Esox lucius (northern pike): 105021514
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Entry
105021514 CDS
T04894
Symbol
aplf
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105021514 (aplf)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105021514 (aplf)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105021514 (aplf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
FHA
Nsp2_AV
Motif
Other DBs
NCBI-GeneID:
105021514
NCBI-ProteinID:
XP_010887556
LinkDB
All DBs
Position
LG09:complement(18761272..18781225)
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AA seq
513 aa
AA seq
DB search
MAGFHLVPVGGGSTPINLPEGETLLGRGPFLGVNDKRVSRHHGLLENHDGKLRIKPTHVN
PCFCQTSLDDPPQPLERDQWHRLGQGDIFSLLPGKYMYKVVAVAGEYGTLKNSQALQDEE
EAIVKTPSSPEPGDDHAVTTGQGMRGTSHTQELESELQDSLDQKKPDDELPTPATPKQAK
GVLAEAEKDQNKLKVEPKKRVLPAWMMVPVAFLTSPSTSKGAGNRGVRIATPMTNTNQVT
AKRGRATAPSSGEESEHSEAEPVPRKRIRRINSEEDEEGGVVQSKAALKARQQVKPSNFE
DSEESDHSVMEVDEDGEKRSGEDVSAANDSSPSTSGVKHSEAKNKGRDPKNAQKVSKAEH
QGSGAISGPAQSKPPLRTPCQYGKHCYRKNPFHFQECSHPGDSDYENYSEEVDEDDEADN
GDRPECPYGTDCYRKNPLHRKEYRHSKKTRAKKPVSYNNEEEDDDSGDNDSFINDESEDN
DEDSDYEPPDSDDSGKEDLERLKKEAKNFMRLK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttccacctcgtgcctgtaggtggtggcagtactcctataaacctgcccgaa
ggagagacactgctgggaaggggtccattccttggcgtcaatgacaaaagagtctccaga
caccacggcctccttgagaaccatgatggaaagctgcgcatcaaacctacacatgtcaac
ccttgcttctgtcagacctcattggacgaccccccgcagcctttggagagggaccaatgg
cataggcttgggcagggggacatcttttcccttcttcctgggaagtatatgtacaaggtg
gtggctgtggctggagaatacggaacattaaaaaacagtcaagctcttcaagatgaagag
gaggctattgttaagactccttcctctcctgaaccaggagacgatcacgctgtcactaca
ggccagggcatgagggggacatcacacacccaggaactagagtctgaactgcaagatagt
ttggaccagaagaagcccgatgacgagctacccactcctgccaccccaaagcaggcaaag
ggtgttttagcagaagcagaaaaggaccagaataagctaaaggtggagccaaagaaaaga
gtgttacctgcgtggatgatggtacctgttgcatttttgacgagcccgtccacctctaaa
ggagctggaaatagaggcgtaagaattgcgacaccaatgacgaacaccaaccaggttaca
gccaaacgagggagggctacagcgccatcatcgggggaggagtctgaacacagtgaggcg
gagccagtgcccaggaagcggataaggcggataaatagcgaggaggatgaggaaggcggg
gtggtccagtctaaagcagcattgaaagcccggcagcaagtgaagcccagcaactttgag
gacagcgaggaatcggaccactctgtgatggaggtggatgaggatggagagaagagaagt
ggggaggacgtttctgcagccaacgacagcagcccctccacaagtggagtgaagcacagt
gaagccaaaaacaaggggagggaccctaagaatgctcagaaggtcagcaaggcggagcat
caggggtcaggtgccatttcaggccctgcccagtccaaacctcctctccggacgccctgc
cagtatggaaaacactgttacaggaaaaacccatttcacttccaagaatgcagtcacccc
ggagacagcgattatgagaactattctgaggaagtagacgaggacgatgaagcagataat
ggtgaccgacccgagtgtccgtatggcacagactgctacaggaaaaaccctctccacagg
aaggaatacagacatagcaagaagacgcgagcaaaaaagccagtgtcctacaacaacgag
gaggaggatgatgactctggagacaatgacagcttcatcaatgatgagagcgaggacaat
gatgaagactctgattatgagccccctgattcagatgacagtggcaaggaggacctcgaa
agactcaagaaagaggccaagaattttatgagactgaaatga
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