMHILQAQTDMILEDVDPNWEKENKEK
SKSCDQEAQGAAQLKAMPSLVPQVLFMEQGAEDAETQTERWTPIMEIIKKEAEEAAMAKV
EEKLQQQLKEARMAEEMARQAAEMAVKQLEEEQASSTQRATDSLLEAEGEQLPNIQEEEN
EDDTEVDLKRCLLDVCPAEGLPDPSQSKAEAEDEPVEPSAPATPPREAFPEPEPQTELPQ
KQAPPATEGQAVTIQPELANQKCLPTASPRQEGEVAEDGGRGEGESSNSMKSSMLISNIQ
SVREDRRGSMLPAVKVEDVDKDVVSEGICNIPQIINSQESLAVTLTVHLAPMTQHSSLLQ
VVEERSSEDEVSAIDDLEMQTSLRTVDDENRQASTASYGTVVAQERMASLVKLFKARTVR
KKERLADPDDSEEDSPHASPAKAPPPPTPPPPEEEKKDILMEEEVAEDDDYWEVYGYLIK
VPKFPKLAPLPSWLQTILDYRFPSSIDPYTDMVYVVWLFFVMMAWNWNVWLIPVRWAFPY
QTAENIHWWLLMDYTCDLIYITDILIFQPRLQFVRGGDIVCDKKDMRDNYMTTERFKMDC
ISMFPMEIFYYFTGVNSLLRFPRLLKYMAFFEFNDRLEAVMKKAYIYRVILTTSYLLYSL
HINACLFYWGSDYEGLGSTKWVYDGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEITFQL
VNYFVGVFAFSIMIGQMRDVVGAATAGQNYYRACMDNTIKYMTSYHIPKEVQNRVKTWYD
YTWQIQGMLDEQELLVQLPDKMRMDMAVDVNYSIVSKVALFQGCDRQMIFDMLMRLKSVV
YLPGDFVCKKGEIGREMYIIKQGEVQVVGGPDLKTVFVTIRAGSVFGEISLLAGGGGNRR
TANVRAHGFANLFILDKRDLSDILVHYPESQKLLRKKAKRMLTRDIKPEEKAVGRETSQV
IPTRPETPKLFKAALVVTEQAGIKGTFTKLKEGYKPEEMKVSKKFSGPPIPPPSPMMHRC
SPIPPSHPYEEEDEDAVSETTDSTMLIRMTPRHQGEELLSVEVKPRDEKDGGEEDKSETT
TGD
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctgggtggtgaaagtggttccccagccccctgaacctcctgggaaactagga
gatgagaagaccagtgcctcgcctgcaccagtaaaacaagtcaaattcaaagaagagaag
aaacaggaagctccaaaacctgctgaaaccaaagaagaagttgccgaggagaatggtggt
caggctggagtgttgacatggattacccatggtttagctagttctcttccacagccagct
ggaacaccacggttaggcagagccaacactgagtgctccaacaatcaggatgacaacagt
actcaagagcaggggtcaggggtccttggctggattgctcagggattggctagtgtggtt
ccacagcctgattcaaaatacttggaggggggtgagcctgaggagataacagagactgca
gaggtgagcaaggtgcaagaggtcaaggaacaaactagtgtacatgcgatccaagatctt
ccagatgcagaacctcttcctcatattcctgttgtggaggttgtgtcagaagaagaacct
gaagaagagaagggaatcccacccagagtgattgagtggctcaagcagggatttgagaag
gtggttccccagccaactgacatcaacaaagatatctcagtgaaggccgtctgcacacag
aaagtgcccaccgcacctccagaagctgaagaggaggccaaaccaaatgaaatggagaaa
caacccaatgtggtaggctggattgttcacggctttggtcgcatattacctcagcctgtg
ttgactcctggtggatcggagaatgtggagactgtgcaaaacatgcacatcctgcaggcc
caaacagacatgattctggaagatgtagacccaaactgggagaaggagaacaaggagaag
tcaaagagctgcgaccaggaggcccagggagctgcccagctcaaggccatgccttcactt
gtaccccaggttctttttatggaacaaggagcagaggatgcagaaacccaaacagagcga
tggacacccataatggagatcatcaagaaagaagcagaggaggctgctatggcgaaagta
gaagagaagctgcagcagcagttgaaagaggcaaggatggctgaagaaatggctagacag
gcggctgaaatggcagtcaaacagctggaggaggaacaggcgtccagcacccagagggcc
acagactcattgctggaggctgagggagagcaactgcccaatatccaggaggaagagaac
gaggacgacactgaagtggacctgaaaaggtgcttgttggatgtgtgtccagctgagggg
ttacctgatccctcccagtccaaagctgaggcggaggatgagccagtcgaaccaagtgcc
ccagcaactcccccaagagaggccttccctgaacccgaaccacagacagaactaccccag
aaacaggctccaccagcaacagagggtcaggcagtgaccatacaaccagaattagccaac
cagaaatgtctgcctactgcctcccctcggcaggaaggcgaagttgcagaggacggagga
aggggtgaaggtgagtcatccaactccatgaaatcatccatgctgatcagtaatatacag
agtgttcgagaggacagacgagggagtatgctaccagctgttaaagtggaggatgtggac
aaagatgtggtgtcagaggggatttgcaatatccctcagatcattaactcacaggagtcc
ctggccgttactctgactgtgcatctggcccccatgacccagcacagtagcttgctccaa
gtggtagaagagagaagttctgaagatgaagttagtgctattgatgacttggaaatgcag
accagccttcggactgtggatgatgagaatcgccaagcttcaactgccagttatggcact
gtagttgcccaggagagaatggcttcactggtcaagctattcaaagcaaggactgtccgc
aagaaggaaagactggcagaccctgacgactctgaagaagatagtcctcatgcatcccca
gccaaagctccaccaccccctacacccccgcccccagaagaggaaaagaaggacattctg
atggaggaggaagtagcagaggatgatgattactgggaggtctatggttacctaatcaaa
gtacccaaatttcccaaactggccccactacctagttggcttcaaaccatattggactac
cgcttcccttccagcattgacccttatacagacatggtttacgtggtatggctgttcttt
gtaatgatggcgtggaactggaatgtgtggctgatcccggtgcgctgggcctttccctac
cagactgcagagaacatccactggtggctgttgatggactatacctgtgatctcatttac
attactgacatcctgatcttccagccccgccttcagtttgtacgcgggggagacattgtg
tgtgataaaaaagacatgagagataactacatgacaaccgaaagatttaagatggattgt
attagcatgtttcccatggagatattttactacttcactggagtgaactccctccttaga
ttcccccgcctattgaagtacatggctttctttgagttcaacgaccgtttggaagcagta
atgaagaaagcctacatctatagagtgatcctgaccacttcctacctgttgtattctctc
cacatcaatgcctgtctattctactggggttctgattatgaggggttgggatcgaccaaa
tgggtctacgatggcaaagggaacagttacatacggtgttactactttgctgtgaaaacc
ctgattaccattggtggtctaccggaccccaccacagtgtttgagatcaccttccagctg
gtcaactactttgttggtgtcttcgccttctccatcatgatcggtcagatgagagatgtg
gtgggggctgccacagccggacagaactactaccgggcctgcatggacaacactatcaag
tacatgacctcttatcacatcccaaaagaggtgcagaaccgtgtcaagacctggtacgac
tacacctggcagattcagggcatgctggatgagcaggaacttttagtccaactgccagac
aagatgaggatggacatggctgtggatgttaactactccattgtcagtaaagtggcccta
ttccagggctgtgatagacagatgatctttgacatgttgatgaggctcaagtctgtcgtc
tacctgccaggggacttcgtctgtaaaaagggtgagatcggcagggagatgtacatcatc
aagcagggagaggttcaagtggtgggaggacctgatttaaagactgtgtttgtgacaatc
agggccggctctgtttttggagaaatcagcttgcttgcagggggcggggggaaccgacgc
acggctaatgtgagggctcatggattcgctaacctcttcatcctggacaagagggatctc
tcagacatcttagtccactacccagagtctcagaaactcctccgcaaaaaggccaagaga
atgctcacgagggatattaagccagaggagaaggcggtgggtagagagacttcccaggtg
atccccacaaggccggagacccccaagctgttcaaagctgccctggtggtcacagagcag
gcaggcattaagggcacctttaccaagttgaaagaaggctacaaacctgaggaaatgaag
gtaagtaagaagttttctggacccccaatacctcctccttctccgatgatgcaccgttgc
tctcctattcccccttcccatccctacgaggaggaggacgaagatgcagtttctgagaca
actgacagcacaatgctcatccgaatgacaccccgtcaccaaggtgaggagctcctgtca
gttgaagttaagcccagagatgaaaaggacggcggtgaggaagataagtcagagacaacc
actggggattga
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